Personal tools

FF:10195-103E6: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 69: Line 69:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.87721242984351e-278!GO:0005737;cytoplasm;3.82155144005102e-159!GO:0044444;cytoplasmic part;4.19724506942966e-104!GO:0043226;organelle;7.0821369822602e-98!GO:0043229;intracellular organelle;2.20955809229567e-97!GO:0043227;membrane-bound organelle;6.45617889611828e-90!GO:0043231;intracellular membrane-bound organelle;9.55345896050384e-90!GO:0044422;organelle part;2.71433653280176e-66!GO:0005515;protein binding;1.12739516183268e-65!GO:0044446;intracellular organelle part;2.68599672941223e-65!GO:0032991;macromolecular complex;4.81880252663933e-62!GO:0016043;cellular component organization and biogenesis;1.6788843743583e-46!GO:0005739;mitochondrion;3.70082819365732e-44!GO:0030529;ribonucleoprotein complex;1.77963317852503e-42!GO:0003723;RNA binding;7.93314263703024e-40!GO:0015031;protein transport;1.13300534410351e-37!GO:0033036;macromolecule localization;1.13300534410351e-37!GO:0031090;organelle membrane;3.74635245146461e-36!GO:0008104;protein localization;3.69967485106028e-34!GO:0043234;protein complex;3.71206666485278e-34!GO:0045184;establishment of protein localization;1.24735875119728e-33!GO:0044429;mitochondrial part;1.19612419576113e-32!GO:0043233;organelle lumen;4.65514759233269e-31!GO:0031974;membrane-enclosed lumen;4.65514759233269e-31!GO:0046907;intracellular transport;1.42576022398903e-30!GO:0044428;nuclear part;1.0538840015957e-28!GO:0051649;establishment of cellular localization;6.27632964974735e-28!GO:0051641;cellular localization;1.21208052394125e-27!GO:0031975;envelope;2.46718001717077e-26!GO:0031967;organelle envelope;3.40541243549509e-26!GO:0016192;vesicle-mediated transport;7.14461829375754e-26!GO:0005829;cytosol;2.29879270142643e-25!GO:0016071;mRNA metabolic process;4.03166610762823e-25!GO:0005840;ribosome;4.60473834736519e-24!GO:0006396;RNA processing;9.82378043485423e-24!GO:0008380;RNA splicing;4.58733510919984e-23!GO:0044238;primary metabolic process;8.18730268762322e-23!GO:0019538;protein metabolic process;2.09722343068512e-22!GO:0006119;oxidative phosphorylation;3.04220416726841e-22!GO:0005740;mitochondrial envelope;3.12904492358558e-22!GO:0031966;mitochondrial membrane;9.90491363834009e-22!GO:0006886;intracellular protein transport;1.69801747901656e-21!GO:0044237;cellular metabolic process;2.7262340310392e-21!GO:0006397;mRNA processing;6.75434542601404e-21!GO:0043170;macromolecule metabolic process;1.35027641327002e-20!GO:0006996;organelle organization and biogenesis;2.76356119252091e-20!GO:0019866;organelle inner membrane;2.90833974606009e-20!GO:0005634;nucleus;8.5272938074928e-20!GO:0005743;mitochondrial inner membrane;1.18770061159777e-19!GO:0005794;Golgi apparatus;1.28723319000583e-19!GO:0044260;cellular macromolecule metabolic process;3.3210493766215e-19!GO:0003735;structural constituent of ribosome;3.62947973798039e-19!GO:0031982;vesicle;1.07215403410562e-18!GO:0044267;cellular protein metabolic process;1.58979318943433e-18!GO:0031410;cytoplasmic vesicle;4.7370359389459e-18!GO:0006412;translation;5.6962104821019e-18!GO:0044455;mitochondrial membrane part;7.0546528917416e-18!GO:0031988;membrane-bound vesicle;1.17865119604888e-17!GO:0065003;macromolecular complex assembly;1.61157190668891e-17!GO:0031981;nuclear lumen;4.1872964134163e-17!GO:0016023;cytoplasmic membrane-bound vesicle;5.78118707301365e-17!GO:0033279;ribosomal subunit;1.43147101141853e-16!GO:0000166;nucleotide binding;1.80169576574361e-16!GO:0005746;mitochondrial respiratory chain;3.58738937336673e-16!GO:0005681;spliceosome;9.62881799407574e-16!GO:0022607;cellular component assembly;1.10770792574526e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.81893858777344e-15!GO:0003954;NADH dehydrogenase activity;6.81893858777344e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.81893858777344e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.2168780238412e-14!GO:0009058;biosynthetic process;1.55063745516342e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.55096012430623e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.90593183899016e-14!GO:0016462;pyrophosphatase activity;1.98657876024603e-14!GO:0017111;nucleoside-triphosphatase