FFCP PHASE1:Mm9::chr8:73300549..73300615,-: Difference between revisions
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{{FFCP|EntrezGene=18709|HGNC=|UniProt=O08908|association_with_transcript=0bp_to_ENSMUST00000034296,ENSMUST00000142370,NM_008841,uc009mbn.2_5end|description=CAGE_peak_1_at_Pik3r2_5end|id=chr8:73300549..73300615,-|ontology_enrichment_celltype=CL:0000221!8.01e-14!44;CL:0000133!8.01e-14!44;CL:0002319!2.44e-13!43;CL:0000055!4.75e-13!50;CL:0000393!7.50e-12!39;CL:0000211!7.50e-12!39;CL:0000540!2.26e-11!33;CL:0000047!2.26e-11!33;CL:0000031!2.26e-11!33;CL:0000404!2.26e-11!33;CL:0002321!3.51e-11!70;CL:0000220!3.51e-11!70;CL:0000117!1.10e-07!23;CL:0000337!1.10e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,8.01e-14,44;CL:0000133,8.01e-14,44;CL:0002319,2.44e-13,43;CL:0000393,7.50e-12,39;CL:0000211,7.50e-12,39;CL:0000540,2.26e-11,33;CL:0000047,2.26e-11,33;CL:0000031,2.26e-11,33;CL:0000404,2.26e-11,33;CL:0002321,3.51e-11,70;CL:0000117,1.10e-07,23;CL:0000337,1.10e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.24e-23!73;UBERON:0005743!2.24e-23!73;UBERON:0000073!1.07e-21!75;UBERON:0001016!1.07e-21!75;UBERON:0004121!5.54e-18!102;UBERON:0000924!5.54e-18!102;UBERON:0006601!5.54e-18!102;UBERON:0002020!3.56e-16!34;UBERON:0001049!1.16e-15!52;UBERON:0005068!1.16e-15!52;UBERON:0006241!1.16e-15!52;UBERON:0007135!1.16e-15!52;UBERON:0002791!5.60e-14!29;UBERON:0003528!5.60e-14!29;UBERON:0001893!5.60e-14!29;UBERON:0000955!1.63e-13!50;UBERON:0006238!1.63e-13!50;UBERON:0002616!3.48e-13!49;UBERON:0002780!7.70e-13!39;UBERON:0001890!7.70e-13!39;UBERON:0006240!7.70e-13!39;UBERON:0000033!8.74e-13!63;UBERON:0003080!1.15e-12!40;UBERON:0000956!1.45e-12!21;UBERON:0001869!1.45e-12!21;UBERON:0000203!1.45e-12!21;UBERON:0002346!2.10e-12!71;UBERON:0003075!2.10e-12!71;UBERON:0007284!2.10e-12!71;UBERON:0003056!4.03e-11!49;UBERON:0002619!3.85e-10!17;UBERON:0002021!7.09e-07!10;UBERON:0000411!7.09e-07!10;UBERON:0001950!7.09e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.24e-23,73;UBERON:0001016,1.07e-21,75;UBERON:0004121,8.39e-21,95;UBERON:0000924,8.39e-21,95;UBERON:0006601,8.39e-21,95;UBERON:0010371,1.23e-16,73;UBERON:0002020,3.56e-16,34;UBERON:0001049,1.16e-15,52;UBERON:0005068,1.16e-15,52;UBERON:0006241,1.16e-15,52;UBERON:0007135,1.16e-15,52;UBERON:0000073,2.25e-15,54;UBERON:0002346,2.69e-15,64;UBERON:0003075,2.69e-15,64;UBERON:0007284,2.69e-15,64;UBERON:0000955,4.53e-14,47;UBERON:0006238,4.53e-14,47;UBERON:0003528,5.60e-14,29;UBERON:0002791,5.60e-14,29;UBERON:0001893,5.60e-14,29;UBERON:0002616,9.68e-14,46;UBERON:0002780,7.70e-13,39;UBERON:0001890,7.70e-13,39;UBERON:0006240,7.70e-13,39;UBERON:0003080,1.14e-12,40;UBERON:0000956,1.45e-12,21;UBERON:0001869,1.45e-12,21;UBERON:0000203,1.45e-12,21;UBERON:0003056,4.03e-11,49;UBERON:0002619,3.85e-10,17;UBERON:0010314,1.77e-08,92;UBERON:0002021,7.09e-07,10;UBERON:0000411,7.09e-07,10;UBERON:0001950,7.09e-07,10|phase1_expression=52.5288218503724,58.976843891052,57.3299041630815,87.4121570676739,91.6639185801815,28.2037176811975,26