FFCP PHASE1:Mm9::chr13:54864056..54864070,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54864056..54864070,-|id=chr13:54864056..54864070,-|ontology_enrichment_celltype=CL:0000117!1.19e-15!23;CL:0000337!1.19e-15!23;CL:0000540!1.80e-09!33;CL:0000047!1.80e-09!33;CL:0000031!1.80e-09!33;CL:0000404!1.80e-09!33;CL:0000393!2.47e-07!39;CL:0000211!2.47e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-12,23;CL:0000337,5.05e-12,23;CL:0002610,1.20e-10,3;CL:0002614,5.46e-10,3;CL:0000540,7.80e-08,33;CL:0000047,7.80e-08,33;CL:0000031,7.80e-08,33;CL:0000404,7.80e-08,33;CL:0002611,6.53e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.35e-33!52;UBERON:0005068!4.35e-33!52;UBERON:0006241!4.35e-33!52;UBERON:0007135!4.35e-33!52;UBERON:0000955!8.42e-31!50;UBERON:0006238!8.42e-31!50;UBERON:0002020!3.51e-30!34;UBERON:0002616!1.74e-29!49;UBERON:0001017!8.22e-29!73;UBERON:0005743!8.22e-29!73;UBERON:0000033!2.44e-28!63;UBERON:0000073!1.01e-27!75;UBERON:0001016!1.01e-27!75;UBERON:0002346!6.07e-27!71;UBERON:0003075!6.07e-27!71;UBERON:0007284!6.07e-27!71;UBERON:0002791!2.29e-23!29;UBERON:0003528!2.29e-23!29;UBERON:0001893!2.29e-23!29;UBERON:0003056!3.27e-22!49;UBERON:0003080!6.56e-22!40;UBERON:0004121!1.28e-21!102;UBERON:0000924!1.28e-21!102;UBERON:0006601!1.28e-21!102;UBERON:0002780!9.26e-21!39;UBERON:0001890!9.26e-21!39;UBERON:0006240!9.26e-21!39;UBERON:0007811!7.82e-19!86;UBERON:0002021!6.79e-17!10;UBERON:0000411!6.79e-17!10;UBERON:0001950!6.79e-17!10;UBERON:0002619!1.87e-16!17;UBERON:0000956!2.38e-16!21;UBERON:0001869!2.38e-16!21;UBERON:0000203!2.38e-16!21;UBERON:0000153!2.79e-16!94;UBERON:0003076!1.08e-11!12;UBERON:0003057!1.08e-11!12;UBERON:0002298!1.56e-09!6;UBERON:0002240!1.73e-09!6;UBERON:0005174!1.73e-09!6;UBERON:0001137!1.73e-09!6;UBERON:0000025!2.16e-09!114;UBERON:0001948!3.26e-08!5;UBERON:0002315!3.26e-08!5;UBERON:0002420!3.80e-08!8;UBERON:0007245!3.80e-08!8;UBERON:0010009!3.80e-08!8;UBERON:0010011!3.80e-08!8;UBERON:0000454!3.80e-08!8;UBERON:0004111!3.83e-08!122;UBERON:0002950!5.37e-07!4;UBERON:0001891!5.37e-07!4;UBERON:0009616!5.37e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.81e-38,54;UBERON:0001049,4.94e-33,52;UBERON:0005068,4.94e-33,52;UBERON:0006241,4.94e-33,52;UBERON:0007135,4.94e-33,52;UBERON:0002021,4.93e-32,10;UBERON:0000411,4.93e-32,10;UBERON:0001950,4.93e-32,10;UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0002020,3.08e-30,34;UBERON:0002346,5.81e-26,64;UBERON:0003075,5.81e-26,64;UBERON:0007284,5.81e-26,64;UBERON:0000955,2.55e-25,47;UBERON:0006238,2.55e-25,47;UBERON:0002616,2.15e-23,46;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0010371,3.53e-22,73;UBERON:0003528,4.16e-22,29;UBERON:0002791,4.16e-22,29;UBERON:0001893,4.16e-22,29;UBERON:0002619,1.51e-21,17;UBERON:0000956,4.15e-20,21;UBERON:0001869,4.15e-20,21;UBERON:0000203,4.15e-20,21;UBERON:0003080,1.30e-19,40;UBERON:0002780,6.78e-18,39;UBERON:0001890,6.78e-18,39;UBERON:0006240,6.78e-18,39;UBERON:0010314,1.30e-16,92;UBERON:0003056,2.35e-15,49;UBERON:0003076,8.93e-15,12;UBERON:0003057,8.93e-15,12;