FFCP PHASE1:Mm9::chr8:48374677..48374703,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=71069|HGNC=|MCL_coexpression_id=3678|UniProt=Q499E5|association_with_transcript=52bp_to_ENSMUST00000079195,NM_001114311,uc009lqw.2,uc009lqx.2_5end|description=CAGE_peak_4_at_Stox2_5end|id=chr8:48374677..48374703,-|ontology_enrichment_celltype=CL:0000221!4.66e-15!44;CL:0000133!4.66e-15!44;CL:0002319!5.00e-15!43;CL:0000540!9.23e-15!33;CL:0000047!9.23e-15!33;CL:0000031!9.23e-15!33;CL:0000404!9.23e-15!33;CL:0000117!4.08e-14!23;CL:0000337!4.08e-14!23;CL:0000393!2.06e-12!39;CL:0000211!2.06e-12!39;CL:0000055!2.17e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-19,23;CL:0000337,1.57e-19,23;CL:0000540,1.39e-17,33;CL:0000047,1.39e-17,33;CL:0000031,1.39e-17,33;CL:0000404,1.39e-17,33;CL:0002319,5.07e-17,43;CL:0000221,2.38e-16,44;CL:0000133,2.38e-16,44;CL:0000393,3.13e-13,39;CL:0000211,3.13e-13,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.41e-22!73;UBERON:0005743!1.41e-22!73;UBERON:0000073!7.70e-22!75;UBERON:0001016!7.70e-22!75;UBERON:0004121!1.99e-20!102;UBERON:0000924!1.99e-20!102;UBERON:0006601!1.99e-20!102;UBERON:0002346!3.76e-17!71;UBERON:0003075!3.76e-17!71;UBERON:0007284!3.76e-17!71;UBERON:0000033!4.26e-16!63;UBERON:0001049!4.89e-15!52;UBERON:0005068!4.89e-15!52;UBERON:0006241!4.89e-15!52;UBERON:0007135!4.89e-15!52;UBERON:0003056!1.11e-13!49;UBERON:0000955!3.85e-13!50;UBERON:0006238!3.85e-13!50;UBERON:0002616!1.18e-12!49;UBERON:0002020!1.36e-11!34;UBERON:0003080!2.80e-10!40;UBERON:0002780!8.00e-10!39;UBERON:0001890!8.00e-10!39;UBERON:0006240!8.00e-10!39;UBERON:0002791!1.90e-08!29;UBERON:0003528!1.90e-08!29;UBERON:0001893!1.90e-08!29;UBERON:0000153!2.48e-08!94;UBERON:0000468!6.93e-08!333;UBERON:0007811!8.96e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.77e-26,73;UBERON:0001016,4.88e-25,75;UBERON:0004121,1.57e-23,95;UBERON:0000924,1.57e-23,95;UBERON:0006601,1.57e-23,95;UBERON:0002346,2.66e-23,64;UBERON:0003075,2.66e-23,64;UBERON:0007284,2.66e-23,64;UBERON:0000073,4.73e-20,54;UBERON:0010371,4.94e-19,73;UBERON:0001049,7.59e-19,52;UBERON:0005068,7.59e-19,52;UBERON:0006241,7.59e-19,52;UBERON:0007135,7.59e-19,52;UBERON:0003056,1.25e-15,49;UBERON:0002020,1.25e-14,34;UBERON:0010314,1.77e-14,92;UBERON:0000955,2.40e-14,47;UBERON:0006238,2.40e-14,47;UBERON:0002616,1.08e-13,46;UBERON:0003080,6.81e-12,40;UBERON:0002780,2.81e-11,39;UBERON:0001890,2.81e-11,39;UBERON:0006240,2.81e-11,39;UBERON:0003528,2.84e-10,29;UBERON:0002791,2.84e-10,29;UBERON:0001893,2.84e-10,29;UBERON:0003076,3.03e-08,12;UBERON:0003057,3.03e-08,12;UBERON:0002240,2.38e-07,6;UBERON:0005174,2.38e-07,6;UBERON:0001137,2.38e-07,6;UBERON:0002420,2.55e-07,8;UBERON:0007245,2.55e-07,8;UBERON:0010009,2.55e-07,8;UBERON:0010011,2.55e-07,8;UBERON:0000454,2.55e-07,8|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.367093504323363,0,2.39827672018491,0.659058548203415,1.36100929351998,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,4.85559506063035,5.28990979272033,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,1.79760066311043,4.2264013585371,2.28117147078651,2.16009501330705,2.52389953621658,4.85606673486466,3.97563373712904,1.83736198822431,2.1086003624012,2.75765635983006,3.30347642998166,1.78762273319263,2.30409799884365,3.56092976871523,3.56801810049398,3.64639359389732,2.51264699101243,2.25105044012672,1.98637722109853,10.3120004915784,6.26435395516053,8.01517617048792,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.56136794089522,0,0,0.452167921657868,0.940709657085638,0,0,0.433798070759735,0.884610551949874,0.808834249737046,0.220841518460394,0.484