activity;1.61943849538513e-13!GO:0006512;ubiquitin cycle;2.62027263836819e-13!GO:0045045;secretory pathway;4.32686066679572e-13!GO:0048770;pigment granule;5.28517485629429e-13!GO:0042470;melanosome;5.28517485629429e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.79197079960781e-13!GO:0045271;respiratory chain complex I;5.79197079960781e-13!GO:0005747;mitochondrial respiratory chain complex I;5.79197079960781e-13!GO:0031980;mitochondrial lumen;5.93799024952594e-13!GO:0005759;mitochondrial matrix;5.93799024952594e-13!GO:0012505;endomembrane system;9.43562323607089e-13!GO:0044249;cellular biosynthetic process;9.8623366945125e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.35963573111101e-12!GO:0042773;ATP synthesis coupled electron transport;1.35963573111101e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.78913992645012e-12!GO:0009059;macromolecule biosynthetic process;2.09374580245627e-12!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.34427517303564e-12!GO:0044445;cytosolic part;2.56918072692158e-12!GO:0006457;protein folding;2.86215485884338e-12!GO:0032553;ribonucleotide binding;3.72835697380963e-12!GO:0032555;purine ribonucleotide binding;3.72835697380963e-12!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.31365088884657e-12!GO:0016874;ligase activity;1.07522366682837e-11!GO:0043283;biopolymer metabolic process;1.23172899208063e-11!GO:0043412;biopolymer modification;1.65171463761011e-11!GO:0043228;non-membrane-bound organelle;1.81628367168268e-11!GO:0043232;intracellular non-membrane-bound organelle;1.81628367168268e-11!GO:0007264;small GTPase mediated signal transduction;1.98992372028192e-11!GO:0048193;Golgi vesicle transport;2.09824729343207e-11!GO:0017076;purine nucleotide binding;2.53487914199437e-11!GO:0043687;post-translational protein modification;2.55576917455681e-11!GO:0008092;cytoskeletal protein binding;3.31344441313543e-11!GO:0006810;transport;5.02673783795151e-11!GO:0006464;protein modification process;7.58060195015332e-11!GO:0005654;nucleoplasm;8.15194238363822e-11!GO:0007399;nervous system development;9.22097885782029e-11!GO:0022618;protein-RNA complex assembly;1.033372723123e-10!GO:0019829;cation-transporting ATPase activity;1.06137448376035e-10!GO:0030135;coated vesicle;1.28994904093087e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.6829431182917e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.93532947484044e-10!GO:0044451;nucleoplasm part;5.28677870834229e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;5.69161749380391e-10!GO:0006511;ubiquitin-dependent protein catabolic process;8.23930270338762e-10!GO:0051082;unfolded protein binding;8.43903237430946e-10!GO:0003924;GTPase activity;8.98493512775772e-10!GO:0019941;modification-dependent protein catabolic process;9.38671226323687e-10!GO:0043632;modification-dependent macromolecule catabolic process;9.38671226323687e-10!GO:0006605;protein targeting;9.95402767122832e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.27044639557115e-09!GO:0044257;cellular protein catabolic process;1.4175630325745e-09!GO:0008135;translation factor activity, nucleic acid binding;1.57999662670016e-09!GO:0006793;phosphorus metabolic process;3.32207521815863e-09!GO:0006796;phosphate metabolic process;3.32207521815863e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.75750507694801e-09!GO:0015935;small ribosomal subunit;4.14875801956979e-09!GO:0030695;GTPase regulator activity;4.23708082552231e-09!GO:0008134;transcription factor binding;4.28379417833116e-09!GO:0005768;endosome;4.90098698835738e-09!GO:0007010;cytoskeleton organization and biogenesis;5.08231112556688e-09!GO:0044265;cellular macromolecule catabolic process;5.34931670861167e-09!GO:0008565;protein transporter activity;5.74270982372715e-09!GO:0010467;gene expression;5.74270982372715e-09!GO:0044431;Golgi apparatus part;5.95648145167242e-09!GO:0005083;small GTPase regulator activity;7.19377142658703e-09!GO:0015986;ATP synthesis coupled proton transport;7.63860374231598e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.63860374231598e-09!GO:0043005;neuron projection;9.15151250736417e-09!GO:0051179;localization;1.46708716826445e-08!GO:0005525;GTP binding;1.48775022911756e-08!GO:0051234;establishment of