FFCP PHASE1:Mm9::chr15:83341291..83341336,-: Difference between revisions
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{{FFCP|EntrezGene=319953|HGNC=|MCL_coexpression_id=60|UniProt=Q91V51,Q8BJG7,A6PW21|association_with_transcript=0bp_to_ENSMUST00000016897,ENSMUST00000109479,ENSMUST00000109480,ENSMUST00000131380,NM_178869,uc007xbc.2_5end|description=CAGE_peak_1_at_Ttll1_5end|id=chr15:83341291..83341336,-|ontology_enrichment_celltype=CL:0000117!2.06e-12!23;CL:0000337!2.06e-12!23;CL:0000540!2.08e-10!33;CL:0000047!2.08e-10!33;CL:0000031!2.08e-10!33;CL:0000404!2.08e-10!33;CL:0000393!1.20e-09!39;CL:0000211!1.20e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-12,23;CL:0000337,2.05e-12,23;CL:0000540,2.08e-10,33;CL:0000047,2.08e-10,33;CL:0000031,2.08e-10,33;CL:0000404,2.08e-10,33;CL:0000393,1.19e-09,39;CL:0000211,1.19e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.20e-24!71;UBERON:0003075!5.20e-24!71;UBERON:0007284!5.20e-24!71;UBERON:0000033!9.45e-24!63;UBERON:0001049!1.60e-22!52;UBERON:0005068!1.60e-22!52;UBERON:0006241!1.60e-22!52;UBERON:0007135!1.60e-22!52;UBERON:0003056!5.59e-22!49;UBERON:0001017!6.59e-22!73;UBERON:0005743!6.59e-22!73;UBERON:0000073!8.12e-22!75;UBERON:0001016!8.12e-22!75;UBERON:0000955!3.58e-21!50;UBERON:0006238!3.58e-21!50;UBERON:0002616!1.43e-20!49;UBERON:0004121!5.19e-20!102;UBERON:0000924!5.19e-20!102;UBERON:0006601!5.19e-20!102;UBERON:0003080!2.84e-19!40;UBERON:0002780!1.46e-18!39;UBERON:0001890!1.46e-18!39;UBERON:0006240!1.46e-18!39;UBERON:0002020!2.99e-17!34;UBERON:0002791!8.74e-15!29;UBERON:0003528!8.74e-15!29;UBERON:0001893!8.74e-15!29;UBERON:0000956!3.62e-10!21;UBERON:0001869!3.62e-10!21;UBERON:0000203!3.62e-10!21;UBERON:0007811!4.57e-10!86;UBERON:0000153!4.91e-10!94;UBERON:0004111!1.09e-09!122;UBERON:0000025!2.11e-09!114;UBERON:0002619!2.97e-08!17;UBERON:0002021!3.59e-07!10;UBERON:0000411!3.59e-07!10;UBERON:0001950!3.59e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.32e-25,64;UBERON:0003075,2.32e-25,64;UBERON:0007284,2.32e-25,64;UBERON:0010314,9.13e-24,92;UBERON:0000073,3.09e-23,54;UBERON:0001049,1.60e-22,52;UBERON:0005068,1.60e-22,52;UBERON:0006241,1.60e-22,52;UBERON:0007135,1.60e-22,52;UBERON:0003056,5.58e-22,49;UBERON:0001017,6.58e-22,73;UBERON:0001016,8.10e-22,75;UBERON:0010371,6.22e-21,73;UBERON:0004121,1.80e-20,95;UBERON:0000924,1.80e-20,95;UBERON:0006601,1.80e-20,95;UBERON:0000955,7.96e-20,47;UBERON:0006238,7.96e-20,47;UBERON:0003080,2.84e-19,40;UBERON:0002616,3.11e-19,46;UBERON:0002780,1.45e-18,39;UBERON:0001890,1.45e-18,39;UBERON:0006240,1.45e-18,39;UBERON:0002020,2.99e-17,34;UBERON:0003528,8.73e-15,29;UBERON:0002791,8.73e-15,29;UBERON:0001893,8.73e-15,29;UBERON:0000956,3.62e-10,21;UBERON:0001869,3.62e-10,21;UBERON:0000203,3.62e-10,21;UBERON:0004111,1.08e-09,122;UBERON:0000025,2.11e-09,114;UBERON:0002619,2.97e-08,17;UBERON:0002021,3.59e-07,10;UBERON:0000411,3.59e-07,10;UBERON:0001950,3.59e-07,10|phase1_expression=12.1713123799643,0.697950815278722,0.909998478779072,0.90739263392049,0.500895729946347,1.34303417529512,2.33612640595526,4.9066862907799,1.12630977721333,0.468129052643987,0,0.319088635981346,3.25281386869291,3.93391810885488,3.99731714178795,3.23960427823721,0.699561878128147,4.88966356305268,3.70208970735495,5.09267582157636,24.322380983206,9.63122226648587,11.2315909329742,1.91990907352088,1.60586496747019,1.72269589234506,1.29228598847722,1.72376986148711,1.14014051673824,0.756090389279792,1.33038