FFCP PHASE1:Hg19::chr20:47444529..47444542,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32594 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TCU6 | |||
|association_with_transcript=-109bp_to_ENST00000371941,ENST00000396220,NM_020820,uc002xtw.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_PREX1_5end | |||
|id=chr20:47444529..47444542,- | |||
|ontology_enrichment_celltype=CL:0000738!1.57e-42!140;CL:0002087!1.30e-36!119;CL:0000037!1.14e-35!172;CL:0000566!1.14e-35!172;CL:0000988!2.59e-35!182;CL:0002032!1.24e-33!165;CL:0000837!1.24e-33!165;CL:0002031!2.03e-33!124;CL:0000766!2.69e-28!76;CL:0000557!5.62e-24!71;CL:0002009!7.18e-24!65;CL:0002194!8.02e-24!63;CL:0000576!8.02e-24!63;CL:0000040!8.02e-24!63;CL:0000559!8.02e-24!63;CL:0000839!1.28e-21!70;CL:0002057!2.36e-21!42;CL:0000763!4.36e-21!112;CL:0000049!4.36e-21!112;CL:0000860!9.61e-20!45;CL:0000542!1.53e-11!53;CL:0000051!1.53e-11!53;CL:0000838!1.58e-11!52;CL:0000115!1.40e-07!35;CL:0000791!1.98e-07!18;CL:0000789!1.98e-07!18;CL:0002420!1.98e-07!18;CL:0002419!1.98e-07!18;CL:0000790!1.98e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-16;33!CL:0002057;1.06e-16;33!CL:0000576;2.06e-16;48!CL:0000473;2.73e-16;39!CL:0000234;2.73e-16;39!CL:0000766;7.67e-14;69!CL:0002087;1.73e-12;104!CL:0000738;2.33e-10;136!CL:0000791;6.71e-08;18!CL:0000789;6.71e-08;18!CL:0002419;6.71e-08;18!CL:0000763;9.02e-08;100!CL:0000542;9.95e-08;53!CL:0000115;1.55e-07;36!CL:0000988;2.35e-07;177!CL:0000094;4.87e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.51e-49,136;CL:0002087,1.04e-42,115;CL:0000037,4.59e-41,168;CL:0000988,4.22e-40,177;CL:0002031,7.83e-39,120;CL:0002032,1.21e-38,161;CL:0000837,1.21e-38,161;CL:0000766,4.79e-33,72;CL:0002194,1.66e-28,59;CL:0000576,1.66e-28,59;CL:0000040,1.66e-28,59;CL:0000559,1.66e-28,59;CL:0002009,1.74e-28,61;CL:0000557,3.36e-28,67;CL:0000839,1.54e-25,66;CL:0000473,1.81e-25,48;CL:0000234,1.81e-25,48;CL:0000763,2.77e-24,108;CL:0000049,2.77e-24,108;CL:0000860,7.85e-23,42;CL:0002057,7.85e-23,42;CL:0000542,5.42e-13,53;CL:0000051,5.42e-13,53;CL:0000838,5.53e-13,52;CL:0000115,1.70e-08,36;CL:0000791,7.19e-08,18;CL:0000789,7.19e-08,18;CL:0002420,7.19e-08,18;CL:0002419,7.19e-08,18;CL:0000790,7.19e-08,18;CL:0000094,4.79e-07,8;CL:0000945,6.83e-07,24;CL:0000826,6.83e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;8.84e-17;42!CL:0000790;6.71e-08;18!CL:0000051;9.95e-08;53!CL:0000049;2.73e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.10e-31!112;UBERON:0002390!4.26e-30!102;UBERON:0003061!4.26e-30!102;UBERON:0002371!1.90e-20!80;UBERON:0001474!2.89e-20!86;UBERON:0002405!1.56e-16!115;UBERON:0004765!1.59e-16!101;UBERON:0001434!1.59e-16!101;UBERON:0003081!1.60e-15!216;UBERON:0007023!6.32e-12!115;UBERON:0001049!1.86e-11!57;UBERON:0005068!1.86e-11!57;UBERON:0006241!1.86e-11!57;UBERON:0007135!1.86e-11!57;UBERON:0001017!7.94e-11!82;UBERON:0005743!3.33e-10!86;UBERON:0000073!4.53e-10!94;UBERON:0001016!4.53e-10!94;UBERON:0002204!1.31e-09!167;UBERON:0002616!2.26e-09!59;UBERON:0000955!3.06e-09!69;UBERON:0006238!3.06e-09!69;UBERON:0002346!6.30e-09!90;UBERON:0000178!3.22e-08!15;UBERON:0000179!3.22e-08!15;UBERON:0000463!3.22e-08!15;UBERON:0003080!4.49e-08!42;UBERON:0003075!7.54e-08!86;UBERON:0007284!7.54e-08!86;UBERON:0002780!8.87e-08!41;UBERON:0001890!8.87e-08!41;UBERON:0006240!8.87e-08!41;UBERON:0001893!1.09e-07!34;UBERON:0002020!1.14e-07!34;UBERON:0003528!1.14e-07!34;UBERON:0002791!1.92e-07!33;UBERON:0001869!9.45e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.68e-09;15!UBERON:0000179;9.68e-09;15!UBERON:0000463;9.68e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.04e-35,98;UBERON:0003061,2.04e-35,98;UBERON:0002193,2.86e-35,108;UBERON:0002405,1.54e-27,93;UBERON:0002371,9.63e-25,