FFCP PHASE1:Mm9::chr9:121669118..121669179,+: Difference between revisions
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{{FFCP|EntrezGene=270210|HGNC=|MCL_coexpression_id=3110|UniProt=E9PZ11|association_with_transcript=0bp_to_ENSMUST00000093772,NM_001166644,uc012hcs.1_5end|description=CAGE_peak_1_at_Zfp651_5end|id=chr9:121669118..121669179,+|ontology_enrichment_celltype=CL:0000221!8.91e-10!44;CL:0000133!8.91e-10!44;CL:0002319!2.22e-09!43;CL:0000055!6.14e-08!50;CL:0000117!4.84e-07!23;CL:0000337!4.84e-07!23;CL:0000540!1.00e-06!33;CL:0000047!1.00e-06!33;CL:0000031!1.00e-06!33;CL:0000404!1.00e-06!33|ontology_enrichment_celltype_v019_2=CL:0000221,8.09e-10,44;CL:0000133,8.09e-10,44;CL:0002319,2.02e-09,43;CL:0000117,4.53e-07,23;CL:0000337,4.53e-07,23;CL:0000540,9.40e-07,33;CL:0000047,9.40e-07,33;CL:0000031,9.40e-07,33;CL:0000404,9.40e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-22!73;UBERON:0005743!1.10e-22!73;UBERON:0000073!4.05e-22!75;UBERON:0001016!4.05e-22!75;UBERON:0004121!4.47e-21!102;UBERON:0000924!4.47e-21!102;UBERON:0006601!4.47e-21!102;UBERON:0001049!2.18e-18!52;UBERON:0005068!2.18e-18!52;UBERON:0006241!2.18e-18!52;UBERON:0007135!2.18e-18!52;UBERON:0000033!5.70e-18!63;UBERON:0000955!1.87e-17!50;UBERON:0006238!1.87e-17!50;UBERON:0002346!2.18e-17!71;UBERON:0003075!2.18e-17!71;UBERON:0007284!2.18e-17!71;UBERON:0002616!8.63e-17!49;UBERON:0002020!7.23e-13!34;UBERON:0004111!9.46e-13!122;UBERON:0003080!9.58e-13!40;UBERON:0003056!1.41e-12!49;UBERON:0002780!2.56e-12!39;UBERON:0001890!2.56e-12!39;UBERON:0006240!2.56e-12!39;UBERON:0000025!3.30e-12!114;UBERON:0000468!2.05e-11!333;UBERON:0002791!2.73e-10!29;UBERON:0003528!2.73e-10!29;UBERON:0001893!2.73e-10!29;UBERON:0000956!4.92e-08!21;UBERON:0001869!4.92e-08!21;UBERON:0000203!4.92e-08!21;UBERON:0002619!2.10e-07!17;UBERON:0000922!2.80e-07!328;UBERON:0007811!9.19e-07!86;UBERON:0000479!1.00e-06!349|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.71e-24,92;UBERON:0001017,8.59e-23,73;UBERON:0001016,3.18e-22,75;UBERON:0004121,1.67e-21,95;UBERON:0000924,1.67e-21,95;UBERON:0006601,1.67e-21,95;UBERON:0000073,1.13e-19,54;UBERON:0001049,1.79e-18,52;UBERON:0005068,1.79e-18,52;UBERON:0006241,1.79e-18,52;UBERON:0007135,1.79e-18,52;UBERON:0002346,3.62e-18,64;UBERON:0003075,3.62e-18,64;UBERON:0007284,3.62e-18,64;UBERON:0010371,2.29e-17,73;UBERON:0000955,5.39e-16,47;UBERON:0006238,5.39e-16,47;UBERON:0002616,2.43e-15,46;UBERON:0002020,6.33e-13,34;UBERON:0003080,8.40e-13,40;UBERON:0003056,1.24e-12,49;UBERON:0004111,1.91e-12,122;UBERON:0002780,2.26e-12,39;UBERON:0001890,2.26e-12,39;UBERON:0006240,2.26e-12,39;UBERON:0000025,6.68e-12,114;UBERON:0003528,2.46e-10,29;UBERON:0002791,2.46e-10,29;UBERON:0001893,2.46e-10,29;UBERON:0000956,4.56e-08,21;UBERON:0001869,4.56e-08,21;UBERON:0000203,4.56e-08,21;UBERON:0002619,1.96e-07,17|phase1_expression=12.1713123799643,0.348975407639361,0,0,0,0,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,10.2902381082794,0,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.831173226792462,0.408338712524738,0,0,0,0,0,0,9.31636453019272,7.40051597902456,7.52541683862894,18.7773922643529,24.41881751461,22.4079906389161,29.1644848611425,11.3389001516544,15.8127820801469,0,0,0,4.11615097657515,8.30946975822394,15.4701627683233,18.0061