localization;2.00071061460524e-08!GO:0032940;secretion by cell;2.14224740083628e-08!GO:0005783;endoplasmic reticulum;2.35317881587271e-08!GO:0015934;large ribosomal subunit;2.38753704882116e-08!GO:0051186;cofactor metabolic process;4.28832627536621e-08!GO:0043285;biopolymer catabolic process;5.68839969969156e-08!GO:0006461;protein complex assembly;6.02000965605926e-08!GO:0008639;small protein conjugating enzyme activity;6.75490105233286e-08!GO:0016044;membrane organization and biogenesis;1.04093170977901e-07!GO:0030163;protein catabolic process;1.04093170977901e-07!GO:0016604;nuclear body;1.06987612057392e-07!GO:0004842;ubiquitin-protein ligase activity;1.13687292643101e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.35297990546027e-07!GO:0000375;RNA splicing, via transesterification reactions;1.35297990546027e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.35297990546027e-07!GO:0019717;synaptosome;1.42295293483914e-07!GO:0030136;clathrin-coated vesicle;1.44277374430831e-07!GO:0044248;cellular catabolic process;1.52654189260388e-07!GO:0015631;tubulin binding;1.69507194527788e-07!GO:0030036;actin cytoskeleton organization and biogenesis;2.01773489986658e-07!GO:0019787;small conjugating protein ligase activity;2.20658119359541e-07!GO:0006446;regulation of translational initiation;2.63287335402971e-07!GO:0016607;nuclear speck;2.67579398087233e-07!GO:0046034;ATP metabolic process;2.92503223200585e-07!GO:0032561;guanyl ribonucleotide binding;3.91906488398069e-07!GO:0019001;guanyl nucleotide binding;3.91906488398069e-07!GO:0009060;aerobic respiration;3.9205982112925e-07!GO:0006754;ATP biosynthetic process;4.13685820305533e-07!GO:0006753;nucleoside phosphate metabolic process;4.13685820305533e-07!GO:0005761;mitochondrial ribosome;4.6571404004068e-07!GO:0000313;organellar ribosome;4.6571404004068e-07!GO:0015630;microtubule cytoskeleton;4.80036907421342e-07!GO:0016469;proton-transporting two-sector ATPase complex;5.29398075905583e-07!GO:0032559;adenyl ribonucleotide binding;5.65635672081122e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.88715259804418e-07!GO:0009144;purine nucleoside triphosphate metabolic process;6.88715259804418e-07!GO:0009057;macromolecule catabolic process;6.9545808861219e-07!GO:0045333;cellular respiration;6.99658749467499e-07!GO:0006413;translational initiation;7.10571134126443e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.54941523417489e-07!GO:0003743;translation initiation factor activity;9.14561993010997e-07!GO:0000139;Golgi membrane;9.30470047948803e-07!GO:0048471;perinuclear region of cytoplasm;9.39906373701876e-07!GO:0008287;protein serine/threonine phosphatase complex;9.65407947724824e-07!GO:0009141;nucleoside triphosphate metabolic process;9.80729934099153e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.04304479302477e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.21337752019467e-06!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.26948388509396e-06!GO:0016310;phosphorylation;1.2920412335349e-06!GO:0006163;purine nucleotide metabolic process;1.34452897798714e-06!GO:0009150;purine ribonucleotide metabolic process;1.40626851469395e-06!GO:0030029;actin filament-based process;1.40626851469395e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.4605783646419e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.4605783646419e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.52512581979847e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.52533927857812e-06!GO:0006164;purine nucleotide biosynthetic process;1.5580353878957e-06!GO:0006913;nucleocytoplasmic transport;1.78316873204402e-06!GO:0005524;ATP binding;1.90085184077133e-06!GO:0009055;electron carrier activity;2.06070639535035e-06!GO:0048475;coated membrane;2.06867193912714e-06!GO:0030117;membrane coat;2.06867193912714e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.30119834694817e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.30119834694817e-06!GO:0016881;acid-amino acid ligase activity;2.46719908206744e-06!GO:0051169;nuclear transport;2.72284313858742e-06!GO:0044440;endosomal part;2.82939476937812e-06!GO:0010008;endosome membrane;2.82939476937812e-06!GO:0030554;adenyl nucleotide binding;2.85976473326272e-06!GO:0003779;actin