.6318410278899,7.74739940649458,0.563154888606667,0.468129052643987,0.513653904676515,0.717949430958028,8.04643430676667,7.16847299835779,19.3203661853084,16.4004966585759,15.3903613188192,10.4102514568218,8.36398044995006,9.76096199135469,27.2138528483423,28.4965029946541,22.7243816550874,32.638454249855,30.0526158197993,37.3250776674763,27.9995297503399,28.2267314818515,47.3158314446371,39.5687303723091,18.4036323843903,17.14582818341,16.6067492647834,15.8481681015439,17.908800424579,15.9585259544153,15.3127017196777,5.85944283031671,8.5946887897618,5.23523743973798,7.05877785637217,6.14740936462601,10.6812277666854,37.1395613027953,40.9562802126839,34.6903361585578,91.5397872887206,41.8608300250457,45.0356674605667,41.2191386037481,45.2156141849921,44.5632949531412,7.71799987865587,3.62681071005672,1.68046899571232,28.2985379639542,30.659078073447,28.8776371675368,47.5443683020055,42.3192783417626,57.0448263155561,60.3143267083055,35.5717918444456,49.4944844504769,46.4767190406478,48.3126478163348,60.8188224352362,81.8384990334911,62.4211466097035,70.2030879324791,65.6213879416312,47.1324124266276,50.7997644188711,48.5063564891218,54.727763951413,56.0723459832113,18.7196997698961,31.6664598451266,30.5677001179925,42.3354983613922,48.5799387528795,45.8403766089949,31.547678887156,27.5753678915523,25.6701056265041,45.3728021629448,41.0030440701416,55.5470348559396,7.72407171998477,21.0844652697932,15.9425468785923,12.9063581547208,6.11974200336975,17.810205324048,14.9448576012964,11.2006721774334,18.5386634573912,42.9484412896706,38.1885426766217,37.8073344726064,49.8585706009449,39.7812079984385,94.2779386914589,85.3280043783997,23.8140145112336,21.2822286999083,23.25412447068,19.068707913083,10.8753911131812,22.860089415983,24.6349164007913,20.3991870469135,18.2186242832286,15.3737093363675,22.5770317700553,27.6466500925286,25.7082766443749,11.5679485535929,19.4614321428972,29.1180329905337,22.3049933644997,18.9101348722737,27.9587641827183,40.9893115816166,54.2466970646849,35.5085306739942,6.47001672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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18709 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08908 | |||
|association_with_transcript=0bp_to_ENSMUST00000034296,ENSMUST00000142370,NM_008841,uc009mbn.2_5end | |||
|cluster_id=chr8:73300549..73300615,- | |||
|description=CAGE_peak_1_at_Pik3r2_5end | |||
|id=chr8:73300549..73300615,- | |||
|ontology_enrichment_celltype=CL:0000221!8.01e-14!44;CL:0000133!8.01e-14!44;CL:0002319!2.44e-13!43;CL:0000055!4.75e-13!50;CL:0000393!7.50e-12!39;CL:0000211!7.50e-12!39;CL:0000540!2.26e-11!33;CL:0000047!2.26e-11!33;CL:0000031!2.26e-11!33;CL:0000404!2.26e-11!33;CL:0002321!3.51e-11!70;CL:0000220!3.51e-11!70;CL:0000117!1.10e-07!23;CL:0000337!1.10e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.01e-14,44;CL:0000133,8.01e-14,44;CL:0002319,2.44e-13,43;CL:0000393,7.50e-12,39;CL:0000211,7.50e-12,39;CL:0000540,2.26e-11,33;CL:0000047,2.26e-11,33;CL:0000031,2.26e-11,33;CL:0000404,2.26e-11,33;CL:0002321,3.51e-11,70;CL:0000117,1.10e-07,23;CL:0000337,1.10e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.24e-23!73;UBERON:0005743!2.24e-23!73;UBERON:0000073!1.07e-21!75;UBERON:0001016!1.07e-21!75;UBERON:0004121!5.54e-18!102;UBERON:0000924!5.54e-18!102;UBERON:0006601!5.54e-18!102;UBERON:0002020!3.56e-16!34;UBERON:0001049!1.16e-15!52;UBERON:0005068!1.16e-15!52;UBERON:0006241!1.16e-15!52;UBERON:0007135!1.16e-15!52;UBERON:0002791!5.60e-14!29;UBERON:0003528!5.60e-14!29;UBERON:0001893!5.60e-14!29;UBERON:0000955!1.63e-13!50;UBERON:0006238!1.63e-13!50;UBERON:0002616!3.48e-13!49;UBERON:0002780!7.70e-13!39;UBERON:0001890!7.70e-13!39;UBERON:0006240!7.70e-13!39;UBERON:0000033!8.74e-13!63;UBERON:0003080!1.15e-12!40;UBERON:0000956!1.45e-12!21;UBERON:0001869!1.45e-12!21;UBERON:0000203!1.45e-12!21;UBERON:0002346!2.10e-12!71;UBERON:0003075!2.10e-12!71;UBERON:0007284!2.10e-12!71;UBERON:0003056!4.03e-11!49;UBERON:0002619!3.85e-10!17;UBERON:0002021!7.09e-07!10;UBERON:0000411!7.09e-07!10;UBERON:0001950!7.09e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.24e-23,73;UBERON:0001016,1.07e-21,75;UBERON:0004121,8.39e-21,95;UBERON:0000924,8.39e-21,95;UBERON:0006601,8.39e-21,95;UBERON:0010371,1.23e-16,73;UBERON:0002020,3.56e-16,34;UBERON:0001049,1.16e-15,52;UBERON:0005068,1.16e-15,52;UBERON:0006241,1.16e-15,52;UBERON:0007135,1.16e-15,52;UBERON:0000073,2.25e-15,54;UBERON:0002346,2.69e-15,64;UBERON:0003075,2.69e-15,64;UBERON:0007284,2.69e-15,64;UBERON:0000955,4.53e-14,47;UBERON:0006238,4.53e-14,47;UBERON:0003528,5.60e-14,29;UBERON:0002791,5.60e-14,29;UBERON:0001893,5.60e-14,29;UBERON:0002616,9.68e-14,46;UBERON:0002780,7.70e-13,39;UBERON:0001890,7.70e-13,39;UBERON:0006240,7.70e-13,39;UBERON:0003080,1.14e-12,40;UBERON:0000956,1.45e-12,21;UBERON:0001869,1.45e-12,21;UBERON:0000203,1.45e-12,21;UBERON:0003056,4.03e-11,49;UBERON:0002619,3.85e-10,17;UBERON:0010314,1.77e-08,92;UBERON:0002021,7.09e-07,10;UBERON:0000411,7.09e-07,10;UBERON:0001950,7.09e-07,10 | |||
|phase1_expression=52.5288218503724,58.976843891052,57.3299041630815,87.4121570676739,91.6639185801815,28.2037176811975,26.6318410278899,7.74739940649458,0.563154888606667,0.468129052643987,0.513653904676515,0.717949430958028,8.04643430676667,7.16847299835779,19.3203661853084,16.4004966585759,15.3903613188192,10.4102514568218,8.36398044995006,9.76096199135469,27.2138528483423,28.4965029946541,22.7243816550874,32.638454249855,30.0526158197993,37.3250776674763,27.9995297503399,28.2267314818515,47.3158314446371,39.5687303723091,18.4036323843903,17.14582818341,16.6067492647834,15.8481681015439,17.908800424579,15.9585259544153,15.3127017196777,5.85944283031671,8.5946887897618,5.23523743973798,7.05877785637217,6.14740936462601,10.6812277666854,37.1395613027953,40.9562802126839,34.6903361585578,91.5397872887206,41.8608300250457,45.0356674605667,41.2191386037481,45.2156141849921,44.5632949531412,7.71799987865587,3.62681071005672,1.68046899571232,28.2985379639542,30.659078073447,28.8776371675368,47.5443683020055,42.3192783