FFCP PHASE1:Hg19::chr12:127757881..127757905,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:127757881..127757905,+ | |||
|id=chr12:127757881..127757905,+ | |||
|ontology_enrichment_celltype=CL:0000359!7.89e-25!32;CL:0000680!3.53e-21!57;CL:0000056!3.53e-21!57;CL:0000355!3.53e-21!57;CL:0000048!1.39e-19!430;CL:0000723!7.20e-19!436;CL:0002057!1.19e-18!42;CL:0000034!1.22e-18!444;CL:0000187!1.77e-18!54;CL:0000192!6.85e-17!42;CL:0000514!6.85e-17!42;CL:0000860!7.88e-17!45;CL:0000183!4.50e-16!59;CL:0000393!1.21e-15!60;CL:0000211!1.21e-15!60;CL:0002371!1.00e-14!591;CL:0000055!1.96e-13!180;CL:0000144!4.22e-13!625;CL:0002539!4.42e-12!10;CL:0000012!1.84e-10!682;CL:0002194!2.86e-10!63;CL:0000576!2.86e-10!63;CL:0000040!2.86e-10!63;CL:0000559!2.86e-10!63;CL:0000548!4.51e-10!679;CL:0000004!4.51e-10!679;CL:0000255!4.51e-10!679;CL:0002009!1.01e-09!65;CL:0000766!1.22e-08!76;CL:0000839!1.68e-08!70;CL:0002595!1.81e-08!5;CL:0000557!2.79e-08!71;CL:0000003!7.78e-08!722;CL:0000222!1.01e-07!119;CL:0000569!8.42e-07!4;CL:0000011!8.42e-07!4;CL:0000134!9.52e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.45e-29;32!CL:0000860;3.16e-25;33!CL:0002057;3.16e-25;33!CL:0002539;4.83e-19;10!CL:0000473;7.67e-18;39!CL:0000234;7.67e-18;39!CL:0000192;1.86e-17;43!CL:0002595;2.76e-15;5!CL:0000576;1.27e-14;48!CL:0002592;4.82e-10;3!CL:0000766;5.02e-10;69!CL:0000187;1.76e-09;55!CL:0002596;8.67e-08;2!CL:0002593;2.25e-07;2!CL:0000393;2.53e-07;61!CL:0000211;2.53e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.62e-31,32;CL:0000860,4.96e-28,42;CL:0002057,4.96e-28,42;CL:0000473,8.15e-24,48;CL:0000234,8.15e-24,48;CL:0000192,1.07e-21,43;CL:0000514,1.07e-21,43;CL:0002539,4.42e-19,10;CL:0000680,2.21e-18,58;CL:0000056,2.21e-18,58;CL:0000355,2.21e-18,58;CL:0002194,6.20e-18,59;CL:0000576,6.20e-18,59;CL:0000040,6.20e-18,59;CL:0000559,6.20e-18,59;CL:0000187,9.15e-18,55;CL:0002009,3.54e-17,61;CL:0002595,1.33e-15,5;CL:0000393,1.65e-15,61;CL:0000211,1.65e-15,61;CL:0000839,1.73e-15,66;CL:0000048,3.43e-15,427;CL:0000557,3.51e-15,67;CL:0000034,4.45e-15,441;CL:0000723,8.61e-15,433;CL:0000766,8.98e-14,72;CL:0002592,4.91e-10,3;CL:0002596,8.41e-08,2;CL:0000763,1.51e-07,108;CL:0000049,1.51e-07,108;CL:0002593,2.44e-07,2;CL:0002087,8.31e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-19;42!CL:0000514;1.86e-17;43!CL:0000355;3.34e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!7.14e-14!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.92e-20;14!DOID:120;2.78e-09;27!DOID:193;1.65e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.35e-20,14;DOID:120,2.69e-09,27;DOID:193,1.60e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.46e-22!167;UBERON:0001637!1.37e-21!42;UBERON:0003509!1.37e-21!42;UBERON:0004572!1.37e-21!42;UBERON:0004573!3.09e-20!33;UBERON:0004571!3.09e-20!33;UBERON:0004290!3.36e-20!70;UBERON:0001134!4.59e-19!61;UBERON:0002036!4.59e-19!61;UBERON:0003082!4.59e-19!61;UBERON:0002385!4.11e-18!63;UBERON:0001015!4.11e-18!63;UBERON:0000383!4.11e-18!63;UBERON:0000914!4.29e-18!83;UBERON:0002329!4.29e-18!83;UBERON:0003077!4.29e-18!83;UBERON:0003059