FFCP PHASE1:Mm9::chr7:51697359..51697392,+: Difference between revisions
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{{FFCP|EntrezGene=272381|HGNC=|MCL_coexpression_id=13|UniProt=P0C192|association_with_transcript=-462bp_to_ENSMUST00000058667_5end|description=CAGE_peak_1_at_Lrrc4b_5end|id=chr7:51697359..51697392,+|ontology_enrichment_celltype=CL:0000540!5.12e-20!33;CL:0000047!5.12e-20!33;CL:0000031!5.12e-20!33;CL:0000404!5.12e-20!33;CL:0000221!2.20e-19!44;CL:0000133!2.20e-19!44;CL:0002319!5.52e-19!43;CL:0000117!4.56e-16!23;CL:0000337!4.56e-16!23;CL:0000393!2.13e-14!39;CL:0000211!2.13e-14!39;CL:0000055!1.37e-13!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.49e-21,33;CL:0000047,1.49e-21,33;CL:0000031,1.49e-21,33;CL:0000404,1.49e-21,33;CL:0000221,6.23e-20,44;CL:0000133,6.23e-20,44;CL:0002319,1.68e-19,43;CL:0000117,2.84e-17,23;CL:0000337,2.84e-17,23;CL:0000393,2.45e-15,39;CL:0000211,2.45e-15,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.45e-35!73;UBERON:0005743!3.45e-35!73;UBERON:0000073!2.13e-34!75;UBERON:0001016!2.13e-34!75;UBERON:0004121!2.00e-30!102;UBERON:0000924!2.00e-30!102;UBERON:0006601!2.00e-30!102;UBERON:0002346!6.43e-28!71;UBERON:0003075!6.43e-28!71;UBERON:0007284!6.43e-28!71;UBERON:0001049!2.63e-24!52;UBERON:0005068!2.63e-24!52;UBERON:0006241!2.63e-24!52;UBERON:0007135!2.63e-24!52;UBERON:0000033!3.84e-24!63;UBERON:0000955!8.64e-23!50;UBERON:0006238!8.64e-23!50;UBERON:0002616!2.99e-22!49;UBERON:0003056!1.76e-20!49;UBERON:0002020!2.40e-20!34;UBERON:0003080!1.51e-18!40;UBERON:0002780!4.38e-18!39;UBERON:0001890!4.38e-18!39;UBERON:0006240!4.38e-18!39;UBERON:0002791!5.01e-17!29;UBERON:0003528!5.01e-17!29;UBERON:0001893!5.01e-17!29;UBERON:0000956!4.95e-12!21;UBERON:0001869!4.95e-12!21;UBERON:0000203!4.95e-12!21;UBERON:0000025!3.52e-10!114;UBERON:0007811!3.62e-10!86;UBERON:0002619!1.40e-09!17;UBERON:0004111!1.65e-09!122;UBERON:0000153!4.10e-09!94;UBERON:0000468!3.36e-07!333;UBERON:0002021!5.41e-07!10;UBERON:0000411!5.41e-07!10;UBERON:0001950!5.41e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-37,73;UBERON:0001016,4.07e-36,75;UBERON:0010314,1.84e-31,92;UBERON:0004121,6.61e-31,95;UBERON:0000924,6.61e-31,95;UBERON:0006601,6.61e-31,95;UBERON:0002346,1.95e-29,64;UBERON:0003075,1.95e-29,64;UBERON:0007284,1.95e-29,64;UBERON:0000073,3.60e-27,54;UBERON:0001049,1.24e-25,52;UBERON:0005068,1.24e-25,52;UBERON:0006241,1.24e-25,52;UBERON:0007135,1.24e-25,52;UBERON:0010371,2.97e-24,73;UBERON:0003056,4.68e-22,49;UBERON:0000955,5.36e-22,47;UBERON:0006238,5.36e-22,47;UBERON:0002020,6.56e-22,34;UBERON:0002616,1.99e-21,46;UBERON:0003080,5.85e-20,40;UBERON:0002780,1.85e-19,39;UBERON:0001890,1.85e-19,39;UBERON:0006240,1.85e-19,39;UBERON:0003528,2.59e-18,29;UBERON:0002791,2.59e-18,29;UBERON:0001893,2.59e-18,29;UBERON:0000956,6.68e-13,21;UBERON:0001869,6.68e-13,21;UBERON:0000203,6.68e-13,21;UBERON:0000025,3.61e-11,114;UBERON:0002619,3.03e-10,17;UBERON:0004111,3.90e-10,122;UBERON:0002021,1.90e-07,10;UBERON:0000411,1.90e-07,10;UBERON:0001950,1.90e-07,10|phase1_expression=9.44878197918284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86502165752409,0,0,0,0,0,0,0,0,0,0,4.44521471421742,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,2.19686182734472,2.52758868796568,2.65974201088189,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,83.7590147958735