binding;3.08308233283042e-06!GO:0019899;enzyme binding;3.63866914626715e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.6442129396996e-06!GO:0009259;ribonucleotide metabolic process;5.26933291684196e-06!GO:0006732;coenzyme metabolic process;5.52031280596701e-06!GO:0005730;nucleolus;5.65470381890174e-06!GO:0045259;proton-transporting ATP synthase complex;7.50966935292637e-06!GO:0005905;coated pit;7.84919144607928e-06!GO:0031965;nuclear membrane;8.16239853369773e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.19669532684833e-06!GO:0030425;dendrite;8.8050020234585e-06!GO:0009260;ribonucleotide biosynthetic process;9.28247899277998e-06!GO:0006099;tricarboxylic acid cycle;9.58407065123034e-06!GO:0046356;acetyl-CoA catabolic process;9.58407065123034e-06!GO:0007265;Ras protein signal transduction;1.17173179866052e-05!GO:0005770;late endosome;1.66103229844294e-05!GO:0042623;ATPase activity, coupled;1.66103229844294e-05!GO:0005874;microtubule;1.70521015157487e-05!GO:0009109;coenzyme catabolic process;1.9398464284732e-05!GO:0016887;ATPase activity;2.05540096470779e-05!GO:0005769;early endosome;2.35560165010881e-05!GO:0005635;nuclear envelope;2.36728491279239e-05!GO:0032446;protein modification by small protein conjugation;2.5619454212819e-05!GO:0008017;microtubule binding;2.64064656846062e-05!GO:0031252;leading edge;2.90071152128651e-05!GO:0022890;inorganic cation transmembrane transporter activity;3.07815449022143e-05!GO:0003712;transcription cofactor activity;3.96465779133319e-05!GO:0007242;intracellular signaling cascade;4.3320033049212e-05!GO:0006084;acetyl-CoA metabolic process;4.52880334417796e-05!GO:0016567;protein ubiquitination;4.83927175931857e-05!GO:0017038;protein import;5.14197493432429e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.27693696589279e-05!GO:0015399;primary active transmembrane transporter activity;5.27693696589279e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;5.2899011888445e-05!GO:0051128;regulation of cellular component organization and biogenesis;6.00749177810002e-05!GO:0044432;endoplasmic reticulum part;6.44866047149286e-05!GO:0005798;Golgi-associated vesicle;6.53810167807333e-05!GO:0030120;vesicle coat;6.87129336547603e-05!GO:0030662;coated vesicle membrane;6.87129336547603e-05!GO:0006897;endocytosis;6.88827397617669e-05!GO:0010324;membrane invagination;6.88827397617669e-05!GO:0051187;cofactor catabolic process;8.36147868470894e-05!GO:0051056;regulation of small GTPase mediated signal transduction;8.4267751432847e-05!GO:0008021;synaptic vesicle;9.63194337588254e-05!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000103848146050289!GO:0000245;spliceosome assembly;0.000103848146050289!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000104004192658598!GO:0048523;negative regulation of cellular process;0.000118127857710342!GO:0019226;transmission of nerve impulse;0.000153776016096144!GO:0000159;protein phosphatase type 2A complex;0.000154910538276481!GO:0043492;ATPase activity, coupled to movement of substances;0.000154910538276481!GO:0048489;synaptic vesicle transport;0.00017445071968227!GO:0008047;enzyme activator activity;0.000178950741489804!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00018463951734145!GO:0000902;cell morphogenesis;0.000193950586248132!GO:0032989;cellular structure morphogenesis;0.000193950586248132!GO:0007269;neurotransmitter secretion;0.000210241322808433!GO:0006323;DNA packaging;0.000217833043955333!GO:0016568;chromatin modification;0.000238125696890643!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000238403045234041!GO:0003729;mRNA binding;0.000282126282899545!GO:0005096;GTPase activator activity;0.00029683810325208!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000310360476809426!GO:0005793;ER-Golgi intermediate compartment;0.000320517767750469!GO:0006888;ER to Golgi vesicle-mediated transport;0.000332156536632882!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000354970848737126!GO:0030133;transport vesicle;0.000361726749093292!GO:0008601;protein phosphatase type 2A regulator activity;0.000365714732411272!GO:0045055;regulated secretory pathway;0.000380452369387375!GO:0006613;cotranslational protein targeting to membrane;0.000380452369387375!GO:0019208;phosphatase regulator activity;0.000385006785230937!GO:0030027;lamellipodium;0.000385473800550121!GO:0051188;cofactor biosynthetic process;0.000385473800550121!GO:0016564;transcription repressor activity;0.000399693846408717!GO:0051246;regulation of protein metabolic process;0.000419317966190745!GO:0005789;endoplasmic reticulum membrane;0.000431394391542646!