875253135222,0,1.17112318804619,1.04723353406728,0,0,0,0,2.54644086988199,2.28750301409313,2.89005009859588,0.521472960576829,0.255715457330331,1.66230435647648,1.1356888414743,0.81471491080253,0.497627882440372,0.252722758433675,0.210441855886474,2.99277018814219,0.919608417733892,2.16074555766419,3.46621081022145,2.65342346690179,3.20284300712124,3.27956035959051,2.58703370739016,3.01795190105979,3.02569728268511,2.99116911078713,1.97276159184817,1.39023624612799,1.74126083261083,0.411564272815887,1.39323986772945,0,0,0,1.44988040774851,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.617068451549513,0.697601834251224,0.804820204198858,1.40118410840603,0.16455984991348,0,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,2.05809224758569,0,0,1.06644125267617,1.39342003116263,1.28867461322093,0.605050573870028,2.66853652613844,0.760902504450237,0,0.329397909448022,0.754005626400808,0.994782360205754,0,0.898819408654221,0,0.199141273254367,0.758671603812327,0.456994050438915,0,0.610953983535943,0.775809948670503,0.771494018793504,0.252946148497029,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.488894929326078,0.848725428875941,0,1.17254380209271,0.238043640886014,0.975668239288994,0.945810864637146,1.55025282754142,1.75400245523236,0.327726629431476,0.345369963731791,0,0,0,0,0,2.56880943980467,2.22702204525186,0,0.504941854408746,1.26203287766503,0.780877488593277,1.93881057959519,1.91175038362042,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,0.790575555893047,2.57057053137446,0.851640511249612,0.712262414669021,0.81443479676788,0.989820737835213,0,0.485561272309963,0.604647113929502,0,0,0,1.03371317267288,0,0,0.632073515871632,0,0,1.02131881726136,2.34079422240703,1.55230420539305,1.28602221018955,1.59606210278046,0.178368817602071,0.493647061806363,0.608929898229199,0,0.42366414172764,0.882113592219848,0.16488625294148,0.968786560175433,0.422190474497091,0.358117032009409,0.492422699235184,0.874442509889552,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,3.47969592939249,0.609958401380546,0.648032044930808,1.04544148007234,0.655087691238533,0.404593039154462,0.909188012978695,0,0.259229946583586,0,0,7.62534384824292,5.46013018508422,5.44463327363333,4.90807329215378,3.71703476079712,2.58185925020659,1.3020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0,0,0,1.00314420807073,1.12950368523413,2.76195141904306,0.572895513439397,1.20297227640581,0,0,1.35004500046361,1.80128481289688,2.71885445390523,1.55328093525546,2.49089634202024,3.99024873401031,1.87806966329548,1.45864030240976,1.88651846365184,1.65459157605013,0,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,1.69763707247469,0.655490552289177,1.08842759088278,0.631790158511746,0.476293691283074,1.73826488917283,1.35036454324594,1.23625770240992,0.735994600671987,1.71434626192708,1.06485483695602,0.715308569841963,1.30811774969096,1.12931256498397,0.592302255241736,0.73171189149109,0.263069711437843,1.35804113845862,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.309873682371932,0.964533054905707,2.74791635731741,0,1.07435527024149,1.3390183244819,0.441182838239031,0.231867835620421|short_description=p4@Stox2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71069 | |||
|HGNC= | |||
|MCL_coexpression_id=3678 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q499E5 | |||
|association_with_transcript=52bp_to_ENSMUST00000079195,NM_001114311,uc009lqw.2,uc009lqx.2_5end | |||
|cluster_id=chr8:48374677..48374703,- | |||
|description=CAGE_peak_4_at_Stox2_5end | |||
|id=chr8:48374677..48374703,- | |||
