FFCP PHASE1:Mm9::chr1:145487892..145487908,+: Difference between revisions
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{{FFCP|EntrezGene=26878|HGNC=|MCL_coexpression_id=2|UniProt=O54905|association_with_transcript=65bp_to_NM_020025,uc007cwy.2_5end|description=CAGE_peak_2_at_B3galt2_5end|id=chr1:145487892..145487908,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.03e-19!102;UBERON:0000924!2.03e-19!102;UBERON:0006601!2.03e-19!102;UBERON:0000033!2.50e-15!63;UBERON:0002346!1.61e-13!71;UBERON:0003075!1.61e-13!71;UBERON:0007284!1.61e-13!71;UBERON:0001017!5.26e-13!73;UBERON:0005743!5.26e-13!73;UBERON:0000073!7.98e-13!75;UBERON:0001016!7.98e-13!75;UBERON:0001049!1.33e-12!52;UBERON:0005068!1.33e-12!52;UBERON:0006241!1.33e-12!52;UBERON:0007135!1.33e-12!52;UBERON:0000955!3.05e-12!50;UBERON:0006238!3.05e-12!50;UBERON:0003056!4.93e-12!49;UBERON:0002616!1.10e-11!49;UBERON:0002020!1.52e-11!34;UBERON:0003080!1.92e-10!40;UBERON:0002780!5.57e-10!39;UBERON:0001890!5.57e-10!39;UBERON:0006240!5.57e-10!39;UBERON:0002791!7.03e-10!29;UBERON:0003528!7.03e-10!29;UBERON:0001893!7.03e-10!29;UBERON:0000956!7.93e-09!21;UBERON:0001869!7.93e-09!21;UBERON:0000203!7.93e-09!21;UBERON:0002021!1.08e-08!10;UBERON:0000411!1.08e-08!10;UBERON:0001950!1.08e-08!10;UBERON:0007811!2.44e-08!86;UBERON:0000153!9.67e-08!94;UBERON:0002619!1.13e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.74e-19,73;UBERON:0004121,4.77e-19,95;UBERON:0000924,4.77e-19,95;UBERON:0006601,4.77e-19,95;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0000073,7.59e-13,54;UBERON:0001049,6.72e-12,52;UBERON:0005068,6.72e-12,52;UBERON:0006241,6.72e-12,52;UBERON:0007135,6.72e-12,52;UBERON:0002020,6.98e-12,34;UBERON:0001017,1.05e-11,73;UBERON:0001016,5.44e-11,75;UBERON:0003056,5.50e-11,49;UBERON:0002021,9.21e-11,10;UBERON:0000411,9.21e-11,10;UBERON:0001950,9.21e-11,10;UBERON:0000956,1.08e-10,21;UBERON:0001869,1.08e-10,21;UBERON:0000203,1.08e-10,21;UBERON:0000955,5.33e-10,47;UBERON:0006238,5.33e-10,47;UBERON:0003528,8.38e-10,29;UBERON:0002791,8.38e-10,29;UBERON:0001893,8.38e-10,29;UBERON:0010314,1.36e-09,92;UBERON:0002616,2.19e-09,46;UBERON:0002619,3.33e-09,17;UBERON:0003080,8.83e-09,40;UBERON:0002780,2.90e-08,39;UBERON:0001890,2.90e-08,39;UBERON:0006240,2.90e-08,39|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.8664130215526,1.35005938331691,2.3135745748652,1.99955689082663,2.20868540951614,1.46988959057945,0.862609239164127,1.83843757322004,3.30347642998166,3.06449611404451,3.68655679814984,0.395658863190582,0.274462930807229,0.52091337055676,0.837548997004143,4.50210088025344,2.13917546887534,4.71405736757868,4.27115042397309,1.86399445825301,0.075726193333184,0.453429360640713,0,0.860423876981386,0,0,0,0,2.80888840263504,0,0,0,5.21120653173718,0,0,0,0,0,0,2.05530983494308,3.6251303710604,8.46120192669501,0,0.304465478312141,0.230615497256059,0,0.470354828542819,6.03199638382442,0,41.5000154360146,0,2.91180329905337,2.87093973998512,2.90925151881133,1.86391761218122,1.46390398505774,2.30391377494801,0,0.11981512450592,0,0,4.19413790333504,3.66000482254901,2.89005009859588,11.9938780932671,16.6215047264715,4.1557608911912,8.27430441645564,0,11.8186622079588,2.52722758433675,7.36546495602659,0,1.14951052216736,1.62055916824814,2.10986744970001,1.49680298132921,2.17793324484245,1.3118241438362,10.3481348295606,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.648550476366846,1.31579988682799,1.97595103761946,1.34206418760372,15.9820360908737,7.82075054082562,0.330418782983798,0.793351699990633,0,0,0.128867461322093,0,0,0.190225626112559,0.949058123089023,0,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.995706366271836,0,0.228497025219458,0,0,0,0,0.126473074248515,0,0.784993639206874,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.655453258862952,0.690739927463582,1.15719246865209,0,0,8.35999264132362,17.1080782708934,3.37156238974363,3.39913891117389,0,11.1087207969924,0.315508219416257,0,1.29254038639679,0.955