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000449311706354788!GO:0030532;small nuclear ribonucleoprotein complex;0.000466046831970651!GO:0044453;nuclear membrane part;0.000487584105240772!GO:0000151;ubiquitin ligase complex;0.00048962964991456!GO:0016311;dephosphorylation;0.000514632831689669!GO:0009056;catabolic process;0.000517818405038305!GO:0004721;phosphoprotein phosphatase activity;0.000525672505054422!GO:0006752;group transfer coenzyme metabolic process;0.000554791934665114!GO:0019902;phosphatase binding;0.000626967951947623!GO:0006403;RNA localization;0.000636350607622392!GO:0030118;clathrin coat;0.000636657306470064!GO:0015980;energy derivation by oxidation of organic compounds;0.000714902251078717!GO:0005643;nuclear pore;0.000769303152107304!GO:0016197;endosome transport;0.000769377761433936!GO:0050657;nucleic acid transport;0.000778617822929441!GO:0051236;establishment of RNA localization;0.000778617822929441!GO:0050658;RNA transport;0.000778617822929441!GO:0005741;mitochondrial outer membrane;0.000803203049010113!GO:0008654;phospholipid biosynthetic process;0.000807608005493107!GO:0045786;negative regulation of progression through cell cycle;0.000859143608001862!GO:0006259;DNA metabolic process;0.00089657215450833!GO:0043566;structure-specific DNA binding;0.000926724211697609!GO:0007019;microtubule depolymerization;0.00102213685427216!GO:0016791;phosphoric monoester hydrolase activity;0.0010432413515625!GO:0031072;heat shock protein binding;0.00120410962609331!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00121095967961889!GO:0005773;vacuole;0.00125913807816937!GO:0005516;calmodulin binding;0.00129469739438483!GO:0019888;protein phosphatase regulator activity;0.00131278211121187!GO:0043623;cellular protein complex assembly;0.00132654688051853!GO:0048519;negative regulation of biological process;0.00146836022335838!GO:0031968;organelle outer membrane;0.00155325156002801!GO:0019867;outer membrane;0.00156577394369299!GO:0022406;membrane docking;0.00157592492196502!GO:0048278;vesicle docking;0.00157592492196502!GO:0006650;glycerophospholipid metabolic process;0.00157592492196502!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00157592492196502!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0015822450977593!GO:0006904;vesicle docking during exocytosis;0.00168869894201447!GO:0046578;regulation of Ras protein signal transduction;0.00173473301839257!GO:0006470;protein amino acid dephosphorylation;0.00173473301839257!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00180605690682838!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00180605690682838!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00180605690682838!GO:0006606;protein import into nucleus;0.00181031359447933!GO:0004722;protein serine/threonine phosphatase activity;0.00182793201737416!GO:0005875;microtubule associated complex;0.00188067341779359!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00189481804083978!GO:0004812;aminoacyl-tRNA ligase activity;0.00189481804083978!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00189481804083978!GO:0003697;single-stranded DNA binding;0.00201274078345339!GO:0016301;kinase activity;0.00206408359070231!GO:0005085;guanyl-nucleotide exchange factor activity;0.00212152953704191!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00214522186453624!GO:0004667;prostaglandin-D synthase activity;0.00214522186453624!GO:0050802;circadian sleep/wake cycle, sleep;0.00214522186453624!GO:0022410;circadian sleep/wake cycle process;0.00214522186453624!GO:0042749;regulation of circadian sleep/wake cycle;0.00214522186453624!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00216470034103488!GO:0005839;proteasome core complex (sensu Eukaryota);0.00219324020855951!GO:0001505;regulation of neurotransmitter levels;0.00222653848031773!GO:0051170;nuclear import;0.00234107702144249!GO:0003714;transcription corepressor activity;0.0023503615738648!GO:0009108;coenzyme biosynthetic process;0.00236053222494517!GO:0006892;post-Golgi vesicle-mediated transport;0.00237582705175168!GO:0003724;RNA helicase activity;0.00249854151684873!