!4.29e-18!83;UBERON:0007282!4.29e-18!83;UBERON:0009618!4.29e-18!83;UBERON:0007285!4.29e-18!83;UBERON:0000486!1.44e-17!82;UBERON:0003081!1.10e-12!216;UBERON:0001981!2.05e-12!60;UBERON:0007500!2.05e-12!60;UBERON:0004537!2.05e-12!60;UBERON:0006965!2.05e-12!60;UBERON:0004237!4.42e-12!10;UBERON:0004695!4.42e-12!10;UBERON:0002111!4.42e-12!10;UBERON:0004178!4.42e-12!10;UBERON:0000055!1.60e-10!69;UBERON:0004872!1.74e-10!84;UBERON:0000926!9.78e-10!448;UBERON:0004120!9.78e-10!448;UBERON:0006603!9.78e-10!448;UBERON:0002049!6.84e-09!79;UBERON:0007798!6.84e-09!79;UBERON:0002371!6.97e-09!80;UBERON:0003834!1.81e-08!5;UBERON:0001533!1.81e-08!5;UBERON:0002118!6.24e-08!5;UBERON:0004532!6.24e-08!5;UBERON:0001474!1.04e-07!86;UBERON:0001009!1.04e-07!113;UBERON:0005256!1.05e-07!143;UBERON:0004535!1.31e-07!110;UBERON:0004765!1.38e-07!101;UBERON:0001434!1.38e-07!101;UBERON:0001135!2.80e-07!15;UBERON:0000490!3.54e-07!138;UBERON:0000947!5.75e-07!21;UBERON:0010191!5.75e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.49e-30;33!UBERON:0004571;4.49e-30;33!UBERON:0004237;4.83e-19;10!UBERON:0004695;4.83e-19;10!UBERON:0002111;4.83e-19;10!UBERON:0004178;4.83e-19;10!UBERON:0001637;4.56e-18;42!UBERON:0003509;4.56e-18;42!UBERON:0004572;4.56e-18;42!UBERON:0003834;2.76e-15;5!UBERON:0001533;2.76e-15;5!UBERON:0001135;3.22e-12;15!UBERON:0003513;7.90e-11;7!UBERON:0000947;1.06e-10;21!UBERON:0010191;1.06e-10;21!UBERON:0000992;1.25e-10;13!UBERON:0003498;4.82e-10;3!UBERON:0005985;4.82e-10;3!UBERON:0001621;4.82e-10;3!UBERON:0002118;5.81e-10;5!UBERON:0007500;3.97e-08;56!UBERON:0001981;3.97e-08;56!UBERON:0004537;3.97e-08;56!UBERON:0005396;8.67e-08;2!UBERON:0002385;1.01e-07;31!UBERON:0001015;1.01e-07;31!UBERON:0000383;1.01e-07;31!UBERON:0002119;1.59e-07;4!UBERON:0002456;2.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.69e-33,33;UBERON:0004571,1.69e-33,33;UBERON:0002204,1.33e-25,167;UBERON:0001637,3.73e-25,42;UBERON:0003509,3.73e-25,42;UBERON:0004572,3.73e-25,42;UBERON:0003081,1.13e-20,203;UBERON:0000926,5.66e-20,315;UBERON:0004120,5.66e-20,315;UBERON:0006603,5.66e-20,315;UBERON:0004237,4.42e-19,10;UBERON:0004695,4.42e-19,10;UBERON:0002111,4.42e-19,10;UBERON:0004178,4.42e-19,10;UBERON:0001134,7.63e-17,62;UBERON:0002036,7.63e-17,62;UBERON:0003082,7.63e-17,62;UBERON:0007500,2.21e-16,59;UBERON:0001981,2.21e-16,59;UBERON:0004537,2.21e-16,59;UBERON:0006965,2.21e-16,59;UBERON:0002385,3.79e-16,64;UBERON:0001015,3.79e-16,64;UBERON:0000383,3.79e-16,64;UBERON:0002371,8.03e-16,76;UBERON:0002329,1.20e-15,71;UBERON:0003059,1.20e-15,71;UBERON:0007282,1.20e-15,71;UBERON:0004290,1.20e-15,71;UBERON:0009618,1.20e-15,71;UBERON:0003834,1.33e-15,5;UBERON:0001533,1.33e-15,5;UBERON:0003077,2.36e-15,72;UBERON:0007285,2.36e-15,72;UBERON:0007524,4.58e-15,73;UBERON:0001474,3.00e-14,82;UBERON:0007503,9.67e-14,78;UBERON:0000055,1.55e-13,68;UBERON:0004872,6.32e-13,83;UBERON:0000486,1.40e-12,83;UBERON:0004765,1.75e-12,90;UBERON:0001135,3.04e-12,15;UBERON:0002405,6.69e-12,93;UBERON:0002049,3.67e-11,78;UBERON:0007798,3.67e-11,78;UBERON:0003513,4.74e-11,7;UBERON:0002390,5.18e-11