FFCP PHASE1:Mm9::chr2:112079912..112079921,+: Difference between revisions
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{{FFCP|EntrezGene=99010|HGNC=|MCL_coexpression_id=0|UniProt=Q6NVG1|association_with_transcript=-76bp_to_NM_207206,uc008loo.1_5end|description=CAGE_peak_7_at_Lpcat4_5end|id=chr2:112079912..112079921,+|ontology_enrichment_celltype=CL:0000117!5.22e-10!23;CL:0000337!5.22e-10!23;CL:0000540!5.51e-08!33;CL:0000047!5.51e-08!33;CL:0000031!5.51e-08!33;CL:0000404!5.51e-08!33;CL:0002319!2.71e-07!43;CL:0000221!2.85e-07!44;CL:0000133!2.85e-07!44;CL:0000393!6.30e-07!39;CL:0000211!6.30e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-12,23;CL:0000337,1.31e-12,23;CL:0000540,3.22e-09,33;CL:0000047,3.22e-09,33;CL:0000031,3.22e-09,33;CL:0000404,3.22e-09,33;CL:0002610,1.84e-07,3;CL:0000393,2.52e-07,39;CL:0000211,2.52e-07,39;CL:0002614,6.14e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.74e-18!73;UBERON:0005743!2.74e-18!73;UBERON:0000073!3.02e-18!75;UBERON:0001016!3.02e-18!75;UBERON:0001049!4.05e-17!52;UBERON:0005068!4.05e-17!52;UBERON:0006241!4.05e-17!52;UBERON:0007135!4.05e-17!52;UBERON:0000955!6.61e-16!50;UBERON:0006238!6.61e-16!50;UBERON:0002616!2.53e-15!49;UBERON:0002020!3.04e-14!34;UBERON:0000033!3.10e-12!63;UBERON:0002791!3.70e-11!29;UBERON:0003528!3.70e-11!29;UBERON:0001893!3.70e-11!29;UBERON:0003080!4.75e-11!40;UBERON:0007811!1.84e-10!86;UBERON:0002780!2.04e-10!39;UBERON:0001890!2.04e-10!39;UBERON:0006240!2.04e-10!39;UBERON:0002346!2.58e-10!71;UBERON:0003075!2.58e-10!71;UBERON:0007284!2.58e-10!71;UBERON:0004121!4.29e-10!102;UBERON:0000924!4.29e-10!102;UBERON:0006601!4.29e-10!102;UBERON:0000153!6.03e-10!94;UBERON:0003056!2.73e-08!49;UBERON:0003076!2.60e-07!12;UBERON:0003057!2.60e-07!12;UBERON:0000956!6.65e-07!21;UBERON:0001869!6.65e-07!21;UBERON:0000203!6.65e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.53e-28,54;UBERON:0001017,5.76e-26,73;UBERON:0001049,3.44e-25,52;UBERON:0005068,3.44e-25,52;UBERON:0006241,3.44e-25,52;UBERON:0007135,3.44e-25,52;UBERON:0001016,4.64e-25,75;UBERON:0002020,2.20e-19,34;UBERON:0002346,3.58e-19,64;UBERON:0003075,3.58e-19,64;UBERON:0007284,3.58e-19,64;UBERON:0004121,4.21e-18,95;UBERON:0000924,4.21e-18,95;UBERON:0006601,4.21e-18,95;UBERON:0000955,5.37e-18,47;UBERON:0006238,5.37e-18,47;UBERON:0002616,8.85e-17,46;UBERON:0010371,5.77e-16,73;UBERON:0003076,6.82e-16,12;UBERON:0003057,6.82e-16,12;UBERON:0003080,1.34e-12,40;UBERON:0003528,1.55e-12,29;UBERON:0002791,1.55e-12,29;UBERON:0001893,1.55e-12,29;UBERON:0002240,3.35e-12,6;UBERON:0005174,3.35e-12,6;UBERON:0001137,3.35e-12,6;UBERON:0002780,2.46e-11,39;UBERON:0001890,2.46e-11,39;UBERON:0006240,2.46e-11,39;UBERON:0010314,2.83e-11,92;UBERON:0001948,4.72e-10,5;UBERON:0002315,4.72e-10,5;UBERON:0002021,1.51e-09,10;UBERON:0000411,1.51e-09,10;UBERON:0001950,1.51e-09,10;UBERON:0003056,1.68e-09,49;UBERON:0002950,6.21e-09,4;UBERON:0001891,6.21e-09,4;UBERON:0009616,6.21e-09,4;UBERON:0010286,6.21e-09,4;UBERON:0002420,1