875191810208,2.89638276307112,2.26461224631066,0.404810701674894,1.46127928955656,1.97643888973262,8.67567554338879,10.7874464758284,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,1.8962205476149,1.05418608574999,6.18813259489121,1.02131881726136,0.18006109403131,0.129358683782755,0.643011105094777,1.77340233642274,0.891844088010353,0.822745103010605,0,0,0,0.882113592219848,7.58476763530808,5.32832608096488,14.4751019827574,9.43041517624778,5.25250879184196,0,4.07935664423121,0.170870880797853,0.206386867963223,0,0,0.13669422772102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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:26878 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O54905 | |||
|association_with_transcript=65bp_to_NM_020025,uc007cwy.2_5end | |||
|cluster_id=chr1:145487892..145487908,+ | |||
|description=CAGE_peak_2_at_B3galt2_5end | |||
|id=chr1:145487892..145487908,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.03e-19!102;UBERON:0000924!2.03e-19!102;UBERON:0006601!2.03e-19!102;UBERON:0000033!2.50e-15!63;UBERON:0002346!1.61e-13!71;UBERON:0003075!1.61e-13!71;UBERON:0007284!1.61e-13!71;UBERON:0001017!5.26e-13!73;UBERON:0005743!5.26e-13!73;UBERON:0000073!7.98e-13!75;UBERON:0001016!7.98e-13!75;UBERON:0001049!1.33e-12!52;UBERON:0005068!1.33e-12!52;UBERON:0006241!1.33e-12!52;UBERON:0007135!1.33e-12!52;UBERON:0000955!3.05e-12!50;UBERON:0006238!3.05e-12!50;UBERON:0003056!4.93e-12!49;UBERON:0002616!1.10e-11!49;UBERON:0002020!1.52e-11!34;UBERON:0003080!1.92e-10!40;UBERON:0002780!5.57e-10!39;UBERON:0001890!5.57e-10!39;UBERON:0006240!5.57e-10!39;UBERON:0002791!7.03e-10!29;UBERON:0003528!7.03e-10!29;UBERON:0001893!7.03e-10!29;UBERON:0000956!7.93e-09!21;UBERON:0001869!7.93e-09!21;UBERON:0000203!7.93e-09!21;UBERON:0002021!1.08e-08!10;UBERON:0000411!1.08e-08!10;UBERON:0001950!1.08e-08!10;UBERON:0007811!2.44e-08!86;UBERON:0000153!9.67e-08!94;UBERON:0002619!1.13e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.74e-19,73;UBERON:0004121,4.77e-19,95;UBERON:0000924,4.77e-19,95;UBERON:0006601,4.77e-19,95;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0000073,7.59e-13,54;UBERON:0001049,6.72e-12,52;UBERON:0005068,6.72e-12,52;UBERON:0006241,6.72e-12,52;UBERON:0007135,6.72e-12,52;UBERON:0002020,6.98e-12,34;UBERON:0001017,1.05e-11,73;UBERON:0001016,5.44e-11,75;UBERON:0003056,5.50e-11,49;UBERON:0002021,9.21e-11,10;UBERON:0000411,9.21e-11,10;UBERON:0001950,9.21e-11,10;UBERON:0000956,1.08e-10,21;UBERON:0001869,1.08e-10,21;UBERON:0000203,1.08e-10,21;UBERON:0000955,5.33e-10,47;UBERON:0006238,5.33e-10,47;UBERON:0003528,8.38e-10,29;UBERON:0002791,8.38e-10,29;UBERON:0001893,8.38e-10,29;UBERON:0010314,1.36e-09,92;UBERON:0002616,2.19e-09,46;UBERON:0002619,3.33e-09,17;UBERON:0003080,8.83e-09,40;UBERON:0002780,2.90e-08,39;UBERON:0001890,2.90e-08,39;UBERON:0006240,2.90e-08,39 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.8664130215526,1.35005938331691,2.3135745748652,1.99955689082663,2.20868540951614,1.46988959057945,0.862609239164127,1.83843757322004,3.30347642998166,3.06449611404451,3.68655679814984,0.395658863190582,0.274462930807229,0.52091337055676,0.837548997004143,4.50210088025344,2.13917546887534,4.71405736757868,4.27115042397309,1.86399445825301,0.075726193333184,0.453429360640713,0,0.860423876981386,0,0,0,0,2.80888840263504,0,0,0,5.21120653173718,0,0,0,0,0,0,2.05530983494308,3.6251303710604,8.46120192669501,0,0.304465478312141,0.230615497256059,0,0.470354828542819,6.03199638382442,0,41.5000154360146,0,2.91180329905337,2.87093973998512,2.90925151881133,1.86391761218122,1.46390398505774,2.30391377494801,0,0.11981512450592,0,0,4.19413790333504,3.66000482254901,2.89005009859588,11.9938780932671,16.6215047264715,4.1557608911912,8.27430441645564,0,11.8186622079588,2.52722758433675,7.36546495602659,0,1.14951052216736,1.62055916824814,2.10986744970001,1.49680298132921,2.17793324484245,1.3118241438362,10.3481348295606,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