UBERON:0002240,1.63e-12,6;UBERON:0005174,1.63e-12,6;UBERON:0001137,1.63e-12,6;UBERON:0000025,1.79e-12,114;UBERON:0002950,2.34e-12,4;UBERON:0001891,2.34e-12,4;UBERON:0009616,2.34e-12,4;UBERON:0010286,2.34e-12,4;UBERON:0004111,2.46e-11,122;UBERON:0004684,1.20e-10,3;UBERON:0002275,1.20e-10,3;UBERON:0001948,4.73e-10,5;UBERON:0002315,4.73e-10,5;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0011216,1.08e-08,194;UBERON:0002256,6.53e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,2.28520787523043,2.42955395046775,0,0.191690942036473,0.919218786610021,6.60695285996332,5.36286819957788,3.84016333140609,0.131886287730194,0.457438218012048,0,5.862842979029,1.68828783009504,2.90316670775939,3.24091444021034,3.27454865837937,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.46612694769419,0,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,1.21677024134594,0.767146371990992,2.28566849015516,0.973447578406546,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.9842280745933,10.3121192419091,3.09335728218638,4.11049511862385,6.0431511791176,4.72515750162264,5.40385443869065,4.07828168085784,6.73088405277366,0,0,0,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr13:54864056..54864070,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:54864056..54864070,- | |||
|description=CAGE_peak_at_chr13:54864056..54864070,- | |||
|id=chr13:54864056..54864070,- | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-15!23;CL:0000337!1.19e-15!23;CL:0000540!1.80e-09!33;CL:0000047!1.80e-09!33;CL:0000031!1.80e-09!33;CL:0000404!1.80e-09!33;CL:0000393!2.47e-07!39;CL:0000211!2.47e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-12,23;CL:0000337,5.05e-12,23;CL:0002610,1.20e-10,3;CL:0002614,5.46e-10,3;CL:0000540,7.80e-08,33;CL:0000047,7.80e-08,33;CL:0000031,7.80e-08,33;CL:0000404,7.80e-08,33;CL:0002611,6.53e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.35e-33!52;UBERON:0005068!4.35e-33!52;UBERON:0006241!4.35e-33!52;UBERON:0007135!4.35e-33!52;UBERON:0000955!8.42e-31!50;UBERON:0006238!8.42e-31!50;UBERON:0002020!3.51e-30!34;UBERON:0002616!1.74e-29!49;UBERON:0001017!8.22e-29!73;UBERON:0005743!8.22e-29!73;UBERON:0000033!2.44e-28!63;UBERON:0000073!1.01e-27!75;UBERON:0001016!1.01e-27!75;UBERON:0002346!6.07e-27!71;UBERON:0003075!6.07e-27!71;UBERON:0007284!6.07e-27!71;UBERON:0002791!2.29e-23!29;UBERON:0003528!2.29e-23!29;UBERON:0001893!2.29e-23!29;UBERON:0003056!3.27e-22!49;UBERON:0003080!6.56e-22!40;UBERON:0004121!1.28e-21!102;UBERON:0000924!1.28e-21!102;UBERON:0006601!1.28e-21!102;UBERON:0002780!9.26e-21!39;UBERON:0001890!9.26e-21!39;UBERON:0006240!9.26e-21!39;UBERON:0007811!7.82e-19!86;UBERON:0002021!6.79e-17!10;UBERON:0000411!6.79e-17!10;UBERON:0001950!6.79e-17!10;UBERON:0002619!1.87e-16!17;UBERON:0000956!2.38e-16!21;UBERON:0001869!2.38e-16!21;UBERON:0000203!2.38e-16!21;UBERON:0000153!2.79e-16!94;UBERON:0003076!1.08e-11!12;UBERON:0003057!1.08e-11!12;UBERON:0002298!1.56e-09!6;UBERON:0002240!1.73e-09!6;UBERON:0005174!1.73e-09!6;UBERON:0001137!1.73e-09!6;UBERON:0000025!2.16e-09!114;UBERON:0001948!3.26e-08!5;UBERON:0002315!3.26e-08!5;UBERON:0002420!3.80e-08!8;UBERON:0007245!3.80e-08!8;UBERON:0010009!3.80e-08!8;UBERON:0010011!3.80e-08!8;UBERON:0000454!3.80e-08!8;UBERON:0004111!3.83e-08!122;UBERON:0002950!5.37e-07!4;UBERON:0001891!5.37e-07!4;UBERON:0009616!5.37e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.81e-38,54;UBERON:0001049,4.94e-33,52;UBERON:0005068,4.94e-33,52;UBERON:0006241,4.94e-33,52;UBERON:0007135,4.94e-33,52;UBERON:0002021,4.93e-32,10;UBERON:0000411,4.93e-32,10;UBERON:0001950,4.93e-32,10;UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0002020,3.08e-30,34;UBERON:0002346,5.81e-26,64;UBERON:0003075,5.81e-26,64;UBERON:0007284,5.81e-26,64;UBERON:0000955,2.55e-25,47;UBERON:0006238,2.55e-25,47;UBERON:0002616,2.15e-23,46;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0010371,3.53e-22,73;UBERON:0003528,4.16e-22,29;UBERON:0002791,4.16e-22,29;UBERON:0001893,4.16e-22,29;UBERON:0002619,1.51e-21,17;UBERON:0000956,4.15e-20,21;UBERON:0001869,4.15e-20,21;UBERON:0000203,4.15e-20,21;UBERON:0003080,1.30e-19,40;UBERON:0002780,6.78e-18,39;UBERON:0001890,6.78e-18,39;UBERON:0006240,6.78e-18,39;UBERON:0010314,1.30e-16,92;UBERON:0003056,2.35e-15,49;UBERON:0003076,8.93e-15,12;UBERON:0003057,8.93e-15,12;UBERON:0002240,1.63e-12,6;UBERON:0005174,1.63e-12,6;UBERON:0001137,1.63e-12,6;UBERON:0000025,1.79e-12,114;UBERON:0002950,2.34e-12,4;UBERON:0001891,2.34e-12,4;UBERON:0009616,2.34e-12,4;UBERON:0010286,2.34e-12,4;UBERON:0004111,2.46e-11,122;UBERON:0004684,1.20e-10,3;UBERON:0002275,1.20e-10,3;UBERON:0001948,4.73e-10,5;UBERON:0002315,4.73e-10,5;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0011216,1.08e-08,194;UBERON:0002256,6.53e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,2.28520787523043,2.42955395046775,0,0.191690942036473,0.919218786610021,6.60695285996332,5.36286819957788,3.84016333140609,0.131886287730194,0.457438218012048,0,5.862842979029,1.68828783009504,2.90316670775939,3.24091444021034,3.27454865837937,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.46612694769419,0,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,1.21677024134594,0.767146371990992,2.28566849015516,0.973447578406546,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.9842280745933,10.3121192419091,3.09335728218638,4.11049511862385,6.0431511791176,4.72515750162264,5.40385443869065,4.07828168085784,6.73088405277366,0,0,0,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr13:54864056..54864070,- | |||
}} |
Latest revision as of 03:31, 6 August 2015
Short description: | p@chr13:54864056..54864070, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54864056..54864070, - |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.05e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-12 | 23 |
raphe nuclei neuron | 1.20e-10 | 3 |
neuron of the substantia nigra | 5.46e-10 | 3 |
neuron | 7.80e-08 | 33 |
neuronal stem cell | 7.80e-08 | 33 |
neuroblast | 7.80e-08 | 33 |
electrically signaling cell | 7.80e-08 | 33 |
neuron of the dorsal spinal cord | 6.53e-07 | 2 |