FFCP PHASE1:Mm9::chr6:82889670..82889754,-: Difference between revisions
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{{FFCP|EntrezGene=20355|HGNC=|MCL_coexpression_id=1|UniProt=D3YWP2,Q9Z123,Q810B2|association_with_transcript=0bp_to_NM_001113481,NM_011350,uc009clo.2,uc012ent.1,uc012enu.1_5end|description=CAGE_peak_1_at_Sema4f_5end|id=chr6:82889670..82889754,-|ontology_enrichment_celltype=CL:0000221!2.21e-14!44;CL:0000133!2.21e-14!44;CL:0000540!2.31e-14!33;CL:0000047!2.31e-14!33;CL:0000031!2.31e-14!33;CL:0000404!2.31e-14!33;CL:0002319!4.86e-14!43;CL:0000117!1.50e-12!23;CL:0000337!1.50e-12!23;CL:0000055!7.71e-11!50;CL:0000393!1.04e-10!39;CL:0000211!1.04e-10!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.49e-16,33;CL:0000047,1.49e-16,33;CL:0000031,1.49e-16,33;CL:0000404,1.49e-16,33;CL:0000221,4.52e-16,44;CL:0000133,4.52e-16,44;CL:0002319,1.13e-15,43;CL:0000117,1.97e-14,23;CL:0000337,1.97e-14,23;CL:0000393,9.80e-12,39;CL:0000211,9.80e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.63e-30!75;UBERON:0001016!3.63e-30!75;UBERON:0001017!1.81e-29!73;UBERON:0005743!1.81e-29!73;UBERON:0001049!7.41e-23!52;UBERON:0005068!7.41e-23!52;UBERON:0006241!7.41e-23!52;UBERON:0007135!7.41e-23!52;UBERON:0004121!4.38e-22!102;UBERON:0000924!4.38e-22!102;UBERON:0006601!4.38e-22!102;UBERON:0000955!1.14e-21!50;UBERON:0006238!1.14e-21!50;UBERON:0002616!2.80e-21!49;UBERON:0002346!6.07e-21!71;UBERON:0003075!6.07e-21!71;UBERON:0007284!6.07e-21!71;UBERON:0000033!6.02e-20!63;UBERON:0002020!8.37e-18!34;UBERON:0003080!2.78e-17!40;UBERON:0002780!1.16e-16!39;UBERON:0001890!1.16e-16!39;UBERON:0006240!1.16e-16!39;UBERON:0003056!1.42e-16!49;UBERON:0002791!6.35e-15!29;UBERON:0003528!6.35e-15!29;UBERON:0001893!6.35e-15!29;UBERON:0007811!7.41e-15!86;UBERON:0000153!1.74e-14!94;UBERON:0000956!8.55e-11!21;UBERON:0001869!8.55e-11!21;UBERON:0000203!8.55e-11!21;UBERON:0002619!5.40e-09!17;UBERON:0002021!1.39e-07!10;UBERON:0000411!1.39e-07!10;UBERON:0001950!1.39e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.48e-34,75;UBERON:0001017,4.89e-33,73;UBERON:0000073,1.27e-26,54;UBERON:0004121,7.76e-26,95;UBERON:0000924,7.76e-26,95;UBERON:0006601,7.76e-26,95;UBERON:0001049,6.86e-25,52;UBERON:0005068,6.86e-25,52;UBERON:0006241,6.86e-25,52;UBERON:0007135,6.86e-25,52;UBERON:0002346,2.01e-23,64;UBERON:0003075,2.01e-23,64;UBERON:0007284,2.01e-23,64;UBERON:0000955,3.06e-21,47;UBERON:0006238,3.06e-21,47;UBERON:0002616,8.54e-21,46;UBERON:0002020,7.24e-20,34;UBERON:0010371,3.06e-19,73;UBERON:0003080,1.02e-18,40;UBERON:0002780,5.27e-18,39;UBERON:0001890,5.27e-18,39;UBERON:0006240,5.27e-18,39;UBERON:0003056,4.34e-17,49;UBERON:0003528,1.65e-16,29;UBERON:0002791,1.65e-16,29;UBERON:0001893,1.65e-16,29;UBERON:0010314,1.04e-11,92;UBERON:0000956,1.07e-11,21;UBERON:0001869,1.07e-11,21;UBERON:0000203,1.07e-11,21;UBERON:0002619,1.35e-09,17;UBERON:0002021,1.29e-08,10;UBERON:0000411,1.29e-08,10;UBERON:0001950,1.29e-08,10;UBERON:0005178,2.58e-07,17;UBERON:0005181,2.58e-07,17;UBERON:0002224,2.58e-07,17;UBERON:0000915,2.58e-07,17;UBERON:0008947,2.58e-07,17;UBERON:0003258,2.58e-07,17;UBERON:0000025,3.65e-07,114;UBERON:0011216,7.18e-07,194;UBERON:0003076,9.51e-07,12;UBERON:0003057,9.51e-07,12|phase1_expression=3.20297694209588,0,0,0,0,0,0,4.39019299701359,1.267098499365,0.936258105287974,0.171217968225505,0.8774937489487,10.9568467155972,16.4350356547715,0.333109761815663,0.404950534779652,0.699561878128147,1.41957974411207,1.23402990245165,0.42438965179