FFCP PHASE1:Hg19::chr14:24025384..24025403,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18987 | |||
|TSSclassifier=strong | |||
|UniProt=G3V5B9 | |||
|association_with_transcript=39bp_to_ENST00000557630_5end | |||
|description=CAGE_peak_4_at_THTPA_5end | |||
|id=chr14:24025384..24025403,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.50e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.25e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.86e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-20!115;UBERON:0001049!1.18e-15!57;UBERON:0005068!1.18e-15!57;UBERON:0006241!1.18e-15!57;UBERON:0007135!1.18e-15!57;UBERON:0001017!4.13e-15!82;UBERON:0005743!3.74e-14!86;UBERON:0000073!1.99e-13!94;UBERON:0001016!1.99e-13!94;UBERON:0002616!1.07e-12!59;UBERON:0000955!3.69e-11!69;UBERON:0006238!3.69e-11!69;UBERON:0003075!5.79e-11!86;UBERON:0007284!5.79e-11!86;UBERON:0003080!9.91e-11!42;UBERON:0002346!1.15e-10!90;UBERON:0002020!1.64e-10!34;UBERON:0003528!1.64e-10!34;UBERON:0002780!1.76e-10!41;UBERON:0001890!1.76e-10!41;UBERON:0006240!1.76e-10!41;UBERON:0001893!2.31e-10!34;UBERON:0002791!6.46e-10!33;UBERON:0001869!2.52e-09!32;UBERON:0003056!5.31e-08!61;UBERON:0000956!1.55e-07!25;UBERON:0000203!1.55e-07!25;UBERON:0004121!2.04e-07!169;UBERON:0000924!2.36e-07!173;UBERON:0006601!2.36e-07!173;UBERON:0002619!9.20e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.20e-20;34!UBERON:0003528;1.21e-20;34!UBERON:0002020;1.21e-20;34!UBERON:0002791;7.59e-20;32!UBERON:0001869;1.99e-19;32!UBERON:0002780;1.31e-18;41!UBERON:0001890;1.31e-18;41!UBERON:0000956;2.28e-17;25!UBERON:0000203;2.28e-17;25!UBERON:0000073;3.69e-16;53!UBERON:0002616;3.69e-16;53!UBERON:0002619;9.25e-16;22!UBERON:0001950;4.78e-13;20!UBERON:0001017;1.47e-10;75!UBERON:0000955;9.71e-10;68!UBERON:0000125;3.62e-09;9!UBERON:0002308;3.62e-09;9!UBERON:0001016;2.34e-08;83!UBERON:0007023;5.50e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-29,81;UBERON:0001049,8.97e-29,56;UBERON:0005068,8.97e-29,56;UBERON:0006241,8.97e-29,56;UBERON:0007135,8.97e-29,56;UBERON:0000073,4.57e-27,53;UBERON:0002616,4.57e-27,53;UBERON:0001016,7.05e-27,89;UBERON:0007023,1.86e-25,114;UBERON:0002780,3.36e-25,41;UBERON:0001890,3.36e-25,41;UBERON:0003080,3.36e-25,41;UBERON:0006240,3.36e-25,41;UBERON:0003528,7.51e-25,34;UBERON:0002020,7.51e-25,34;UBERON:0001893,1.87e-24,34;UBERON:0000955,4.10e-23,68;UBERON:0006238,4.10e-23,68;UBERON:0002791,6.80e-22,32;UBERON:0001869,1.19e-21,32;UBERON:0003075,4.09e-19,82;UBERON:0007284,4.09e-19,82;UBERON:0002346,9.73e-18,86;UBERON:0000956,2.50e-17,25;UBERON:0000203,2.50e-17,25;UBERON:0003056,3.03e-17,61;UBERON:0002619,5.87e-16,22;UBERON:0010371,7.42e-15,104;UBERON:0011216,4.37e-14,223;UBERON:0004121,2.33e-13,171;UBERON:0000924,2.33e-13,171;UBERON:0006601,2.33e-13,171;UBERON:0001950,2.88e-13,20;UBERON:0010314,6.35e-12,132;UBERON:0000125,4.46e-09,9;UBERON:0002308,4.46e-09,9 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.422863212287913,1.0007329835313,0.893922188854576,0,2.53299878168311,0,0.783556884599516,0.245733936501509,0,0.436882744260345,0,0.495065411840187,0,0.672325146451775,0,0.730310090387373,0,0.492484232307152,0.408001382488506,2.19418305034661,1.14494394852423,0.410623275218653,1.12988375635323,0.229240217243854,0,0,0,0.383829398097213,0.464448369948228,1.83884244895785,0.6024118375565,0.739508020333575,0,0,0.293600439334847,0,0.200544447470142,0.651032612147555,0,0.647787332037959,0,0.436194716338694,0,0.242584061187816,0.464858073811369,0,0,0,0.768482119587302,0,0.344745680736619,0,0,0,0.818718450173537,0,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0,1.21079900526674,0,0,0,0,0.419317291016752,0.336985893439485,0.600707571366025,0.32145117339416,0.855038231223746,0.19891667719909,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,1.14681968437569,0,0,0.263384084775077,0,1.57204305099666,0.411202997999018,0.167186495390678,0.32592226663359,0.946895611469467,0,0.445641827540694,0.294605907474837,0.221533894583621,0.541607727530031,0.640456598628376,0.650296737799391,0.493313713811028,0.276350017785848,0.869409257205157,0.889719378972363,0.267540828089713,2.09071047609954,0.226618685395132,0.766440987203842,1.37450978193052,1.01207876807801,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.255973222308837,1.24930726552346,0.473554504088034,0.821127996921047,0.201606743224732,0,1.01377082717959,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0.283604451492204,0.886917589850256,0.790513071238134,0.523916301990851,0,0.741568885568859,0,0.348259474598534,0.531831