FFCP PHASE1:Mm9::chr9:58335890..58335917,+: Difference between revisions
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{{FFCP|EntrezGene=319477|HGNC=|MCL_coexpression_id=3616|UniProt=Q8CD60|association_with_transcript=-492bp_to_NM_176921,uc009pwz.1_5end|description=CAGE_peak_1_at_6030419C18Rik_5end|id=chr9:58335890..58335917,+|ontology_enrichment_celltype=CL:0000221!2.38e-14!44;CL:0000133!2.38e-14!44;CL:0002319!3.43e-14!43;CL:0000055!9.29e-13!50;CL:0000117!3.51e-12!23;CL:0000337!3.51e-12!23;CL:0000540!2.38e-11!33;CL:0000047!2.38e-11!33;CL:0000031!2.38e-11!33;CL:0000404!2.38e-11!33;CL:0000393!8.81e-11!39;CL:0000211!8.81e-11!39;CL:0002321!5.58e-07!70;CL:0000220!5.58e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,6.25e-15,44;CL:0000133,6.25e-15,44;CL:0002319,9.15e-15,43;CL:0000117,1.15e-12,23;CL:0000337,1.15e-12,23;CL:0000540,8.56e-12,33;CL:0000047,8.56e-12,33;CL:0000031,8.56e-12,33;CL:0000404,8.56e-12,33;CL:0000393,3.64e-11,39;CL:0000211,3.64e-11,39;CL:0002321,6.95e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.53e-30!75;UBERON:0001016!1.53e-30!75;UBERON:0001017!6.44e-30!73;UBERON:0005743!6.44e-30!73;UBERON:0004121!9.99e-27!102;UBERON:0000924!9.99e-27!102;UBERON:0006601!9.99e-27!102;UBERON:0001049!6.76e-24!52;UBERON:0005068!6.76e-24!52;UBERON:0006241!6.76e-24!52;UBERON:0007135!6.76e-24!52;UBERON:0002346!8.15e-24!71;UBERON:0003075!8.15e-24!71;UBERON:0007284!8.15e-24!71;UBERON:0000033!2.92e-23!63;UBERON:0000955!8.91e-23!50;UBERON:0006238!8.91e-23!50;UBERON:0002616!5.08e-22!49;UBERON:0003056!8.16e-19!49;UBERON:0002020!2.79e-18!34;UBERON:0003080!6.27e-18!40;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0002791!1.82e-15!29;UBERON:0003528!1.82e-15!29;UBERON:0001893!1.82e-15!29;UBERON:0000153!9.08e-14!94;UBERON:0007811!9.09e-13!86;UBERON:0000956!1.29e-11!21;UBERON:0001869!1.29e-11!21;UBERON:0000203!1.29e-11!21;UBERON:0002619!1.54e-09!17;UBERON:0002021!2.59e-07!10;UBERON:0000411!2.59e-07!10;UBERON:0001950!2.59e-07!10;UBERON:0000468!6.65e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.28e-32,75;UBERON:0001017,3.27e-31,73;UBERON:0004121,1.39e-28,95;UBERON:0000924,1.39e-28,95;UBERON:0006601,1.39e-28,95;UBERON:0002346,1.74e-26,64;UBERON:0003075,1.74e-26,64;UBERON:0007284,1.74e-26,64;UBERON:0000073,4.05e-26,54;UBERON:0001049,6.48e-25,52;UBERON:0005068,6.48e-25,52;UBERON:0006241,6.48e-25,52;UBERON:0007135,6.48e-25,52;UBERON:0010371,6.32e-24,73;UBERON:0000955,3.78e-22,47;UBERON:0006238,3.78e-22,47;UBERON:0002616,2.27e-21,46;UBERON:0003056,1.34e-19,49;UBERON:0002020,4.84e-19,34;UBERON:0010314,5.33e-19,92;UBERON:0003080,1.13e-18,40;UBERON:0002780,3.60e-18,39;UBERON:0001890,3.60e-18,39;UBERON:0006240,3.60e-18,39;UBERON:0003528,4.23e-16,29;UBERON:0002791,4.23e-16,29;UBERON:0001893,4.23e-16,29;UBERON:0000956,4.49e-12,21;UBERON:0001869,4.49e-12,21;UBERON:0000203,4.49e-12,21;UBERON:0002619,6.67e-10,17;UBERON:0002021,1.42e-07,10;UBERON:0000411,1.42e-07,10;UBERON:0001950,1.42e-07,10;UBERON:0003076,8.11e-07,12;UBERON:0003057,8.11e-07