650165042,11.1088105647127,22.1840991227163,4.74382344896785,4.4464739805557,4.94944844504769,1.97773272513395,1.4209602298922,25.4660093940644,27.2794996778304,12.1316846400919,12.8255641415106,12.1988477583802,36.2776750192831,25.6207507503872,9.43179153955146,8.05101956553185,11.9498442259303,20.9220173898839,23.8775322219301,21.5049146558741,12.924856197559,12.1678565991205,11.9810075228055,21.4970909231063,30.3891809417107,17.4190002465564,20.3293723976831,24.2031857358475,19.199142920006,9.84440513331393,6.95258352982427,8.11620568364698,0.860423876981386,0,0,0.649776417447669,0.448026887097336,15.1679973742292,4.77204903218562,3.11743205523443,3.5333957451034,20.1406090280653,10.2661181931454,5.09610479413291,7.11066703153331,2.81438353314578,3.04031838570118,2.02209778005913,4.33898742932428,0.258937883647172,10.6878340126674,7.98032503124225,10.3518262626128,7.14908041493781,7.83757730873637,12.8171690777918,12.3153259503082,4.6967043869531,8.96516012903452,7.96149496754887,21.0296904931632,13.6921741445444,13.091631834651,7.45567044872489,14.9318206475889,18.2218634927706,2.29911349687732,0,0,0.127070227073065,19.3229924832221,18.7575247155637,18.2198810563653,23.9877561865342,27.6172693916757,18.2853479212413,23.8494656709604,28.4131825142382,10.8234064430781,3.28539585963777,7.78634866779954,7.67710613479952,9.19608417733892,7.02242306240862,9.94651797715719,15.7164313039567,13.0675994690547,16.1166966242734,19.1440494346872,4.52692785158969,7.56424320671277,10.9089696981648,12.9325482132269,11.9560317167007,13.2335823278423,10.4948889568051,9.95171334092466,0,0,0,8.07790512888457,11.4917769390737,10.0834754418168,7.57583153872673,11.215561209602,15.5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:270210 | |||
|HGNC= | |||
|MCL_coexpression_id=3110 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PZ11 | |||
|association_with_transcript=0bp_to_ENSMUST00000093772,NM_001166644,uc012hcs.1_5end | |||
|cluster_id=chr9:121669118..121669179,+ | |||
|description=CAGE_peak_1_at_Zfp651_5end | |||
|id=chr9:121669118..121669179,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.91e-10!44;CL:0000133!8.91e-10!44;CL:0002319!2.22e-09!43;CL:0000055!6.14e-08!50;CL:0000117!4.84e-07!23;CL:0000337!4.84e-07!23;CL:0000540!1.00e-06!33;CL:0000047!1.00e-06!33;CL:0000031!1.00e-06!33;CL:0000404!1.00e-06!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.09e-10,44;CL:0000133,8.09e-10,44;CL:0002319,2.02e-09,43;CL:0000117,4.53e-07,23;CL:0000337,4.53e-07,23;CL:0000540,9.40e-07,33;CL:0000047,9.40e-07,33;CL:0000031,9.40e-07,33;CL:0000404,9.40e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-22!73;UBERON:0005743!1.10e-22!73;UBERON:0000073!4.05e-22!75;UBERON:0001016!4.05e-22!75;UBERON:0004121!4.47e-21!102;UBERON:0000924!4.47e-21!102;UBERON:0006601!4.47e-21!102;UBERON:0001049!2.18e-18!52;UBERON:0005068!2.18e-18!52;UBERON:0006241!2.18e-18!52;UBERON:0007135!2.18e-18!52;UBERON:0000033!5.70e-18!63;UBERON:0000955!1.87e-17!50;UBERON:0006238!1.87e-17!50;UBERON:0002346!2.18e-17!71;UBERON:0003075!2.18e-17!71;UBERON:0007284!2.18e-17!71;UBERON:0002616!8.63e-17!49;UBERON:0002020!7.23e-13!34;UBERON:0004111!9.46e-13!122;UBERON:0003080!9.58e-13!40;UBERON:0003056!1.41e-12!49;UBERON:0002780!2.56e-12!39;UBERON:0001890!2.56e-12!39;UBERON:0006240!2.56e-12!39;UBERON:0000025!3.30e-12!114;UBERON:0000468!2.05e-11!333;UBERON:0002791!2.73e-10!29;UBERON:0003528!2.73e-10!29;UBERON:0001893!2.73e-10!29;UBERON:0000956!4.92e-08!21;UBERON:0001869!4.92e-08!21;UBERON:0000203!4.92e-08!21;UBERON:0002619!2.10e-07!17;UBERON:0000922!2.80e-07!328;UBERON:0007811!9.19e-07!86;UBERON:0000479!1.00e-06!