842075461,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,3.06633274931766,0,0,1.31780417436063,0,0.436094052142534,0,0.506522046658319,0.794455084879313,0.573673241497627,1.06400514659507,0,0,0.74000264525148,0.933633106199299,0.134710672069688,0.163461903113459,0.302714855289863,0,0.468642863667593,0.624320153660641,0,1.19558944441441,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0.910161361938026,2.15585442544872,0,0.250237039743928,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0.358779271377724,0.640672166455702,0,0.300091096084402,0.412210116953756,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0.403008392910561,0.339121184620975,0.386521706326594,0,0,2.80539524098069,2.12047629314376,1.51052125730374,0.725627385107593,2.52320850875628,1.09493207722749,0,0,0,0,0,0.473227200159376,1.34867752062481,0,1.10293972732394,1.30727666455444,2.13543557199987,1.8876383142423,1.17732879075208,0.769494313892781,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0.614942192715568,0.514703430895577,0.439001141634502,0,0.301586917234893,0.0925884451585296,0.325808305310325,2.07986957055916,0,0.927443239800615,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0.445893486866185,0.93733833986777,0.16798212819886,0,0.358234090811393,0.290633938513962,0,2.46331618947972,0.616339038092582,0.621984346622316,0.288239906833923,0.50496973370552,0.126995788584338,1.52795370223311,0,0,0.205654985406647,0.600686115687835,0,0.224262168690721,0,0.4400297149257,0,0,1.690605505112,0.797814349754612,0,0.514414748524284,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0,1.06617584622764,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,1.14861935834114,0,0.434343920002738,0.410952645100767,0.179060963239896,0.112085143993527,0.197030760201927,1.07813787429759,0.898401253958239,0.76228387266739,1.30139853857622,0.773288812777695,1.17261385734044,1.27587750330633,0,0,0,0.12269149171914,0,1.08506009479894,0.415941723061614,0.535286966391485,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0.587403472388222,0.686286847621712,0.620304078368662,0.647142602455851,0.853820462427555,0,0,0.604780586659361,0.248107807818777,0,0.561320188866147,0.384417447767103,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,1.03850885836724,0.464841513839837,0.120859449591622,0.40101294060657,0.460404944679482,0.114814448164607,0.182091168006717,0.393373244878272,0.902399225814824,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0,0.764628819135115,0,0.223874754722178,1.31555925987561,1.0457418040996,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.165018999841176,0.574265537996172,0.650060246036521,0,0.386682873168488,0.462145851343933,0,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.356128142586949,0.165284915360978,0.384380134730212,0.382838137483752,0.708104465988849,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.715624433709956,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,0.719489830333259,0.274537029736055,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,0.35667105148125,0.354761064070598,0.422215270595328,0,0,0.699869440489966,0.577332676353072,0.670302275535787,2.17781969722645,0.470719003883896,0.43050537267123,0,0,0,1.01489521846434,0,0.569647187174163,0.476463550915578,0.822724546172388,0,1.08006287447623,0,0.213648142254946,0.962479855263359,0,0,0,0.0711418433484141,0.797131363644112,0.399158742865633,0.191505370132367,0.635020748171649,0.649243880549111,0.280797178113459,0.456469358066384,0.313359791546046,0,0,0.481764225311099,0.201799707191048,0,0,0,0.223676107892416,0,0.976940477010201,0,0,0.270455678475983,0,0,0.37428108081644,0.439524537815682,0.970884173996107,0.222886768554957,0.284136146806413,0.71623345421307,0,0.614321404198464,0.994147647766298,1.26602474769461,0.445234820091624,0.329607748453519,0.211125408127993,0.19924798825107,0.276283915531148,0.503865495708552,0.920418142519393,0,0.622079175323615,0.269605053441981,0.537063524026827,0,0.690503839458535,0,0,1.93866549219044,1.66982576691332,0,0.520855522170466,1.57427999993152,0.724999575434793,0.1137934482855,0.254253650292766,0.945550727071745,0.344743373241465,0.291604613383254,0.347249989866585,0.885741385813839,2.17073589525734,1.52581736317083,0.552896299656123,0.591095237907095,1.97446857438575,0.21787692703798,0.139423744278603,0.461701551022782,0.113942055847001,0.23056390438806,0.0897576444097721,0.760531603454056,0,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0.317873157960757,0.210998064528027,0,0.282706142867882,0,0.995261931078505