76;UBERON:0001474,1.36e-24,82;UBERON:0004765,6.41e-22,90;UBERON:0003081,2.21e-20,203;UBERON:0001434,1.30e-19,100;UBERON:0001049,1.93e-11,56;UBERON:0005068,1.93e-11,56;UBERON:0006241,1.93e-11,56;UBERON:0007135,1.93e-11,56;UBERON:0007023,1.06e-10,114;UBERON:0002346,1.93e-10,86;UBERON:0000073,3.19e-10,53;UBERON:0002616,3.19e-10,53;UBERON:0002204,7.01e-10,167;UBERON:0001016,2.79e-09,89;UBERON:0003075,3.21e-09,82;UBERON:0007284,3.21e-09,82;UBERON:0001017,3.55e-09,81;UBERON:0000178,1.02e-08,15;UBERON:0000179,1.02e-08,15;UBERON:0000463,1.02e-08,15;UBERON:0000955,4.56e-08,68;UBERON:0006238,4.56e-08,68;UBERON:0001893,6.71e-08,34;UBERON:0003528,7.00e-08,34;UBERON:0002020,7.00e-08,34;UBERON:0002780,1.06e-07,41;UBERON:0001890,1.06e-07,41;UBERON:0003080,1.06e-07,41;UBERON:0006240,1.06e-07,41;UBERON:0002791,4.05e-07,32;UBERON:0001869,6.60e-07,32 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,0,2.97039247104112,3.97676850873499,0,0.602694528023977,0.730310090387373,2.43966399395253,9.48032147191267,7.54802557603736,4.07491137921514,2.86235987131057,5.61185142798825,3.01302335027527,6.18948586558405,4.92603536699674,4.88006844144811,14.9478425202584,12.2825407391108,21.9838895108828,0,0,0.369754010166788,2.71135202031056,2.84338464974843,5.28480790802725,42.1036510484227,27.8756781983497,34.2877175731046,27.7655188057506,14.8991086368731,21.8939232489059,19.1925675189025,12.0920301980419,18.1938045890862,16.0376035464922,10.2791972005456,9.60089749774821,14.3846196161075,14.0888388591005,9.22280696565482,13.4450815487281,10.973239620925,8.12558919566051,17.130052898377,6.00393530127261,9.21366286224847,17.7528657575123,11.2325159476633,15.983428144976,12.8642007072819,14.1619196911359,15.344091019177,14.8006711700578,10.7803192691317,11.2108004819203,9.79869794501299,11.4726242052444,9.1219314776149,10.8971910474006,13.2579948955523,11.076183560431,13.5203383239643,8.92938059853183,8.80566311135179,26.3972283194264,10.8127362845885,11.0900654820985,26.7911979116774,8.95125047395906,7.67189445811463,10.5597746676794,12.0150494477669,12.4531295540898,12.8019066769952,10.4102956629363,10.9202963591352,6.61044872784862,10.494591299889,7.96898156753228,8.80855784056408,12.2327433000073,7.93027971474155,13.4522055115569,2.63384084775077,10.0321982758055,8.64623678048162,11.9248869419715,11.3686816865661,18.2516469314811,10.4158517261641,3.89653456815823,10.4725829472063,8.83817722424511,5.31681347000691,4.06205795647523,3.97083091149593,3.25148368899696,6.57751618414705,2.21080014228679,9.27369874352168,5.19002971067211,0.535081656179426,0,17.3363294327276,27.9750960329403,15.4632350467183,3.03623630423403,6.05274287215784,6.51083453856419,4.75226022224187,6.625305239422,6.65530378002976,3.74792179657038,7.57687206540854,4.10563998460523,12.0964045934839,8.29064606928873,14.3376159843971,0,2.01210257911091,1.15076305659177,0.722878304769133,1.00267582127178,0.434539556882471,0.795285947051099,2.91980922181582,2.6469748805939,1.77383517970051,2.3715392137144,3.47094550068939,0,0,9.41187441598582,9.75126528875897,7.71156171009418,32.4347249055265,17.731842234184,11.1437250398869,9.73935796096855,1.72046919021225,3.12426451446835,6.78369530308812,9.22898759661793,5.77747888074142,7.31482382878837,6.97725249757188,7.1153252537342,1.67360306382335,8.05658634218294,3.04108842287405,5.6134273236079,6.25027236587977,2.43042584364528,6.07238152331742,7.63399866928977,8.78369547769913,3.06633274931766,9.49265659568129,8.79368370865955,104.10652977449,116.334079244498,0,0,0.886413581652058,1.05927344650575,0.286836620748814,1.77334191099179,0.560677600142307,0,0.74000264525148,1.24484414159907,2.55950276932407,2.28846664358842,1.96764655938411,2.30470369792,1.17160715916