,79.3486468908049,65.9184659646426,0,0,0,0,0,14.9800055259202,33.4269925629752,55.577632197344,77.2233967257271,72.141461743524,59.7010557403949,68.6901162359518,62.9602707964864,72.171639676732,69.8606277823616,50.6533052597188,49.0319378247121,51.4581886408416,81.63761210499,91.9450818204217,108.349981075806,39.0856198601933,42.207195752376,54.8545709518748,52.7385167997865,59.3689908932259,66.7310016054576,0.37863096666592,1.36028808192214,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,12.9575946194546,0,0,0,0,0,0,1.1418387971906,0,1.63286352971307,5.72501578328248,7.00270600117925,5.5347719341454,4.6724018571313,2.82212897125692,0.879666139307728,0,0,0,0.323533699894818,0,0,0,39.8181883935704,58.6450779077674,0.510914110417183,0,0,0,26.9623150928681,28.8225379775735,70.3664371832041,36.1554585999935,61.115994301949,30.1292664611362,51.1059978663437,1.83310854930569,0.124406970610093,0,1.05220927943237,6.76626303406059,4.82794419310293,7.38254732201932,13.2620239695429,10.9538763633638,14.2206229516183,15.9292931751539,6.98499100995342,0.431135985865684,0.378212160335639,1.23165786914764,1.53437012699302,0.556094498451196,1.39300866608867,0.411564272815887,1.99034266818493,0,0,0,4.34964122324554,6.3322036194896,10.8037236876609,7.57583153872673,12.3961466000864,11.7243005794407,14.6496385192757,12.6088498657821,8.05680862333469,15.3040660419537,9.85004784474571,3.89130285820108,5.26319954731196,1.75640092232841,2.54992195644706,33.4361018216962,57.6265829323993,0,0.264450566663544,1.70630600428187,3.48355007790658,1.41754207454303,1.4117846723634,1.33426826306922,1.14135375667535,0,1.31759163779209,1.25667604400135,0.994782360205754,1.16978452271472,0.898819408654221,0.216138049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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:272381 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P0C192 | |||
|association_with_transcript=-462bp_to_ENSMUST00000058667_5end | |||
|cluster_id=chr7:51697359..51697392,+ | |||
|description=CAGE_peak_1_at_Lrrc4b_5end | |||
|id=chr7:51697359..51697392,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.12e-20!33;CL:0000047!5.12e-20!33;CL:0000031!5.12e-20!33;CL:0000404!5.12e-20!33;CL:0000221!2.20e-19!44;CL:0000133!2.20e-19!44;CL:0002319!5.52e-19!43;CL:0000117!4.56e-16!23;CL:0000337!4.56e-16!23;CL:0000393!2.13e-14!39;CL:0000211!2.13e-14!39;CL:0000055!1.37e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.49e-21,33;CL:0000047,1.49e-21,33;CL:0000031,1.49e-21,33;CL:0000404,1.49e-21,33;CL:0000221,6.23e-20,44;CL:0000133,6.23e-20,44;CL:0002319,1.68e-19,43;CL:0000117,2.84e-17,23;CL:0000337,2.84e-17,23;CL:0000393,2.45e-15,39;CL:0000211,2.45e-15,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.45e-35!73;UBERON:0005743!3.45e-35!73;UBERON:0000073!2.13e-34!75;UBERON:0001016!2.13e-34!75;UBERON:0004121!2.00e-30!102;UBERON:0000924!2.00e-30!102;UBERON:0006601!2.00e-30!102;UBERON:0002346!6.43e-28!71;UBERON:0003075!6.43e-28!71;UBERON:0007284!6.43e-28!71;UBERON:0001049!2.63e-24!52;UBERON:0005068!2.63e-24!52;UBERON:0006241!2.63e-24!52;UBERON:0007135!2.63e-24!52;UBERON:0000033!3.84e-24!63;UBERON:0000955!8.64e-23!50;UBERON:0006238!8.64e-23!50;UBERON:0002616!2.99e-22!49;UBERON:0003056!1.76e-20!49;UBERON:0002020!2.40e-20!34;UBERON:0003080!1.51e-18!40;UBERON:0002780!4.38e-18!39;UBERON:0001890!4.38e-18!39;UBERON:0006240!4.38e-18!39;UBERON:0002791!5.01e-17!29;UBERON:0003528!5.01e-17!29;UBERON:0001893!5.01e-17!29;UBERON:0000956!4.95e-12!21;UBERON:0001869!4.95e-12!21;UBERON:0000203!4.95e-12!21;UBERON:0000025!3.52e-10!114;UBERON:0007811!3.62e-10!86;UBERON:0002619!1.40e-09!17;UBERON:0004111!1.65e-09!122;UBERON:0000153!4.10e-09!94;UBERON:0000468!3.36e-07!333;UBERON:0002021!5.41e-07!10;UBERON:0000411!5.41e-07!10;UBERON:0001950!5.41e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-37,73;UBERON:0001016,4.07e-36,75;UBERON:0010314,1.84e-31,92;UBERON:0004121,6.61e-31,95;UBERON:0000924,6.61e-31,95;UBERON:0006601,6.61e-31,95;UBERON:0002346,1.95e-29,64;UBERON:0003075,1.95e-29,64;UBERON:0007284,1.95e-29,64;UBERON:0000073,3.60e-27,54;UBERON:0001049,1.24e-25,52;UBERON:0005068,1.24e-25,52;UBERON:0006241,1.24e-25,52;UBERON:0007135,1.24e-25,52;UBERON:0010371,2.97e-24,73;UBERON:0003056,4.68e-22,49;UBERON:0000955,5.36e-22,47;UBERON:0006238,5.36e-22,47;UBERON:0002020,6.56e-22,34;UBERON:0002616,1.99e-21,46;UBERON:0003080,5.85e-20,40;UBERON:0002780,1.85e-19,39;UBERON:0001890,1.85e-19,39;UBERON:0006240,1.85e-19,39;UBERON:0003528,2.59e-18,29;UBERON:0002791,2.59e-18,29;UBERON:0001893,2.59e-18,29;UBERON:0000956,6.68e-13,21;UBERON:0001869,6.68e-13,21;UBERON:0000203,6.68e-13,21;UBERON:0000025,3.61e-11,114;UBERON:0002619,3.03e-10,17;UBERON:0004111,3.90e-10,122;UBERON:0002021,1.90e-07,10;UBERON:0000411,1.90e-07,10;UBERON:0001950,1.90e-07,10 | |||
|phase1_expression=9.44878197918284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86502165752409,0,0,0,0,0,0,0,0,0,0,4.44521471421742,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,2.19686182734472,2.52758868796568,2.65974201088189,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,83.7590147958735,79.3486468908049,65.9184659646426,0,0,0,0,0,14.9800055259202,33.4269925629752,55.577632197344,77.2233967257271,72.141461743524,59.7010557403949,68.6901162359518,62.9602707964864,72.171639676732,69.8606277823616,50.6533052597188,49.0319378247121,51.4581886408416,81.63761210499,91.9450818204217,108.349981075806,39.0856198601933,42.207195752376,54.8545709518748,52.7385167997865,59.3689908932259,66.7310016054576,0.37863096666592,1.36028808192214,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,12.9575946194546,0,0,0,0,0,0,1.1418387971906,0,1.63286352971307,5.72501578328248,7.00270600117925,5.5347719341454,4.6724018571313,2.82212897125692,0.879666139307728,0,0,0,0.323533699894818,0,0,0,39.8181883935704,58.6450779077674,0.510914110417183,0,0,0,26.9623150928681,28.8225379775735,70.3664371832041,36.1554585999935,61.115994301949,30.1292664611362,51.1059978663437,1.83310854930569,0.124406970610093,0,1.05220927943237,6.76626303406059,4.82794419310293,7.38254732201932,13.2620239695429,10.9538763633638,14.2206229516183,15.9292931751539,6.98499100995342,0.431135985865684,0.378212160335639,1.23165786914764,1.53437012699302,0.556094498451196,1.39300866608867,0.411564272815887,1.99034266818493,0,0,0,4.34964122324554,6.3322036194896,10.8037236876609,7.57583153872673,12.3961466000864,11.7243005794407,14.6496385192757,12.6088498657821,8.05680862333469,15.3040660419537,9.85004784474571,3.89130285820108,5.26319954731196,1.75640092232841,2.54992195644706,33.4361018216962,57.6265829323993,0,0.264450566663544,1.70630600428187,3.48355007790658,1