.58e-08,8;UBERON:0007245,1.58e-08,8;UBERON:0010009,1.58e-08,8;UBERON:0010011,1.58e-08,8;UBERON:0000454,1.58e-08,8;UBERON:0000025,7.80e-08,114;UBERON:0004684,1.84e-07,3;UBERON:0002275,1.84e-07,3;UBERON:0002038,6.14e-07,3;UBERON:0009663,6.14e-07,3;UBERON:0009661,6.14e-07,3;UBERON:0000125,6.14e-07,3;UBERON:0002308,6.14e-07,3;UBERON:0004111,6.67e-07,122|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0.700837921786577,0,0,0.234064526321993,0,0.159544317990673,0.171200729931206,0.174840804837995,0,0,0,0,0,0,4.33720779770456,0.496454756004426,0.522399578277871,0.47997726838022,0.45881856213434,0,0,0,0,0,0.443461021310609,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,2.35292595212406,0.683045484958446,0.971020706062307,0.125896817975577,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0.672187598284928,0.257259436035947,0,0.515672092277442,0.606949382578793,0,2.53532561402472,0,0,0,0,0,0.898800331555214,0.768436610643109,0.311068836925433,0.270011876663381,0.210324961351382,3.42781181284564,1.76694832761291,0,0.287536413054709,0.919218786610021,3.30347642998166,2.93680877595932,2.15049146558741,0.659431438650969,0.640413505216868,1.04182674111352,4.18774498502071,1.68828783009504,1.68078072554491,1.76777151284201,1.42371680799103,1.4911955666024,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0,1.25602267690966,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.67557365450764,0.255457055208591,0.11981512450592,0,0.127070227073065,2.84602214869163,1.83000241127451,1.63350657746724,2.25971616249959,2.55715457330331,1.87009240103604,2.43361894601636,0.305518091550949,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0,0.544291993210623,0,0,0,0.215567992932842,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,1.05144974282064,0.61742767427570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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:99010 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NVG1 | |||
|association_with_transcript=-76bp_to_NM_207206,uc008loo.1_5end | |||
|cluster_id=chr2:112079912..112079921,+ | |||
|description=CAGE_peak_7_at_Lpcat4_5end | |||
|id=chr2:112079912..112079921,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.22e-10!23;CL:0000337!5.22e-10!23;CL:0000540!5.51e-08!33;CL:0000047!5.51e-08!33;CL:0000031!5.51e-08!33;CL:0000404!5.51e-08!33;CL:0002319!2.71e-07!43;CL:0000221!2.85e-07!44;CL:0000133!2.85e-07!44;CL:0000393!6.30e-07!39;CL:0000211!6.30e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-12,23;CL:0000337,1.31e-12,23;CL:0000540,3.22e-09,33;CL:0000047,3.22e-09,33;CL:0000031,3.22e-09,33;CL:0000404,3.22e-09,33;CL:0002610,1.84e-07,3;CL:0000393,2.52e-07,39;CL:0000211,2.52e-07,39;CL:0002614,6.14e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.74e-18!73;UBERON:0005743!2.74e-18!73;UBERON:0000073!3.02e-18!75;UBERON:0001016!3.02e-18!75;UBERON:0001049!4.05e-17!52;UBERON:0005068!4.05e-17!52;UBERON:0006241!4.05e-17!52;UBERON:0007135!4.05e-17!52;UBERON:0000955!6.61e-16!50;UBERON:0006238!6.61e-16!50;UBERON:0002616!2.53e-15!49;UBERON:0002020!3.04e-14!34;UBERON:0000033!3.10e-12!63;UBERON:0002791!3.70e-11!29;UBERON:0003528!3.70e-11!29;UBERON:0001893!3.70e-11!29;UBERON:0003080!4.75e-11!40;UBERON:0007811!1.84e-10!86;UBERON:0002780!2.04e-10!39;UBERON:0001890!2.04e-10!39;UBERON:0006240!2.04e-10!39;UBERON:0002346!2.58e-10!71;UBERON:0003075!2.58e-10!71;UBERON:0007284!2.58e-10!71;UBERON:0004121!4.29e-10!102;UBERON:0000924!4.29e-10!102;UBERON:0006601!4.29e-10!102;UBERON:0000153!6.03e-10!94;UBERON:0003056!2.73e-08!49;UBERON:0003076!2.60e-07!12;UBERON:0003057!2.60e-07!12;UBERON:0000956!6.65e-07!21;UBERON:0001869!6.65e-07!21;UBERON:0000203!6.65e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.53e-28,54;UBERON:0001017,5.76e-26,73;UBERON:0001049,3.44e-25,52;UBERON:0005068,3.44e-25,52;UBERON:0006241,3.44e-25,52;UBERON:0007135,3.44e-25,52;UBERON:0001016,4.64e-25,75;UBERON:0002020,2.20e-19,34;UBERON:0002346,3.58e-19,64;UBERON:0003075,3.58e-19,64;UBERON:0007284,3.58e-19,64;UBERON:0004121,4.21e-18,95;UBERON:0000924,4.21e-18,95;UBERON:0006601,4.21e-18,95;UBERON:0000955,5.37e-18,47;UBERON:0006238,5.37e-18,47;UBERON:0002616,8.85e-17,46;UBERON:0010371,5.77e-16,73;UBERON:0003076,6.82e-16,12;UBERON:0003057,6.82e-16,12;UBERON:0003080,1.34e-12,40;UBERON:0003528,1.55e-12,29;UBERON:0002791,1.55e-12,29;UBERON:0001893,1.55e-12,29;UBERON:0002240,3.35e-12,6;UBERON:0005174,3.35e-12,6;UBERON:0001137,3.35e-12,6;UBERON:0002780,2.46e-11,39;UBERON:0001890,2.46e-11,39;UBERON:0006240,2.46e-11,39;UBERON:0010314,2.83e-11,92;UBERON:0001948,4.72e-10,5;UBERON:0002315,4.72e-10,5;UBERON:0002021,1.51e-09,10;UBERON:0000411,1.51e-09,10;UBERON:0001950,1.51e-09,10;UBERON:0003056,1.68e-09,49;UBERON:0002950,6.21e-09,4;UBERON:0001891,6.21e-09,4;UBERON:0009616,6.21e-09,4;UBERON:0010286,6.21e-09,4;UBERON:0002420,1.58e-08,8;UBERON:0007245,1.58e-08,8;UBERON:0010009,1.58e-08,8;UBERON:0010011,1.58e-08,8;UBERON:0000454,1.58e-08,8;UBERON:0000025,7.80e-08,114;UBERON:0004684,1.84e-07,3;UBERON:0002275,1.84e-07,3;UBERON:0002038,6.14e-07,3;UBERON:0009663,6.14e-07,3;UBERON:0009661,6.14e-07,3;UBERON:0000125,6.14e-07,3;UBERON:0002308,6.14e-07,3;UBERON:0004111,6.67e-07,122 | |||
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|short_description=p7@Lpcat4 | |||
}} |
Revision as of 08:56, 6 August 2015
Short description: | p7@Lpcat4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Lpcat4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -76bp_to_NM_207206, uc008loo.1_5end |
EntrezGene: | 99010 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.31e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-12 | 23 |
neuron | 3.22e-09 | 33 |
neuronal stem cell | 3.22e-09 | 33 |
neuroblast | 3.22e-09 | 33 |
electrically signaling cell | 3.22e-09 | 33 |
raphe nuclei neuron | 1.84e-07 | 3 |
electrically responsive cell | 2.52e-07 | 39 |
electrically active cell | 2.52e-07 | 39 |
neuron of the substantia nigra | 6.14e-07 | 3 |