803,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,15.0671387065287,5.4693474116666,7.85285615960697,19.9998705930545,15.7100461540443,22.3334762394331,0.755380907853464,0.608261587317087,0.550640256485045,2.34717403304412,0.436050312760893,1.5378032791413,0.972149495371417,2.2397827460058,0,0.167782606057736,7.25362142011344,6.72187598284928,0,0.286533439938757,0,11.3297218081375,13.2247744818008,10.1413024560989,2.03306719241479,4.4464739805557,0,0.988866362566974,0,17.9760066311043,5.76327457982332,8.70992743391212,13.2305819565057,10.0955981448663,16.5677570954206,15.4607978666129,8.45186514583183,5.271500906003,10.1114066527102,19.82085857989,19.9192247412893,19.6616362567992,12.1335384711778,8.69132614222892,10.939180781692,21.7762739221077,26.449842671489,20.4749652020926,15.9099436155781,15.5185132071022,20.1311401491325,2.42323818666189,14.1318817399689,0,0.860423876981386,0,0,0,0,1.12355536105401,0,0.259786004602869,0,5.7745802108439,0,0,0,3.68034769719064,5.32055717497707,3.53867111510348,1.1418387971906,4.40194402200192,0.742210695324124,1.73485326766136,3.04465478312141,0.922461989024234,1.05505848386836,0.705532242814229,0.125666591329675,0,0.144599356919912,2.65383165584962,0.161766849947409,0.441683036920787,0.484875253135222,0,25.4719293400046,30.1603257811375,0.255457055208591,0,0,0,19.0234112044125,11.4375150704657,10.8062742817063,17.7300806596122,19.9458056717658,12.8828587626927,13.6282660976916,0.611036183101898,0.622034853050465,0.252722758433675,0.631325567659422,1.04096354370163,2.06911893990126,1.44049703844279,0.90422890701429,1.836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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20355 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YWP2,uniprot:Q9Z123,uniprot:Q810B2 | |||
|association_with_transcript=0bp_to_NM_001113481,NM_011350,uc009clo.2,uc012ent.1,uc012enu.1_5end | |||
|cluster_id=chr6:82889670..82889754,- | |||
|description=CAGE_peak_1_at_Sema4f_5end | |||
|id=chr6:82889670..82889754,- | |||
|ontology_enrichment_celltype=CL:0000221!2.21e-14!44;CL:0000133!2.21e-14!44;CL:0000540!2.31e-14!33;CL:0000047!2.31e-14!33;CL:0000031!2.31e-14!33;CL:0000404!2.31e-14!33;CL:0002319!4.86e-14!43;CL:0000117!1.50e-12!23;CL:0000337!1.50e-12!23;CL:0000055!7.71e-11!50;CL:0000393!1.04e-10!39;CL:0000211!1.04e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.49e-16,33;CL:0000047,1.49e-16,33;CL:0000031,1.49e-16,33;CL:0000404,1.49e-16,33;CL:0000221,4.52e-16,44;CL:0000133,4.52e-16,44;CL:0002319,1.13e-15,43;CL:0000117,1.97e-14,23;CL:0000337,1.97e-14,23;CL:0000393,9.80e-12,39;CL:0000211,9.80e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.63e-30!75;UBERON:0001016!3.63e-30!75;UBERON:0001017!1.81e-29!73;UBERON:0005743!1.81e-29!73;UBERON:0001049!7.41e-23!52;UBERON:0005068!7.41e-23!52;UBERON:0006241!7.41e-23!52;UBERON:0007135!7.41e-23!52;UBERON:0004121!4.38e-22!102;UBERON:0000924!4.38e-22!102;UBERON:0006601!4.38e-22!102;UBERON:0000955!1.14e-21!50;UBERON:0006238!1.14e-21!50;UBERON:0002616!2.80e-21!49;UBERON:0002346!6.07e-21!71;UBERON:0003075!6.07e-21!71;UBERON:0007284!6.07e-21!71;UBERON:0000033!6.02e-20!63;UBERON:0002020!8.37e-18!34;UBERON:0003080!2.78e-17!40;UBERON:0002780!1.16e-16!39;UBERON:0001890!1.16e-16!39;UBERON:0006240!1.16e-16!39;UBERON:0003056!1.42e-16!49;UBERON:0002791!6.35e-15!29;UBERON:0003528!6.35e-15!29;UBERON:0001893!6.35e-15!29;UBERON:0007811!7.41e-15!86;UBERON:0000153!1.74e-14!94;UBERON:0000956!8.