,98;UBERON:0003061,5.18e-11,98;UBERON:0000992,8.66e-11,13;UBERON:0000947,1.02e-10,21;UBERON:0010191,1.02e-10,21;UBERON:0001434,1.11e-10,100;UBERON:0002118,3.78e-10,5;UBERON:0001621,4.91e-10,3;UBERON:0002193,1.73e-09,108;UBERON:0004535,1.47e-08,109;UBERON:0001009,3.43e-08,112;UBERON:0005396,8.41e-08,2;UBERON:0003914,1.27e-07,117;UBERON:0002119,1.39e-07,4;UBERON:0002456,2.44e-07,2;UBERON:0005256,6.71e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,1.89515962028049,0,0,0,0.218441372130172,0,0,0,2.01697543935533,2.41077811209591,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,3.32397245119126,1.40381113229099,2.17010870715852,0,0,0,0,0,0,0.464858073811369,1.6446715520873,5.57471467611186,2.58923153089935,2.56160706529101,6.14853797710322,3.44745680736619,5.16387746867061,5.41705946377367,0.188242339542605,0.272906150057846,1.12361742222542,7.03992952453076,7.06043859567406,5.75403413219137,0,0,0,1.16083695451434,3.97169657283798,1.24564449799115,1.00499466102697,0.521482918420201,3.69221035998698,0,0.368277635987565,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,8.07696002960635,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.936480230490962,2.2818872861778,0.597794722207204,0,0,0.280901613404497,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.89694817844431,0,0.211931901159562,0,0,0,0,0.675105328965065,0,0,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,1.15825045334063,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0.640365346820666,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,1.9531789784444,1.31403449622095,0.519254429183621,1.04589340613963,0,0,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.307007349452259,1.65403886981437,0,0.145016693914229,0.596586391912706,0,0,0,0.255225424989168,0,0,4.7221852024596,4.1822236209636,2.15623506123262,2.12922412126809,1.73986598415015,2.22389062924704,0.858749320451947,0,0.316379424718726,0,0,0,4.45484547096312,4.70969184119538,0,0,0,1.61745985258653,3.17020642346017,2.10629228119491,0,1.21856744815642,6.33900880540533,0,0,0,1.65409603063837,2.65375590096488,1.75380354101505,0,0,0.608731130888112,0.92947049429925,0,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.979762080328227,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,5.49268715297758,0,0.889811221596536,4.11912123114462,0.453692771289717,0.932623203496683,9.1670192993573,2.23015474029183,2.24901556081802,1.55262956876259,0,0.53168342911599,2.08698024724694,1.20206087197775,1.14241563650639,2.03435366602331,2.90957854724095,0.322231671127465,1.85613503951397,1.59238355479446,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21023041222112,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:127757881..127757905,+ | |||
}} |
Revision as of 16:41, 11 January 2014
Short description: | p@chr12:127757881..127757905, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127757881..127757905, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.35e-20 | 14 |
female reproductive organ cancer | 2.69e-09 | 27 |
reproductive organ cancer | 1.60e-08 | 29 |