|ontology_enrichment_celltype=CL:0000221!4.66e-15!44;CL:0000133!4.66e-15!44;CL:0002319!5.00e-15!43;CL:0000540!9.23e-15!33;CL:0000047!9.23e-15!33;CL:0000031!9.23e-15!33;CL:0000404!9.23e-15!33;CL:0000117!4.08e-14!23;CL:0000337!4.08e-14!23;CL:0000393!2.06e-12!39;CL:0000211!2.06e-12!39;CL:0000055!2.17e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-19,23;CL:0000337,1.57e-19,23;CL:0000540,1.39e-17,33;CL:0000047,1.39e-17,33;CL:0000031,1.39e-17,33;CL:0000404,1.39e-17,33;CL:0002319,5.07e-17,43;CL:0000221,2.38e-16,44;CL:0000133,2.38e-16,44;CL:0000393,3.13e-13,39;CL:0000211,3.13e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-22!73;UBERON:0005743!1.41e-22!73;UBERON:0000073!7.70e-22!75;UBERON:0001016!7.70e-22!75;UBERON:0004121!1.99e-20!102;UBERON:0000924!1.99e-20!102;UBERON:0006601!1.99e-20!102;UBERON:0002346!3.76e-17!71;UBERON:0003075!3.76e-17!71;UBERON:0007284!3.76e-17!71;UBERON:0000033!4.26e-16!63;UBERON:0001049!4.89e-15!52;UBERON:0005068!4.89e-15!52;UBERON:0006241!4.89e-15!52;UBERON:0007135!4.89e-15!52;UBERON:0003056!1.11e-13!49;UBERON:0000955!3.85e-13!50;UBERON:0006238!3.85e-13!50;UBERON:0002616!1.18e-12!49;UBERON:0002020!1.36e-11!34;UBERON:0003080!2.80e-10!40;UBERON:0002780!8.00e-10!39;UBERON:0001890!8.00e-10!39;UBERON:0006240!8.00e-10!39;UBERON:0002791!1.90e-08!29;UBERON:0003528!1.90e-08!29;UBERON:0001893!1.90e-08!29;UBERON:0000153!2.48e-08!94;UBERON:0000468!6.93e-08!333;UBERON:0007811!8.96e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.77e-26,73;UBERON:0001016,4.88e-25,75;UBERON:0004121,1.57e-23,95;UBERON:0000924,1.57e-23,95;UBERON:0006601,1.57e-23,95;UBERON:0002346,2.66e-23,64;UBERON:0003075,2.66e-23,64;UBERON:0007284,2.66e-23,64;UBERON:0000073,4.73e-20,54;UBERON:0010371,4.94e-19,73;UBERON:0001049,7.59e-19,52;UBERON:0005068,7.59e-19,52;UBERON:0006241,7.59e-19,52;UBERON:0007135,7.59e-19,52;UBERON:0003056,1.25e-15,49;UBERON:0002020,1.25e-14,34;UBERON:0010314,1.77e-14,92;UBERON:0000955,2.40e-14,47;UBERON:0006238,2.40e-14,47;UBERON:0002616,1.08e-13,46;UBERON:0003080,6.81e-12,40;UBERON:0002780,2.81e-11,39;UBERON:0001890,2.81e-11,39;UBERON:0006240,2.81e-11,39;UBERON:0003528,2.84e-10,29;UBERON:0002791,2.84e-10,29;UBERON:0001893,2.84e-10,29;UBERON:0003076,3.03e-08,12;UBERON:0003057,3.03e-08,12;UBERON:0002240,2.38e-07,6;UBERON:0005174,2.38e-07,6;UBERON:0001137,2.38e-07,6;UBERON:0002420,2.55e-07,8;UBERON:0007245,2.55e-07,8;UBERON:0010009,2.55e-07,8;UBERON:0010011,2.55e-07,8;UBERON:0000454,2.55e-07,8 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.367093504323363,0,2.39827672018491,0.659058548203415,1.36100929351998,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,4.85559506063035,5.28990979272033,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,1.79760066311043,4.2264013585371,2.28117147078651,2.16009501330705,2.52389953621658,4.85606673486466,3.97563373712904,1.83736198822431,2.1086003624012,2.75765635983006,3.30347642998166,1.78762273319263,2.30409799884365,3.56092976871523,3.56801810049398,3.64639359389732,2.51264699101243,2.25105044012672,1.98637722109853,10.3120004915784,6.26435395516053,8.01517617048792,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.56136794089522,0,0,0.452167921657868,0.940709657085638,0,0,0.433798070759735,0.884610551949874,0.808834249737046,0.220841518460394,0.484875253135222,0,1.17112318804619,1.04723353406728,0,0,0,0,2.54644086988199,2.28750301409313,2.89005009859588,0.521472960576829,0.255715457330331,1.66230435647648,1.1356888414743,0.81471491080253,0.497627882440372,0.252722758433675,0.210441855886474,2.99277018814219,0.919608417733892,2.16074555766419,3.46621081022145,2.65342346690179,3.20284300712124