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00256051134723318!GO:0005938;cell cortex;0.00257202004341661!GO:0051087;chaperone binding;0.00262497207402311!GO:0008154;actin polymerization and/or depolymerization;0.00262497207402311!GO:0031901;early endosome membrane;0.00267365442587187!GO:0030426;growth cone;0.00274116258913372!GO:0046467;membrane lipid biosynthetic process;0.00274116258913372!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00286061979069693!GO:0016050;vesicle organization and biogenesis;0.00288249722664763!GO:0030427;site of polarized growth;0.00295425927957071!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00295439328954525!GO:0050767;regulation of neurogenesis;0.00303677829181511!GO:0048487;beta-tubulin binding;0.00303677829181511!GO:0005869;dynactin complex;0.00307078839597783!GO:0031114;regulation of microtubule depolymerization;0.00324402801462142!GO:0007026;negative regulation of microtubule depolymerization;0.00324402801462142!GO:0006607;NLS-bearing substrate import into nucleus;0.0034458327118707!GO:0007268;synaptic transmission;0.00344847411379189!GO:0005813;centrosome;0.0035078667445959!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00353473364691661!GO:0043038;amino acid activation;0.00355928328357222!GO:0006418;tRNA aminoacylation for protein translation;0.00355928328357222!GO:0043039;tRNA aminoacylation;0.00355928328357222!GO:0048167;regulation of synaptic plasticity;0.00382604130608006!GO:0043209;myelin sheath;0.0038519549831767!GO:0005048;signal sequence binding;0.00387820913017653!GO:0048699;generation of neurons;0.00388112909080438!GO:0006414;translational elongation;0.00399043732755901!GO:0008026;ATP-dependent helicase activity;0.00409956635754825!GO:0031902;late endosome membrane;0.00415960975511854!GO:0004674;protein serine/threonine kinase activity;0.00427856607009957!GO:0007017;microtubule-based process;0.00472976270634833!GO:0022008;neurogenesis;0.00492657016208008!GO:0007266;Rho protein signal transduction;0.00492752368930411!GO:0016070;RNA metabolic process;0.00499356720597166!GO:0019904;protein domain specific binding;0.00545103995425463!GO:0046488;phosphatidylinositol metabolic process;0.00548970733546871!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00552596248714372!GO:0055083;monovalent inorganic anion homeostasis;0.00552596248714372!GO:0055064;chloride ion homeostasis;0.00552596248714372!GO:0030644;cellular chloride ion homeostasis;0.00552596248714372!GO:0042254;ribosome biogenesis and assembly;0.00564195930593351!GO:0006891;intra-Golgi vesicle-mediated transport;0.00574470456682643!GO:0006612;protein targeting to membrane;0.00594340471402068!GO:0030054;cell junction;0.00608499318182953!GO:0030384;phosphoinositide metabolic process;0.00626596361357502!GO:0012506;vesicle membrane;0.00629205444575343!GO:0051261;protein depolymerization;0.0067458355422943!GO:0000314;organellar small ribosomal subunit;0.00683211323848507!GO:0005763;mitochondrial small ribosomal subunit;0.00683211323848507!GO:0051028;mRNA transport;0.0071142544647774!GO:0007272;ensheathment of neurons;0.00722592102160807!GO:0008366;axon ensheathment;0.00722592102160807!GO:0004298;threonine endopeptidase activity;0.00732913323255952!GO:0009966;regulation of signal transduction;0.00732913323255952!GO:0051920;peroxiredoxin activity;0.00737954693211897!GO:0050839;cell adhesion molecule binding;0.00738366518950966!GO:0043021;ribonucleoprotein binding;0.00738980142600374!GO:0019903;protein phosphatase binding;0.00759647433998583!GO:0006402;mRNA catabolic process;0.00793091538503488!GO:0030182;neuron differentiation;0.00798572083168645!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00802639333399846!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00802639333399846!GO:0006333;chromatin assembly or disassembly;0.00802639333399846!GO:0005815;microtubule organizing center;0.00808569108835887!GO:0030867;rough endoplasmic reticulum membrane;0.00810845626730941!