55e-11!21;UBERON:0001869!8.55e-11!21;UBERON:0000203!8.55e-11!21;UBERON:0002619!5.40e-09!17;UBERON:0002021!1.39e-07!10;UBERON:0000411!1.39e-07!10;UBERON:0001950!1.39e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.48e-34,75;UBERON:0001017,4.89e-33,73;UBERON:0000073,1.27e-26,54;UBERON:0004121,7.76e-26,95;UBERON:0000924,7.76e-26,95;UBERON:0006601,7.76e-26,95;UBERON:0001049,6.86e-25,52;UBERON:0005068,6.86e-25,52;UBERON:0006241,6.86e-25,52;UBERON:0007135,6.86e-25,52;UBERON:0002346,2.01e-23,64;UBERON:0003075,2.01e-23,64;UBERON:0007284,2.01e-23,64;UBERON:0000955,3.06e-21,47;UBERON:0006238,3.06e-21,47;UBERON:0002616,8.54e-21,46;UBERON:0002020,7.24e-20,34;UBERON:0010371,3.06e-19,73;UBERON:0003080,1.02e-18,40;UBERON:0002780,5.27e-18,39;UBERON:0001890,5.27e-18,39;UBERON:0006240,5.27e-18,39;UBERON:0003056,4.34e-17,49;UBERON:0003528,1.65e-16,29;UBERON:0002791,1.65e-16,29;UBERON:0001893,1.65e-16,29;UBERON:0010314,1.04e-11,92;UBERON:0000956,1.07e-11,21;UBERON:0001869,1.07e-11,21;UBERON:0000203,1.07e-11,21;UBERON:0002619,1.35e-09,17;UBERON:0002021,1.29e-08,10;UBERON:0000411,1.29e-08,10;UBERON:0001950,1.29e-08,10;UBERON:0005178,2.58e-07,17;UBERON:0005181,2.58e-07,17;UBERON:0002224,2.58e-07,17;UBERON:0000915,2.58e-07,17;UBERON:0008947,2.58e-07,17;UBERON:0003258,2.58e-07,17;UBERON:0000025,3.65e-07,114;UBERON:0011216,7.18e-07,194;UBERON:0003076,9.51e-07,12;UBERON:0003057,9.51e-07,12 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0,4.39019299701359,1.267098499365,0.936258105287974,0.171217968225505,0.8774937489487,10.9568467155972,16.4350356547715,0.333109761815663,0.404950534779652,0.699561878128147,1.41957974411207,1.23402990245165,0.42438965179803,7.48380953329414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,15.0671387065287,5.4693474116666,7.85285615960697,19.9998705930545,15.7100461540443,22.3334762394331,0.755380907853464,0.608261587317087,0.550640256485045,2.34717403304412,0.436050312760893,1.5378032791413,0.972149495371417,2.2397827460058,0,0.167782606057736,7.25362142011344,6.72187598284928,0,0.286533439938757,0,11.3297218081375,13.2247744818008,10.1413024560989,2.03306719241479,4.4464739805557,0,0.988866362566974,0,17.9760066311043,5.76327457982332,8.70992743391212,13.2305819565057,10.0955981448663,16.5677570954206,15.4607978666129,8.45186514583183,5.271500906003,10.1114066527102,19.82085857989,19.9192247412893,19.6616362567992,12.1335384711778,8.69132614222892,10.939180781692,21.7762739221077,26.449842671489,20.4749652020926,15.9099436155781,15.5185132071022,20.1311401491325,2.42323818666189,14.1318817399689,0,0.860423876981386,0,0,0,0,1.12355536105401,0,0.259786004602869,0,5.7745802108439,0,0,0,3.68034769719064,5.32055717497707,3.53867111510348,1.1418387971906,4.40194402200192,0.742210695324124,1.73485326766136,3.04465478312141,0.922461989024234,1.05505848386836,0.705532242814229,0.125666591329675,0,0.144599356919912,2.65383165584962,0.161766849947409,0.441683036920787,0.484875253135222,0,25.4719293400046,30.1603257811375,0.255457055208591,0,0,0,19.0234112044125,11.4375150704657,10.8062742817063,17.7300806596122,19.9458056717658,12.8828587626927,13.6282660976916,0.611036183101898,0.622034853050465,0.252722758433675,0.631325567659422,1.04096354370163,2.06911893990126,1.44049703844279,0.90422890701429,1.83698547708585,2.43416068541215,2.15513966487376,3.3631438196072,0.646703978798527,0.945530400839096,2.28736461413134,1.53437012699302,0.834141747676794,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