,0.796118080530053,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,1.48282492557489,1.60515529459758,1.63985112007737,0.182454789215666,0.586993856796269,0.242780379534093,0.789168805698781,0,4.28501866282686,0.126373159256976,1.20258735531594,0.829505531177977,0,0,0.313932918407225,0,0.569219092059585,0.416024019039416,0.520679215005393,0.293977192243133,0.174118413160805,1.39781334593624,0,0.677294319023596,0.365446585430928,0.410577285266046,0.484945082442097,0.353024506766001,0.677942222341597,0.137041924646751,0.397429223405979,1.39283751102933,0.195551382734803,0.0801588202515337,1.28071796843612,0.39961921916426,1.00863292007874,0.114536596165916,1.02956998717179,0.14405479798815,0.248505071130865,0.471388069233591,0,0.104602846312333,0.101998217636322,0,0,1.23214841002794,0,0.859530882839914,0.525774708558629,0.558564802544508,0.458320848023367,0,1.59743200399193,1.71690419254628,0.446342914883745,0.53746777989381,0,0,0.0787831823072236,0.494495150286999,0.337017719270924,0.393709926058995,0.254019996197353,2.38568906942791,1.22583065500418,1.76828463311521,1.78801267576404,0.415440338029185,0,0,1.15424157650247,0.335434687599266,1.81253126788156,0.577000469484979,0.211200673038813,2.86859742932552,0.575745591958336,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0.653174720218818,0,0.246277562248017,0.170388021785422,0.113312091520126,0.146552233678082,0,1.68067843270016,2.11572162788304,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0.496166021811951,0.197611631897944,0.243585196761792,0.638341257770182,2.1760712134779,1.2534494701135,1.83807346058077,0.655745261419609,0.157054096250234,0,1.70836770862748,0.751145584238999,2.29363678276028,0.554645257684261,0.993542447062135,1.10678907948985,0.37494122388632,0,1.14186133417987,0.235265819698172,0,0.724605143054126,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0.889811221596536,0.457680136793847,0.453692771289717,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0,0.761610424337591,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0,1.38258436151731,0,0,0,0.655219697692825,0.737318726261158,0.211312123358627,0,0.320075189082423,0.172214979660816,0,0.184105950251841,0.699397538597222,0.622077260032973,0.895260599125562,0,0.629063767423586,0.109209638192014,0.509197589862076,0.637724760305049,0.247871528518004,0,0.636008701306837,0,0,0,0,1.02766760154335,0,1.27707087245721,1.64093091392604,1.00828678488687,1.59061680667701,2.09918339321406,1.42769420259154,0.196295437002051,0.11796972334774,0.366857197043358,0.346576998451015,0,0,0.397832444232549,0.526472298444801,0.20170506870352,0,0,0.163771917510097,0.147856086217045,1.2156765231311,0,1.44680757550829,1.20490039368423,0.546974809018219,0.548257766857182,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0,0.455324382702595,0.532214220975833,0.115233987555779,0.171488009437418,0.747667062745149,1.31545547125698,0,0.333694205676207,0.627944742804112,1.09980912941201,0,0.913158720509496,0.431855182437243,0,0.857718530119876,0,0.23248285073625,0.173858272302579,0,0.207216164163037,0.51215543128185,0,1.29068207646083,0.473328002922261,0,0,0.22910686854405,0.31020638566432,0,0.559277158988962,0.294450700845729,0.121917924982269,5.17943069750316,4.10651227424988,0,0,0.233939463462106,0.198950775161368,0.951360726220549,0.33883824611688,0,0.754814217833368,0.694567422971502,1.09279780251979,0.470317296361523,0.980593287015622,0.471353094203252,1.37415926980462,0.594092800654172,1.2679671827502,0,0.281951753939561,0.128915775947154,0,0.178553938605658,1.05868461514708,0.0802413666891683,0,1.37618785021362,1.72007499781742,0.157771562193185,1.35982980381829,0.872701380680755,0,0,0.462175628631418,0.865253124247578,0.378499274505237,0.218531143927391,0.126698501011437,0.61193297845189,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,1.65833887891756,1.55149493792843,1.27940389140589,0.476128862927481,0.193766729508018,0,0.112131862580613,0.381882949668989,1.21270313374932,1.30630048738177,1.71116650542641,0.5388164241167,0.78894425931944,0,0.407016343054873,0.106727345877715,0,0.359300808426348,2.34640942403454,0.733448665097199,0.406896178315738,0,1.00636896795513,0 | |||
|short_description=p4@THTPA | |||
}} |
Revision as of 19:22, 11 January 2014
Short description: | p4@THTPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_THTPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000557630_5end |
EntrezGene: | THTPA |
HGNC: | 18987 |
UniProt: | G3V5B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.25e-07 | 5 |