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00823701770970007!GO:0019198;transmembrane receptor protein phosphatase activity;0.00823701770970007!GO:0001578;microtubule bundle formation;0.00828324997840303!GO:0009117;nucleotide metabolic process;0.00828895767769283!GO:0050803;regulation of synapse structure and activity;0.00833726072099423!GO:0030660;Golgi-associated vesicle membrane;0.00857920654420763!GO:0051276;chromosome organization and biogenesis;0.00877283195096783!GO:0016740;transferase activity;0.00880723720197042!GO:0006643;membrane lipid metabolic process;0.00884413314078706!GO:0050811;GABA receptor binding;0.00884413314078706!GO:0000323;lytic vacuole;0.00884445709231827!GO:0005764;lysosome;0.00884445709231827!GO:0051427;hormone receptor binding;0.00885429966128981!GO:0004386;helicase activity;0.0089494430939921!GO:0051168;nuclear export;0.00911889571349226!GO:0003746;translation elongation factor activity;0.00972302684949439!GO:0003713;transcription coactivator activity;0.00980612190297751!GO:0016126;sterol biosynthetic process;0.00998817925522449!GO:0008139;nuclear localization sequence binding;0.0100822821841999!GO:0044448;cell cortex part;0.0101507861909397!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0107940900488957!GO:0005774;vacuolar membrane;0.0110875557267769!GO:0048500;signal recognition particle;0.0112134931338276!GO:0042578;phosphoric ester hydrolase activity;0.0115226479387397!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0118310373322965!GO:0001508;regulation of action potential;0.012041458571067!GO:0032011;ARF protein signal transduction;0.0122580852137048!GO:0032012;regulation of ARF protein signal transduction;0.0122580852137048!GO:0030658;transport vesicle membrane;0.0123772826673674!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0123772826673674!GO:0030424;axon;0.0128534609688565!GO:0005099;Ras GTPase activator activity;0.012938553809505!GO:0030132;clathrin coat of coated pit;0.0129595056619042!GO:0044433;cytoplasmic vesicle part;0.0132227335055437!GO:0015629;actin cytoskeleton;0.0139807913631494!GO:0051540;metal cluster binding;0.014043905436865!GO:0051536;iron-sulfur cluster binding;0.014043905436865!GO:0030030;cell projection organization and biogenesis;0.014043905436865!GO:0048858;cell projection morphogenesis;0.014043905436865!GO:0032990;cell part morphogenesis;0.014043905436865!GO:0005791;rough endoplasmic reticulum;0.0140648386244457!GO:0043087;regulation of GTPase activity;0.0141806454641285!GO:0030742;GTP-dependent protein binding;0.0142109744932879!GO:0044456;synapse part;0.0145430943349591!GO:0035257;nuclear hormone receptor binding;0.0151120960128156!GO:0031109;microtubule polymerization or depolymerization;0.0161234981701282!GO:0005762;mitochondrial large ribosomal subunit;0.0163718039785758!GO:0000315;organellar large ribosomal subunit;0.0163718039785758!GO:0030041;actin filament polymerization;0.0165550719040651!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0169737092354266!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.017010729809106!GO:0000062;acyl-CoA binding;0.0171814760056284!GO:0009892;negative regulation of metabolic process;0.0171814760056284!GO:0030125;clathrin vesicle coat;0.0180060290034888!GO:0030665;clathrin coated vesicle membrane;0.0180060290034888!GO:0016363;nuclear matrix;0.0182256243050353!GO:0008250;oligosaccharyl transferase complex;0.0182256243050353!GO:0008186;RNA-dependent ATPase activity;0.0183069622171912!GO:0030258;lipid modification;0.0185630096486377!GO:0065002;intracellular protein transport across a membrane;0.0185630096486377!GO:0019887;protein kinase regulator activity;0.0194326176352222!GO:0006916;anti-apoptosis;0.0194326176352222!GO:0005092;GDP-dissociation inhibitor activity;0.0197280627341999!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0198090979516075!GO:0006695;cholesterol biosynthetic process;0.0198100628712892!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.02019434556398!GO:0043681;protein import into mitochondrion;0.0203008959387559!GO:0004683;calmodulin-dependent protein kinase activity;0.0204116344236589!GO:0008180;signalosome;0.0205479921837828!GO:0006887;exocytosis;0.020606004349513!GO:0005885;Arp2/3 protein complex;0.0206093901306166!GO:0008088;axon cargo transport;0.0210823783177479!GO:0046930;pore complex;0.0217056187244597!GO:0045296;cadherin binding;0.0218968098225573!GO:0005868;cytoplasmic dynein complex;0.0218968098225573!GO:0008361;regulation of cell size;0.0218968098225573!