306393183,5.08024538767705,7.99584223859941,0,0.866554859253824,1.82858109894342,1.22501613757421,6.27797446105362,7.813353445238,8.37637990358077,5.29408339227913,8.19654581950135,8.73918635456076,20.1434908760924,21.1877786248785,16.5192076945513,1.56478268869608,5.88667922227206,7.46933021297204,8.94377535741704,7.69925318939494,5.75010257459886,2.34895648480831,2.90144856804538,2.35265659399725,5.65970759279083,6.01720223871389,6.70373719960675,31.5613678940973,44.4352422588508,34.2268957893337,5.76035704517525,1.77858959222228,3.5995988691256,2.96659908770092,1.4209602298922,5.39280198933128,4.2264013585371,23.5375419940244,24.436074838036,21.8737959805437,20.2812198926701,21.6451170132581,26.2130310320002,26.357504530015,22.0612508786405,16.5173821499083,24.6436562504412,25.3450779872802,35.8730702626127,43.2736554239398,49.4867702028922,25.1264699101243,24.1987922313622,30.2540530598084,27.4004584490511,28.6167078406197,36.1614924901083,7.64834552665159,17.3814588245607,6.95674772884027,3.44169550792555,0.679971333707751,2.15881276655127,3.24888208723835,3.13618820968135,8.98844288843212,24.2011058060842,18.1850203222008,13.0735642568826,16.3378366940949,8.98285341900225,2.54805239706646,0,9.30911476348221,8.10751569520315,11.62706223534,6.8510327831436,9.83963957859253,10.0940654564081,10.5826049327343,9.43842982767638,9.68585088475446,11.6056433225519,11.6412820064348,9.29932775839599,5.19109432242185,9.39895819979426,8.84610551949874,11.6472131962135,9.05450225687614,7.75800405016355,5.59175283654366,23.4224637609238,19.2690970268379,4.85368404896324,1.7972268675888,3.59941638596045,2.6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319953 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91V51,uniprot:Q8BJG7,uniprot:A6PW21 | |||
|association_with_transcript=0bp_to_ENSMUST00000016897,ENSMUST00000109479,ENSMUST00000109480,ENSMUST00000131380,NM_178869,uc007xbc.2_5end | |||
|cluster_id=chr15:83341291..83341336,- | |||
|description=CAGE_peak_1_at_Ttll1_5end | |||
|id=chr15:83341291..83341336,- | |||
|ontology_enrichment_celltype=CL:0000117!2.06e-12!23;CL:0000337!2.06e-12!23;CL:0000540!2.08e-10!33;CL:0000047!2.08e-10!33;CL:0000031!2.08e-10!33;CL:0000404!2.08e-10!33;CL:0000393!1.20e-09!39;CL:0000211!1.20e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-12,23;CL:0000337,2.05e-12,23;CL:0000540,2.08e-10,33;CL:0000047,2.08e-10,33;CL:0000031,2.08e-10,33;CL:0000404,2.08e-10,33;CL:0000393,1.19e-09,39;CL:0000211,1.19e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.20e-24!71;UBERON:0003075!5.20e-24!71;UBERON:0007284!5.20e-24!71;UBERON:0000033!9.45e-24!63;UBERON:0001049!1.60e-22!52;UBERON:0005068!1.60e-22!52;UBERON:0006241!1.60e-22!52;UBERON:0007135!1.60e-22!52;UBERON:0003056!5.59e-22!49;UBERON:0001017!6.59e-22!73;UBERON:0005743!6.59e-22!73;UBERON:0000073!8.12e-22!75;UBERON:0001016!8.12e-22!75;UBERON:0000955!3.58e-21!50;UBERON:0006238!3.58e-21!50;UBERON:0002616!1.43e-20!49;UBERON:0004121!5.19e-20!102;UBERON:0000924!5.19e-20!102;UBERON:0006601!5.19e-20!102;UBERON:0003080!2.84e-19!40;UBERON:0002780!1.46e-18!39;UBERON:0001890!1.46e-18!39;UBERON:0006240!1.46e-18!39;UBERON:0002020!2.99e-17!34;UBERON:0002791!8.74e-15!29;UBERON:0003528!8.74e-15!29;UBERON:0001893!8.74e-15!29;UBERON:0000956!3.62e-10!21;UBERON:0001869!3.62e-10!21;UBERON:0000203!3.62e-10!21;UBERON:0007811!4.57e-10!86;UBERON:0000153!4.91e-10!94;UBERON:0004111!1.09e-09!122;UBERON:0000025!2.11e-09!114;UBERON:0002619!2.97e-08!17;UBERON:0002021!3.59e-07!10;UBERON:0000411!3.59e-07!10;UBERON:0001950!3.59e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.32e-25,64;UBERON:0003075,2.32e-25,64;UBERON:0007284,2.32e-25,64;UBERON:0010314,9.13e-24,92;UBERON:0000073,3.09e-23,54;UBERON:0001049,1.60e-22,52;UBERON:0005068,1.60e-22,52;UBERON:0006241,1.60e-22,52;UBERON:0007135,1.60e-22,52;UBERON:0003056,5.58e-22,49;UBERON:0001017,6.58e-22,73;UBERON:0001016,8.10e-22,75;UBERON:0010371,6.22e-21,73;UBERON:0004121,1.80e-20,95;UBERON:0000924,1.80e-20,95;UBERON:0006601,1.80e-20,95;UBERON:0000955,7.96e-20,47;UBERON:0006238,7.96e-20,47;UBERON:0003080,2.84e-19,40;UBERON:0002616,3.11e-19,46;UBERON:0002780,1.45e-18,39;UBERON:0001890,1.45e-18,39;UBERON:0006240,1.45e-18,39;UBERON:0002020,2.99e-17,34;UBERON:0003528,8.73e-15,29;UBERON:0002791,8.73e-15,29;UBERON:0001893,8.73e-15,29;UBERON:0000956,3.62e-10,21;UBERON:0001869,3.62e-10,21;UBERON:0000203,3.62e-10,21;UBERON:0004111,1.08e-09,122;UBERON:0000025,2.11e-09,114;UBERON:0002619,2.97e-08,17;UBERON:0002021,3.59e-07,10;UBERON:0000411,3.59e-07,10;UBERON:0001950,3.59e-07,10 | |||
|phase1_expression=12.1713123799643,0.697950815278722,0.909998478779072,0.90739263392049,0.500895729946347,1.34303417529512,2.33612640595526,4.9066862907799,1.12630977721333,0.468129052643987,0,0.319088635981346,3.25281386869291,3.93391810885488,3.99731714178795,3.23960427823721,0.699561878128147,4.88966356305268,3.70208970735495,5.09267582157636,24.322380983206,9.63122226648587,11.2315909329742,1.91990907352088,1.60586496747019,1.72269589234506,1.29228598847722,1.72376986148711,1.14014051673824,0.756090389279792,1.33038306393183,5.08024538767705,7.99584223859941,0,0.866554859253824,1.82858109894342,1.22501613757421,6.27797446105362,7.813353445238,8.37637990358077,5.29408339227913,8.19654581950135,8.73918635456076,20.1434908760924,21.1877786248785,16.5192076945513,1.56478268869608,5.88667922227206,7.46933021297204,8.94377535741704,7.69925318939494,5.75010257459886,2.34895648480831,2.90144856804538,2.35265659399725,5.65970759279083,6.01720223871389,6.70373719960675,31.5613678940973,44.4352422588508,34.2268957893337,5.76035704517525,1.77858959222228,3.5995988691256,2.96659908770092,1.4209602298922,5.39280198933128,4.2264013585371,23.5375419940244,24.436074838036,21.8737959805437,20.2812198926701,21.6451170132581,26.2130310320002,26.357504530015,22.0612508786405,16.5173821499083,24.6436562504412,25.3450779872802,35.8730702626127,43.2736554239398,49.4867702028922,25.1264699101243,24.1987922313622,30.2540530598084,27.4004584490511,28.6167078406197,36.1614924901083,7.64834552665159,17.3814588245607,6.95674772884027,3.44169550792555,0.679971333707751,2.15881276655127,3.24888208723835,3.13618820968135,8.98844288843212,24.2011058060842,18.1850203222008,13.0735642568826,16.3378366940949,8.98285341900225,2.54805239706646,0,9.30911476348221,8.10751569520315,11.62706223534,6.8510327831436,9.83963957859253,10.0940654564081,10.5826049327343,9.43842982767638,9.68585088475446,11.6056433225519,11.6412820064348,9.29932775839599,5.19109432242185,9.39895819979426,8.84610551949874,11.6472131962135,9.05450225687614,7.75800405016355,5.59175283654366,23.4224637609238,19.2690970268379,4.85368404896324,1.7972268675888,3.59941638596045,2.66847476853436,45.9857262972806,35.6850470198529,57.8010019719176,48.4969853336451,44.7502050328078,38.8563643326377,35.6930778749067,11.1004906596845,7.83763914843586