417626,57.0448263155561,60.3143267083055,35.5717918444456,49.4944844504769,46.4767190406478,48.3126478163348,60.8188224352362,81.8384990334911,62.4211466097035,70.2030879324791,65.6213879416312,47.1324124266276,50.7997644188711,48.5063564891218,54.727763951413,56.0723459832113,18.7196997698961,31.6664598451266,30.5677001179925,42.3354983613922,48.5799387528795,45.8403766089949,31.547678887156,27.5753678915523,25.6701056265041,45.3728021629448,41.0030440701416,55.5470348559396,7.72407171998477,21.0844652697932,15.9425468785923,12.9063581547208,6.11974200336975,17.810205324048,14.9448576012964,11.2006721774334,18.5386634573912,42.9484412896706,38.1885426766217,37.8073344726064,49.8585706009449,39.7812079984385,94.2779386914589,85.3280043783997,23.8140145112336,21.2822286999083,23.25412447068,19.068707913083,10.8753911131812,22.860089415983,24.6349164007913,20.3991870469135,18.2186242832286,15.3737093363675,22.5770317700553,27.6466500925286,25.7082766443749,11.5679485535929,19.4614321428972,29.1180329905337,22.3049933644997,18.9101348722737,27.9587641827183,40.9893115816166,54.2466970646849,35.5085306739942,6.4700167233197,7.19883277192089,7.87835407853001,28.0108495687018,51.2400675156862,86.5758486057636,50.4090528557602,62.9060025032613,34.9083914860061,40.2358332408039,32.7922751598018,27.8671614166608,30.8321765289083,28.6200924005605,24.4626432769883,19.5416788768452,29.1700650284666,26.0719334855787,28.2351471478011,26.0070852178245,33.8263225660621,29.4921842642478,35.7842868268518,28.5550181053407,34.31046921197,41.2087976963841,30.3071501655902,41.0937556496157,32.719359688863,27.6657630877706,13.3420505589515,6.69104558498259,6.53576048609863,16.7771875753757,17.5894544985822,19.2666405763286,19.6498130535725,17.5120166255189,22.9857998202194,14.4171045745253,24.681152928765,21.7183536802935,26.0004562863299,20.685100473966,24.8881245305777,21.7837981263745,16.4662586468288,23.4861232830651,54.6753866266731,75.7377947111533,54.8495179753105,30.147364599644,21.9686898051291,21.1335371392999,25.2580224191303,30.6558957427481,26.9077433052293,31.3872283085723,45.5547899082731,42.6570292735188,34.9355940232375,42.9745979608886,42.3072069048491,37.7504151634773,36.5273304288233,46.3999166682676,23.5188197181821,24.5634302110917,28.1769339182701,21.7906920794486,23.6622034344503,27.2126981174436,24.5990129413361,18.4512684974503,15.071877872772,25.5432129318127,17.7871576252289,12.346537822991,12.9728936774714,16.1900720917095,13.3887680116412,17.6059326619264,10.6942857748196,9.78166867332756,11.0251954207024,10.4333337011471,14.3768206527355,17.8627654880882,18.7222603868736,21.7217835034516,17.0427542845817,18.8152973331713,16.6277871149944,18.380666941737,20.6965520081373,21.3878808076737,27.9281395463317,20.4357634079015,24.5184950112594,23.2209040950781,19.5467578691677,21.7035395855799,28.5424035896902,22.9408640602033,20.3768278601757,24.1563927831124,28.6503439484617,25.5635671394793,12.2941068254759,22.9027499432928,26.4908473479857,23.9111840648094,24.