0.32833492815819,0.162137619091711,0,0,0,17.6643556793867,15.8473103064098,0.330418782983798,0,1.49301775374664,1.39342003116263,1.15980715189884,0.403367049246685,0.444756087689741,0,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.799739588268102,0,0.814605311381257,0.581857461502877,0.631222379012867,0.189709611372772,0,0,0.123397163921801,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0.624075346229121,0,0,0,4.98833613449833,5.30575952957357,5.70377417547091,6.78980343100753,9.38760993154008,11.5579317634853,9.04565835366852,11.1226179278945,4.25614889086716,5.09368786192182,5.58091690301205,7.20998584749247,5.69860440157455,8.67894351489069,0,0,0,0,14.9312048688647,16.175212749724,0,0,2.2085575359138,1.17131623288992,3.01592756825919,6.21318874676635,15.81870585985,19.8153571552183,1.61924280669958,5.26060544240361,4.74345333535828,7.06906896127976,0.141940085208269,1.6025904330053,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,1.03371317267288,0,0.356497378384721,0,0,0,3.40439605753788,0.900305470156551,2.8458910432206,3.00071849044229,2.30542303734956,3.21063871683727,6.41741180348272,4.56697423671899,0,0,1.10264199027481,0.65954501176592,0,0,0.119372344003136,0.492422699235184,0.291480836629851,12.9797711407357,0.854354403989263,0,0.185194527369712,0.565105371014073,0.683471138605126,0,0.169978429993855,0.139951452323658,0.276399947608848,0,1.73984796469624,1.21991680276109,0.972048067396211,0.836353184057875,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,1.12738587736838,0.598066184175915,0.827292452285488,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,1.17183946359555,3.77493639932559,1.93267296660805,1.15212002503146,0.632022241256357,0.608175645870493,0.410843828659309,0.25984164595559,0.895133478337407,0.993406773906324,1.32214994471966,1.18151621739662,0.302899349844443,1.143102099825,0.201652370273681,0.877120926657772,0.769694733122636,1.40252282617883,0.226730383615211,1.10992976687032,0.62799699626633,0.335769232728157,0.19318959403219,0,0.183151624267265,0.643105137237198,0.501572104035363,22.0253218620656,23.476587061866,20.6242384838183,25.9498305338968,16.4419804744954,24.1726047164704,23.6257875081132,18.9134905354173,12.2348450425735,17.0860902878101,0.93408612825759,4.38927360741134,3.07320490357441,2.67417388775123,1.88651846365184,0.551530525350042,2.44471400581777,2.47242068686673,4.1719497246936,2.52697211763797,1.52087579934144,3.39527414494937,2.62196220915671,2.94515701062399,2.52716063404698,0.952587382566147,3.24476112645595,2.70072908649187,4.53294490883637,2.79677948255355,2.05721551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| |||
|short_description=p1@Sema4f | |||
}} |
Revision as of 04:01, 6 August 2015
Short description: | p1@Sema4f |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sema4f_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_001113481, NM_011350, uc009clo.2, uc012ent.1, uc012enu.1_5end |
EntrezGene: | 20355 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.49e-16 | 33 |
neuronal stem cell | 1.49e-16 | 33 |
neuroblast | 1.49e-16 | 33 |
electrically signaling cell | 1.49e-16 | 33 |
ectodermal cell | 4.52e-16 | 44 |
neurectodermal cell | 4.52e-16 | 44 |
neural cell | 1.13e-15 | 43 |
CNS neuron (sensu Vertebrata) | 1.97e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-14 | 23 |
electrically responsive cell | 9.80e-12 | 39 |
electrically active cell | 9.80e-12 | 39 |