,7.32895999457657,13.8891624885073,11.5807194236806,16.3230494147766,20.1669585381991,18.3859877759572,17.009124787832,18.7046031615881,23.8002380381711,24.3181168494675,12.0718076042392,11.9136830505726,13.1963343122962,9.20622076195814,9.17555922444473,9.05455632957633,11.7295817752528,12.3401245427466,1.40442637462647,2.31613116403244,2.84163499395593,11.3919174894526,12.6644072389792,13.8647787324981,14.2046841351126,14.5605531493079,12.8041703696524,15.1147064087765,17.1694976895756,14.3621371111618,12.8356682932515,13.1333971263276,12.3224590509701,10.3801991071986,13.6121071480451,10.7365135008297,27.3376933133365,56.3917275838479,2.64335026387038,3.17340679996253,12.797295032114,9.52170354627798,7.86091514064769,7.05892336181699,7.78323153457046,8.94060442729028,3.32170343081158,6.91735609840846,4.77536896720512,5.96869416123452,6.43381487493096,1.79763881730844,3.02593269824572,3.58454291857861,12.8974172648096,11.7675967988021,12.3978509240388,10.7935203758017,9.50367187121366,9.04752076585109,10.3075555512539,6.9376769550413,10.047918581848,9.62497878590044,5.33614728756868,7.50802975722423,7.66580080941492,5.17182858485164,4.46292267054706,5.788251834058,4.58326533206556,4.31544206176216,3.40483976227574,3.0201755450689,7.18841032636773,4.09355042435354,5.61667811606209,3.28352541331245,5.20252499213545,6.75420929908714,12.5632169313291,10.4220276473767,9.61493361007953,9.67546988918572,11.0304416695596,9.38035041674168,10.7119638398706,9.17128144931655,10.719189799221,7.75126413770712,9.08892181347676,9.66793556822854,11.569893785015,11.4272756279394,6.03165135757089,5.4390568381871,9.83528546038072,8.82997588175144,39.0137933670334,42.0789954866009,10.3279015587306,8.83648245215305,8.83423014365519,14.055794794679,14.2179442503647,7.64700153448166,9.80314165962534,8.49229592366497,10.9298889452221,9.9366991689846,14.6256477840214,34.7027021735552,11.071326646245,13.5329858787114,10.5876523579824,10.7230579932148,5.30980553359851,11.1679092631291,12.09294227859,9.8074641473067,13.8791889653963,15.0643222492524,6.46070732920553,7.99774204850512,13.5469003786194,8.53299246426703,13.7044191147498,8.25084345985495,16.6815406819356,14.4048875225048,20.6973894052407,19.9333442579381,17.9113635978696,15.161349496176,21.5559216988778,23.4438010818241,6.10146440965647,4.87213762986786,11.688005096913,2.14352128823924,6.94297034792394,6.99629929166608,3.70054266409723,3.61109979439135,4.08073171281791,38.939313422207,6.66396435111626,8.46186158649212,6.66700298530962,6.78126445216888,4.64760374251486,7.0921233694022,3.0596117398894,2.79902904647316,4.00779924032829,9.54670618015114,11.5462637657114,9.96265388921559,11.8805874903981,10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| |||
|short_description=p1@Ttll1 | |||
}} |
Revision as of 18:17, 5 August 2015
Short description: | p1@Ttll1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ttll1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000016897, ENSMUST00000109479, ENSMUST00000109480, ENSMUST00000131380, NM_178869, uc007xbc.2_5end |
EntrezGene: | 319953 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.05e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.05e-12 | 23 |
neuron | 2.08e-10 | 33 |
neuronal stem cell | 2.08e-10 | 33 |
neuroblast | 2.08e-10 | 33 |
electrically signaling cell | 2.08e-10 | 33 |
electrically responsive cell | 1.19e-09 | 39 |
electrically active cell | 1.19e-09 | 39 |