.648550476366846,1.31579988682799,1.97595103761946,1.34206418760372,15.9820360908737,7.82075054082562,0.330418782983798,0.793351699990633,0,0,0.128867461322093,0,0,0.190225626112559,0.949058123089023,0,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.995706366271836,0,0.228497025219458,0,0,0,0,0.126473074248515,0,0.784993639206874,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.655453258862952,0.690739927463582,1.15719246865209,0,0,8.35999264132362,17.1080782708934,3.37156238974363,3.39913891117389,0,11.1087207969924,0.315508219416257,0,1.29254038639679,0.955875191810208,2.89638276307112,2.26461224631066,0.404810701674894,1.46127928955656,1.97643888973262,8.67567554338879,10.7874464758284,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,1.8962205476149,1.05418608574999,6.18813259489121,1.02131881726136,0.18006109403131,0.129358683782755,0.643011105094777,1.77340233642274,0.891844088010353,0.822745103010605,0,0,0,0.882113592219848,7.58476763530808,5.32832608096488,14.4751019827574,9.43041517624778,5.25250879184196,0,4.07935664423121,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0.406638934253697,0,0.209088296014469,0,0.134864346384821,0.165306911450672,2.35580347785627,0.90730481304255,1.86401793926078,0,0,0,0,0,0,0,0.651021924219751,0.104859344425711,0.724752362478018,2.30424005006292,0.948033361884535,0,0,0,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.350630706544707,3.62768613784338,0,0,0,9.27310051354514,1.12609485270709,0.549454872801795,0.857473516316263,1.00314420807073,17.5073071211291,23.9369122983732,17.7597609166213,23.7157391634289,19.8673930733486,15.8632718451837,22.2757425076496,16.6618845192962,15.406841905463,12.4262474820437,0,0.399024873401031,0.512200817262403,0.243106717068294,1.67690530102386,1.10306105070008,2.889207461421,3.91466608753899,3.53011130550997,4.29585259998456,2.5347929989024,3.01802146217722,2.1537546718073,3.3293079250532,3.4461281373368,3.81034953026459,1.97003354106254,2.50781986602817,3.70877310722976,2.35518272215036,2.74295401908332,2.30718548007139,1.1921809497366,2.47088908274958,2.4468438907986,3.21535509988371,4.20734337607377,2.10455769150274,2.17286582153379,0,2.72860541685601,2.26560309463796,2.45538625901814,3.09873682371932,2.12197272079256,0.499621155875892,2.33931608445408,4.72716318906256,2.86932498103265,7.72069966918304,8.57910991795559 | |||
|short_description=p2@B3galt2 | |||
}} |
Revision as of 22:56, 4 August 2015
Short description: | p2@B3galt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B3galt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 65bp_to_NM_020025, uc007cwy.2_5end |
EntrezGene: | 26878 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.74e-19 | 73 |
ectoderm-derived structure | 4.77e-19 | 95 |
ectoderm | 4.77e-19 | 95 |
presumptive ectoderm | 4.77e-19 | 95 |
neurectoderm | 1.56e-13 | 64 |
neural plate | 1.56e-13 | 64 |
presumptive neural plate | 1.56e-13 | 64 |
regional part of nervous system | 7.59e-13 | 54 |
neural tube | 6.72e-12 | 52 |
neural rod | 6.72e-12 | 52 |
future spinal cord | 6.72e-12 | 52 |
neural keel | 6.72e-12 | 52 |
gray matter | 6.98e-12 | 34 |
central nervous system | 1.05e-11 | 73 |
nervous system | 5.44e-11 | 75 |
pre-chordal neural plate | 5.50e-11 | 49 |
occipital lobe | 9.21e-11 | 10 |
visual cortex | 9.21e-11 | 10 |
neocortex | 9.21e-11 | 10 |
cerebral cortex | 1.08e-10 | 21 |
cerebral hemisphere | 1.08e-10 | 21 |
pallium | 1.08e-10 | 21 |
brain | 5.33e-10 | 47 |
future brain | 5.33e-10 | 47 |
brain grey matter | 8.38e-10 | 29 |
regional part of telencephalon | 8.38e-10 | 29 |
telencephalon | 8.38e-10 | 29 |
structure with developmental contribution from neural crest | 1.36e-09 | 92 |
regional part of brain | 2.19e-09 | 46 |
regional part of cerebral cortex | 3.33e-09 | 17 |
anterior neural tube | 8.83e-09 | 40 |
regional part of forebrain | 2.90e-08 | 39 |
forebrain | 2.90e-08 | 39 |
future forebrain | 2.90e-08 | 39 |