.41754207454303,1.4117846723634,1.33426826306922,1.14135375667535,0,1.31759163779209,1.25667604400135,0.994782360205754,1.16978452271472,0.898819408654221,0.216138049874694,0.199141273254367,0.569003702859245,2.28497025219458,0,1.01825663922657,2.71533482034676,0.631222379012867,0.442655759869801,0.147610147979602,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,2.84237117655727,1.46668478797823,3.73439188705414,5.86725620721255,1.34005005953453,2.38043640886014,1.36593553500459,3.94087860265477,4.4292937929755,2.55127629851979,1.3109065177259,2.07221978239075,0.723245292907558,0,0,0,0,23.2798355482298,42.665053919562,0.491804836130026,0,12.304820557234,8.98009111882268,35.1140138304462,29.871099744069,29.409424978876,30.0061122636162,20.2405350837447,28.9333299332199,20.1596766752727,34.7027021735552,0.99358059645788,7.30068975035746,2.93196526836437,3.46437258242324,0,2.42780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,1.03371317267288,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.70219802876894,5.94201610303324,6.46793418913772,3.64372959553707,1.95074257006501,4.10248280484762,6.74650984468696,7.61162372786498,0,0,0.220528398054962,0.16488625294148,0,0.482503399425247,0.119372344003136,0,0.874442509889552,26.3303928854924,0,1.23832120777933,0.370389054739423,0.376736914009382,0,0,0,0,0,0,1.10717597753397,2.03319467126849,3.02414954301044,1.67270636811575,1.9652630737156,1.75323650300267,0.578574190077352,0,0.129614973291793,0,0,0,0.496375471371293,0.388902376688095,1.03327858782185,1.18269287843545,1.5256441023948,1.0416350787516,1.57289016638566,0,0,0,1.41907650703115,0.410843828659309,0.129920822977795,0.358053391334963,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,1.46521299413812,1.2862102744744,0,62.6874545304944,42.8102469951675,53.8521782633033,69.4286856668498,62.3425092991284,43.8128460486026,41.1763725141402,45.032120322422,41.6891016265468,40.9030646283938,3.84013186061454,9.97562183502578,8.36594668195257,7.05009479498053,5.03071590307158,7.90527086335061,5.33392146723877,4.73880631649457,7.06022261101994,6.82282471762253,4.30914809813408,6.41329560712659,5.3375659257833,8.64339557465735,7.40917549527411,8.09699275181225,7.76424983830532,8.29509647993932,10.714233420886,6.18235464564469,6.85738504770831,7.98641127717019,9.29901140794552,7.26732083161643,6.30532848782715,7.95377314181759,5.85369513192872,5.78753365163254,8.01244271690584,5.61142271657738,6.52492599682958,9.45643030805409,9.82154503607254,9.29621047115796,7.33045121728337,17.4867404556562,5.38042699424439,5.15690529715916,3.63447830930802,1.76473135295612,0.695603506861264 | |||
|short_description=p1@Lrrc4b | |||
}} |
Revision as of 06:20, 5 August 2015
Short description: | p1@Lrrc4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -462bp_to_ENSMUST00000058667_5end |
EntrezGene: | 272381 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.49e-21 | 33 |
neuronal stem cell | 1.49e-21 | 33 |
neuroblast | 1.49e-21 | 33 |
electrically signaling cell | 1.49e-21 | 33 |
ectodermal cell | 6.23e-20 | 44 |
neurectodermal cell | 6.23e-20 | 44 |
neural cell | 1.68e-19 | 43 |
CNS neuron (sensu Vertebrata) | 2.84e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.84e-17 | 23 |
electrically responsive cell | 2.45e-15 | 39 |
electrically active cell | 2.45e-15 | 39 |