,12|phase1_expression=7.20669811971573,1.39590163055744,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0,0,0,0.171217968225505,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,5.3577272795174,0.496454756004426,0,1.27993938234725,0.68822784320151,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,4.78407908307194,6.38674666682942,4.22157529971868,3.9119567217402,7.84890562969608,4.83309602015838,2.72201858703997,5.5994568650145,5.75010257459886,0.167782606057736,0,0,3.08711323243136,0.286533439938757,1.03134418455488,13.3528864167335,18.5146842745212,17.747279298173,4.74382344896785,3.55717918444456,0.899899717281399,0.988866362566974,2.1314403448383,15.2796056364386,18.0582603501131,11.8206158031665,10.6654691282036,12.8298226424343,16.5677570954206,11.7060326704355,9.30930074033651,8.14686503655009,11.0306254393203,6.60695285996332,16.2162919368188,10.5988507946808,8.96826756565318,8.96578907303615,9.37644067002168,8.65467296904281,7.31591393041184,10.6958773443767,12.9636577608414,14.9490264839058,15.2847545576746,4.08921443999194,7.02815508993105,0.289864488701678,0,0,0,0,0,2.10666630197628,4.26075806445144,4.41636207824877,3.88673531961374,4.3661460130771,6.41632387071589,17.8363667794652,14.2213340630666,3.46385665617943,1.26679932737549,4.04419556011827,0.22836775943812,0,0.890652834388949,2.08182392119363,1.82679286987285,3.92046345335299,2.26083960828934,3.05730638552832,2.26199864393416,0.494389935468748,1.44599356919912,0.884610551949874,1.45590164952668,0.662524555381181,1.45462575940567,0,15.2246014446005,28.2753054198164,0.510914110417183,0,0,0,10.4853447583376,50.3250663100489,16.9633375352367,20.3374454624963,22.7586757023994,12.8828587626927,24.1739481970959,12.3225630258883,0.622034853050465,0.505445516867349,1.89397670297827,2.60240885925407,7.35686734187113,5.04173963454978,3.61691562805716,3.74200745332303,4.61209393025459,5.24729657534481,5.43277078551933,2.37124792226126,3.9712276835242,7.2139960907219,9.64461222681329,5.8389922337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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319477 | |||
|HGNC= | |||
|MCL_coexpression_id=3616 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CD60 | |||
|association_with_transcript=-492bp_to_NM_176921,uc009pwz.1_5end | |||
|cluster_id=chr9:58335890..58335917,+ | |||
|description=CAGE_peak_1_at_6030419C18Rik_5end | |||
|id=chr9:58335890..58335917,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.38e-14!44;CL:0000133!2.38e-14!44;CL:0002319!3.43e-14!43;CL:0000055!9.29e-13!50;CL:0000117!3.51e-12!23;CL:0000337!3.51e-12!23;CL:0000540!2.38e-11!33;CL:0000047!2.38e-11!33;CL:0000031!2.38e-11!33;CL:0000404!2.38e-11!33;CL:0000393!8.81e-11!39;CL:0000211!8.81e-11!39;CL:0002321!5.58e-07!70;CL:0000220!5.58e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.25e-15,44;CL:0000133,6.25e-15,44;CL:0002319,9.15e-15,43;CL:0000117,1.15e-12,23;CL:0000337,1.15e-12,23;CL:0000540,8.56e-12,33;CL:0000047,8.56e-12,33;CL:0000031,8.56