898,1.5608003841516,3.4228309292667,2.09228152772521,2.70099346880659,3.72307772046703,2.80901613404497,2.04154171254893,3.19369225010597,3.82305390350332,0,0.494533858557114,0.910161361938026,0.718618141816238,3.70339450698946,3.62843707628696,1.93944880838928,0.877955241761676,0.30648779579902,1.50238058906597,1.24775401476023,0.717558542755448,0.640672166455702,0,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0,0.484938170456436,0,0.10075209822764,0.169560592310488,0,0.545492241181669,1.14721838155602,1.34171076742555,1.98794652482228,1.85910308591229,3.21349270547648,0.756962552626885,1.09493207722749,4.69348596989448,0,4.14404764057442,0.928735856063958,0,0.473227200159376,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0.71181185733329,0,0.196221465125346,0.38474715694639,11.8104872739944,4.20725321410337,0.8231480226628,0,0,0,1.18157981336281,0,0,1.02940686179115,0,0,0,0,0.651616610620649,4.15973914111831,2.88662684050547,8.92664118308092,0.352226082707465,6.35212370148725,2.31492756288305,3.04406643575357,7.11183958163348,2.57545848628462,13.2957183287195,4.44608103764552,9.80965671105606,0,0,0,0,0.290633938513962,0.383382679165211,0.492663237895943,0.088048434013226,9.95174954595706,6.3412779503463,7.19581870530366,0,0,0,0,0.102827492703324,0,0.857479297891735,3.02753927732474,1.30788020649984,2.4935017179123,0.258543431515556,0,1.690605505112,0.531876233169741,1.04007436911366,2.05765899409714,0,3.72991050622539,0.857867961948885,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0.602878754119172,0,0,9.72990245129524,13.0586843772353,14.7583757638122,0.718874566474748,0,1.42636905040718,0.434343920002738,1.02738161275192,1.07436577943937,18.0457081829579,12.2159071325195,14.8783026653067,13.3476757730938,12.7047312111232,3.90419561572865,3.86644406388848,4.69045542936177,5.74144876487847,100.366941208922,74.7903648010062,111.063357600858,3.31267027641678,2.50085260529839,0.542530047399471,0,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,0,1.03473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| |||
|short_description=p2@PREX1 | |||
}} |
Revision as of 11:51, 21 January 2014
Short description: | p2@PREX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PREX1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -109bp_to_ENST00000371941, ENST00000396220, NM_020820, uc002xtw.1_5end |
EntrezGene: | PREX1 |
HGNC: | 32594 |
UniProt: | Q8TCU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.04e-35 | 98 |
blood island | 2.04e-35 | 98 |
hemolymphoid system | 2.86e-35 | 108 |
immune system | 1.54e-27 | 93 |
bone marrow | 9.63e-25 | 76 |
bone element | 1.36e-24 | 82 |
skeletal element | 6.41e-22 | 90 |
lateral plate mesoderm | 2.21e-20 | 203 |
skeletal system | 1.30e-19 | 100 |
neural tube | 1.93e-11 | 56 |
neural rod | 1.93e-11 | 56 |
future spinal cord | 1.93e-11 | 56 |
neural keel | 1.93e-11 | 56 |
adult organism | 1.06e-10 | 114 |
neurectoderm | 1.93e-10 | 86 |
regional part of nervous system | 3.19e-10 | 53 |
regional part of brain | 3.19e-10 | 53 |
musculoskeletal system | 7.01e-10 | 167 |
nervous system | 2.79e-09 | 89 |
neural plate | 3.21e-09 | 82 |
presumptive neural plate | 3.21e-09 | 82 |
central nervous system | 3.55e-09 | 81 |
blood | 1.02e-08 | 15 |
haemolymphatic fluid | 1.02e-08 | 15 |
organism substance | 1.02e-08 | 15 |
brain | 4.56e-08 | 68 |
future brain | 4.56e-08 | 68 |
telencephalon | 6.71e-08 | 34 |
brain grey matter | 7.00e-08 | 34 |
gray matter | 7.00e-08 | 34 |
regional part of forebrain | 1.06e-07 | 41 |
forebrain | 1.06e-07 | 41 |
anterior neural tube | 1.06e-07 | 41 |
future forebrain | 1.06e-07 | 41 |
regional part of telencephalon | 4.05e-07 | 32 |
cerebral hemisphere | 6.60e-07 | 32 |