,3.27956035959051,2.58703370739016,3.01795190105979,3.02569728268511,2.99116911078713,1.97276159184817,1.39023624612799,1.74126083261083,0.411564272815887,1.39323986772945,0,0,0,1.44988040774851,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.617068451549513,0.697601834251224,0.804820204198858,1.40118410840603,0.16455984991348,0,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,2.05809224758569,0,0,1.06644125267617,1.39342003116263,1.28867461322093,0.605050573870028,2.66853652613844,0.760902504450237,0,0.329397909448022,0.754005626400808,0.994782360205754,0,0.898819408654221,0,0.199141273254367,0.758671603812327,0.456994050438915,0,0.610953983535943,0.775809948670503,0.771494018793504,0.252946148497029,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.488894929326078,0.848725428875941,0,1.17254380209271,0.238043640886014,0.975668239288994,0.945810864637146,1.55025282754142,1.75400245523236,0.327726629431476,0.345369963731791,0,0,0,0,0,2.56880943980467,2.22702204525186,0,0.504941854408746,1.26203287766503,0.780877488593277,1.93881057959519,1.91175038362042,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,0.790575555893047,2.57057053137446,0.851640511249612,0.712262414669021,0.81443479676788,0.989820737835213,0,0.485561272309963,0.604647113929502,0,0,0,1.03371317267288,0,0,0.632073515871632,0,0,1.02131881726136,2.34079422240703,1.55230420539305,1.28602221018955,1.59606210278046,0.178368817602071,0.493647061806363,0.608929898229199,0,0.42366414172764,0.882113592219848,0.16488625294148,0.968786560175433,0.422190474497091,0.358117032009409,0.492422699235184,0.874442509889552,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,3.47969592939249,0.609958401380546,0.648032044930808,1.04544148007234,0.655087691238533,0.404593039154462,0.909188012978695,0,0.259229946583586,0,0,7.62534384824292,5.46013018508422,5.44463327363333,4.90807329215378,3.71703476079712,2.58185925020659,1.3020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0,0,0,1.00314420807073,1.12950368523413,2.76195141904306,0.572895513439397,1.20297227640581,0,0,1.35004500046361,1.80128481289688,2.71885445390523,1.55328093525546,2.49089634202024,3.99024873401031,1.87806966329548,1.45864030240976,1.88651846365184,1.65459157605013,0,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,1.69763707247469,0.655490552289177,1.08842759088278,0.631790158511746,0.476293691283074,1.73826488917283,1.35036454324594,1.23625770240992,0.735994600671987,1.71434626192708,1.06485483695602,0.715308569841963,1.30811774969096,1.12931256498397,0.592302255241736,0.73171189149109,0.263069711437843,1.35804113845862,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.309873682371932,0.964533054905707,2.74791635731741,0,1.07435527024149,1.3390183244819,0.441182838239031,0.231867835620421 | |||
|short_description=p4@Stox2 | |||
}} |
Revision as of 21:24, 3 August 2015
Short description: | p4@Stox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Stox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3678 |
Association with transcript: | 52bp_to_ENSMUST00000079195, NM_001114311, uc009lqw.2, uc009lqx.2_5end |
EntrezGene: | 71069 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.57e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.57e-19 | 23 |
neuron | 1.39e-17 | 33 |
neuronal stem cell | 1.39e-17 | 33 |
neuroblast | 1.39e-17 | 33 |
electrically signaling cell | 1.39e-17 | 33 |
neural cell | 5.07e-17 | 43 |
ectodermal cell | 2.38e-16 | 44 |
neurectodermal cell | 2.38e-16 | 44 |
electrically responsive cell | 3.13e-13 | 39 |
electrically active cell | 3.13e-13 | 39 |