e-12,33;CL:0000404,8.56e-12,33;CL:0000393,3.64e-11,39;CL:0000211,3.64e-11,39;CL:0002321,6.95e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.53e-30!75;UBERON:0001016!1.53e-30!75;UBERON:0001017!6.44e-30!73;UBERON:0005743!6.44e-30!73;UBERON:0004121!9.99e-27!102;UBERON:0000924!9.99e-27!102;UBERON:0006601!9.99e-27!102;UBERON:0001049!6.76e-24!52;UBERON:0005068!6.76e-24!52;UBERON:0006241!6.76e-24!52;UBERON:0007135!6.76e-24!52;UBERON:0002346!8.15e-24!71;UBERON:0003075!8.15e-24!71;UBERON:0007284!8.15e-24!71;UBERON:0000033!2.92e-23!63;UBERON:0000955!8.91e-23!50;UBERON:0006238!8.91e-23!50;UBERON:0002616!5.08e-22!49;UBERON:0003056!8.16e-19!49;UBERON:0002020!2.79e-18!34;UBERON:0003080!6.27e-18!40;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0002791!1.82e-15!29;UBERON:0003528!1.82e-15!29;UBERON:0001893!1.82e-15!29;UBERON:0000153!9.08e-14!94;UBERON:0007811!9.09e-13!86;UBERON:0000956!1.29e-11!21;UBERON:0001869!1.29e-11!21;UBERON:0000203!1.29e-11!21;UBERON:0002619!1.54e-09!17;UBERON:0002021!2.59e-07!10;UBERON:0000411!2.59e-07!10;UBERON:0001950!2.59e-07!10;UBERON:0000468!6.65e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.28e-32,75;UBERON:0001017,3.27e-31,73;UBERON:0004121,1.39e-28,95;UBERON:0000924,1.39e-28,95;UBERON:0006601,1.39e-28,95;UBERON:0002346,1.74e-26,64;UBERON:0003075,1.74e-26,64;UBERON:0007284,1.74e-26,64;UBERON:0000073,4.05e-26,54;UBERON:0001049,6.48e-25,52;UBERON:0005068,6.48e-25,52;UBERON:0006241,6.48e-25,52;UBERON:0007135,6.48e-25,52;UBERON:0010371,6.32e-24,73;UBERON:0000955,3.78e-22,47;UBERON:0006238,3.78e-22,47;UBERON:0002616,2.27e-21,46;UBERON:0003056,1.34e-19,49;UBERON:0002020,4.84e-19,34;UBERON:0010314,5.33e-19,92;UBERON:0003080,1.13e-18,40;UBERON:0002780,3.60e-18,39;UBERON:0001890,3.60e-18,39;UBERON:0006240,3.60e-18,39;UBERON:0003528,4.23e-16,29;UBERON:0002791,4.23e-16,29;UBERON:0001893,4.23e-16,29;UBERON:0000956,4.49e-12,21;UBERON:0001869,4.49e-12,21;UBERON:0000203,4.49e-12,21;UBERON:0002619,6.67e-10,17;UBERON:0002021,1.42e-07,10;UBERON:0000411,1.42e-07,10;UBERON:0001950,1.42e-07,10;UBERON:0003076,8.11e-07,12;UBERON:0003057,8.11e-07,12 | |||
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| |||
|short_description=p1@6030419C18Rik | |||
}} |
Revision as of 09:51, 5 August 2015
Short description: | p1@6030419C18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_6030419C18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3616 |
Association with transcript: | -492bp_to_NM_176921, uc009pwz.1_5end |
EntrezGene: | 319477 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.25e-15 | 44 |
neurectodermal cell | 6.25e-15 | 44 |
neural cell | 9.15e-15 | 43 |
CNS neuron (sensu Vertebrata) | 1.15e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-12 | 23 |
neuron | 8.56e-12 | 33 |
neuronal stem cell | 8.56e-12 | 33 |
neuroblast | 8.56e-12 | 33 |
electrically signaling cell | 8.56e-12 | 33 |
electrically responsive cell | 3.64e-11 | 39 |
electrically active cell | 3.64e-11 | 39 |
embryonic cell | 6.95e-08 | 70 |