5902418065013,26.5094473564592,53.0053808619311,32.406415776621,49.7628048762766,41.5805708437441,44.114137468314,45.575321457002,47.3628520959626,48.2222165553665,40.3193533505454,41.4504498184131,23.7039942297809,42.7357448801413,33.8804875455438,35.1386361931501,21.2392221343941,23.3069410708782,26.3021494559333,20.369348613637,25.6912646806272,20.9055900601871,19.6405502807848,25.4473610634254,31.7282666762402,17.6980584444057,28.4630243152497,23.721174947083,24.8520912200265,22.6876978479451,29.493779902468,27.4351404840438,25.1823131772028,31.5712807155665,30.2770197907903,42.9295578251585,14.54964589995,15.2519091021951,24.9197089802107,41.8811082471359,41.1734288074559,40.0477821522955,40.228479929057,37.9165478411091,49.8432230637045,25.7741169794608,19.4792804109552,28.6877746468879,16.4823129359043,20.3437933565066,20.9142168413169,21.2763701082066,6.62915876976036,4.61839792668071,7.32459861163446,29.5947891584685,29.102911409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| |||
|short_description=p1@Pik3r2 | |||
}} |
Revision as of 01:30, 4 August 2015
Short description: | p1@Pik3r2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pik3r2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000034296, ENSMUST00000142370, NM_008841, uc009mbn.2_5end |
EntrezGene: | 18709 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.01e-14 | 44 |
neurectodermal cell | 8.01e-14 | 44 |
neural cell | 2.44e-13 | 43 |
electrically responsive cell | 7.50e-12 | 39 |
electrically active cell | 7.50e-12 | 39 |
neuron | 2.26e-11 | 33 |
neuronal stem cell | 2.26e-11 | 33 |
neuroblast | 2.26e-11 | 33 |
electrically signaling cell | 2.26e-11 | 33 |
embryonic cell | 3.51e-11 | 70 |
CNS neuron (sensu Vertebrata) | 1.10e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.24e-23 | 73 |
nervous system | 1.07e-21 | 75 |
ectoderm-derived structure | 8.39e-21 | 95 |
ectoderm | 8.39e-21 | 95 |
presumptive ectoderm | 8.39e-21 | 95 |
ecto-epithelium | 1.23e-16 | 73 |
gray matter | 3.56e-16 | 34 |
neural tube | 1.16e-15 | 52 |
neural rod | 1.16e-15 | 52 |
future spinal cord | 1.16e-15 | 52 |
neural keel | 1.16e-15 | 52 |
regional part of nervous system | 2.25e-15 | 54 |
neurectoderm | 2.69e-15 | 64 |
neural plate | 2.69e-15 | 64 |
presumptive neural plate | 2.69e-15 | 64 |
brain | 4.53e-14 | 47 |
future brain | 4.53e-14 | 47 |
brain grey matter | 5.60e-14 | 29 |
regional part of telencephalon | 5.60e-14 | 29 |
telencephalon | 5.60e-14 | 29 |
regional part of brain | 9.68e-14 | 46 |
regional part of forebrain | 7.70e-13 | 39 |
forebrain | 7.70e-13 | 39 |
future forebrain | 7.70e-13 | 39 |
anterior neural tube | 1.14e-12 | 40 |
cerebral cortex | 1.45e-12 | 21 |
cerebral hemisphere | 1.45e-12 | 21 |
pallium | 1.45e-12 | 21 |
pre-chordal neural plate | 4.03e-11 | 49 |
regional part of cerebral cortex | 3.85e-10 | 17 |
structure with developmental contribution from neural crest | 1.77e-08 | 92 |
occipital lobe | 7.09e-07 | 10 |
visual cortex | 7.09e-07 | 10 |
neocortex | 7.09e-07 | 10 |