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.71e-24,92;UBERON:0001017,8.59e-23,73;UBERON:0001016,3.18e-22,75;UBERON:0004121,1.67e-21,95;UBERON:0000924,1.67e-21,95;UBERON:0006601,1.67e-21,95;UBERON:0000073,1.13e-19,54;UBERON:0001049,1.79e-18,52;UBERON:0005068,1.79e-18,52;UBERON:0006241,1.79e-18,52;UBERON:0007135,1.79e-18,52;UBERON:0002346,3.62e-18,64;UBERON:0003075,3.62e-18,64;UBERON:0007284,3.62e-18,64;UBERON:0010371,2.29e-17,73;UBERON:0000955,5.39e-16,47;UBERON:0006238,5.39e-16,47;UBERON:0002616,2.43e-15,46;UBERON:0002020,6.33e-13,34;UBERON:0003080,8.40e-13,40;UBERON:0003056,1.24e-12,49;UBERON:0004111,1.91e-12,122;UBERON:0002780,2.26e-12,39;UBERON:0001890,2.26e-12,39;UBERON:0006240,2.26e-12,39;UBERON:0000025,6.68e-12,114;UBERON:0003528,2.46e-10,29;UBERON:0002791,2.46e-10,29;UBERON:0001893,2.46e-10,29;UBERON:0000956,4.56e-08,21;UBERON:0001869,4.56e-08,21;UBERON:0000203,4.56e-08,21;UBERON:0002619,1.96e-07,17 | |||
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| |||
|short_description=p1@Zfp651 | |||
}} |
Revision as of 18:35, 4 August 2015
Short description: | p1@Zfp651 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp651_5end |
Coexpression cluster: | MCL_coexpression_mm9:3110 |
Association with transcript: | 0bp_to_ENSMUST00000093772, NM_001166644, uc012hcs.1_5end |
EntrezGene: | 270210 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.09e-10 | 44 |
neurectodermal cell | 8.09e-10 | 44 |
neural cell | 2.02e-09 | 43 |
CNS neuron (sensu Vertebrata) | 4.53e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.53e-07 | 23 |
neuron | 9.40e-07 | 33 |
neuronal stem cell | 9.40e-07 | 33 |
neuroblast | 9.40e-07 | 33 |
electrically signaling cell | 9.40e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.71e-24 | 92 |
central nervous system | 8.59e-23 | 73 |
nervous system | 3.18e-22 | 75 |
ectoderm-derived structure | 1.67e-21 | 95 |
ectoderm | 1.67e-21 | 95 |
presumptive ectoderm | 1.67e-21 | 95 |
regional part of nervous system | 1.13e-19 | 54 |
neural tube | 1.79e-18 | 52 |
neural rod | 1.79e-18 | 52 |
future spinal cord | 1.79e-18 | 52 |
neural keel | 1.79e-18 | 52 |
neurectoderm | 3.62e-18 | 64 |
neural plate | 3.62e-18 | 64 |
presumptive neural plate | 3.62e-18 | 64 |
ecto-epithelium | 2.29e-17 | 73 |
brain | 5.39e-16 | 47 |
future brain | 5.39e-16 | 47 |
regional part of brain | 2.43e-15 | 46 |
gray matter | 6.33e-13 | 34 |
anterior neural tube | 8.40e-13 | 40 |
pre-chordal neural plate | 1.24e-12 | 49 |
anatomical conduit | 1.91e-12 | 122 |
regional part of forebrain | 2.26e-12 | 39 |
forebrain | 2.26e-12 | 39 |
future forebrain | 2.26e-12 | 39 |
tube | 6.68e-12 | 114 |
brain grey matter | 2.46e-10 | 29 |
regional part of telencephalon | 2.46e-10 | 29 |
telencephalon | 2.46e-10 | 29 |
cerebral cortex | 4.56e-08 | 21 |
cerebral hemisphere | 4.56e-08 | 21 |
pallium | 4.56e-08 | 21 |
regional part of cerebral cortex | 1.96e-07 | 17 |