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0220413782317018!GO:0006818;hydrogen transport;0.0228068996506353!GO:0016859;cis-trans isomerase activity;0.0229734114744153!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0234562939426453!GO:0030137;COPI-coated vesicle;0.0235871874674224!GO:0046474;glycerophospholipid biosynthetic process;0.0237808205322158!GO:0005952;cAMP-dependent protein kinase complex;0.0237808205322158!GO:0035035;histone acetyltransferase binding;0.0255084323083138!GO:0019894;kinesin binding;0.0256381022795981!GO:0006366;transcription from RNA polymerase II promoter;0.026455892627015!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0269608013862991!GO:0042802;identical protein binding;0.0275061473373276!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0275227705467749!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0275227705467749!GO:0051287;NAD binding;0.0278595032606702!GO:0000904;cellular morphogenesis during differentiation;0.0278640803673666!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0285314747608311!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0285314747608311!GO:0045047;protein targeting to ER;0.0285314747608311!GO:0043284;biopolymer biosynthetic process;0.0285589728058884!GO:0048666;neuron development;0.028637149726693!GO:0005765;lysosomal membrane;0.0289746229144796!GO:0009165;nucleotide biosynthetic process;0.0291962645485671!GO:0031371;ubiquitin conjugating enzyme complex;0.0291962645485671!GO:0000287;magnesium ion binding;0.0291962645485671!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0295820428900388!GO:0033043;regulation of organelle organization and biogenesis;0.0295820428900388!GO:0016079;synaptic vesicle exocytosis;0.0298411066632362!GO:0006661;phosphatidylinositol biosynthetic process;0.0300191389249139!GO:0007005;mitochondrion organization and biogenesis;0.030246003394494!GO:0015992;proton transport;0.0309576546822332!GO:0000059;protein import into nucleus, docking;0.0309768502268833!GO:0006091;generation of precursor metabolites and energy;0.0309905438779184!GO:0048468;cell development;0.0311421320889047!GO:0004576;oligosaccharyl transferase activity;0.0312073072040212!GO:0031124;mRNA 3'-end processing;0.0323607176297215!GO:0007034;vacuolar transport;0.0330702398663659!GO:0008219;cell death;0.0330702398663659!GO:0016265;death;0.0330702398663659!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0330702398663659!GO:0033130;acetylcholine receptor binding;0.0330702398663659!GO:0030659;cytoplasmic vesicle membrane;0.0331211661204222!GO:0044437;vacuolar part;0.0331271030062524!GO:0003676;nucleic acid binding;0.0333191284169571!GO:0008312;7S RNA binding;0.0333622906556189!GO:0005100;Rho GTPase activator activity;0.0333824824220218!GO:0006595;polyamine metabolic process;0.0338801065947078!GO:0016049;cell growth;0.0344466864100049!GO:0001726;ruffle;0.0344466864100049!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0344466864100049!GO:0015002;heme-copper terminal oxidase activity;0.0344466864100049!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0344466864100049!GO:0004129;cytochrome-c oxidase activity;0.0344466864100049!GO:0051726;regulation of cell cycle;0.0344624418591822!GO:0051539;4 iron, 4 sulfur cluster binding;0.0348264811842601!GO:0008022;protein C-terminus binding;0.0349901850551228!GO:0006665;sphingolipid metabolic process;0.035039880361674!GO:0016579;protein deubiquitination;0.0352221421585702!GO:0048667;neuron morphogenesis during differentiation;0.0363343127382213!GO:0048812;neurite morphogenesis;0.0363343127382213!GO:0031175;neurite development;0.036340530865171!GO:0019911;structural constituent of myelin sheath;0.0363435521211676!GO:0006376;mRNA splice site selection;0.0377251015700465!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0377251015700465!GO:0008286;insulin receptor signaling pathway;0.0380025813007561!GO:0016481;negative regulation of transcription;0.0380865260177837!GO:0006713;glucocorticoid catabolic process;0.0382788026453185!GO:0030911;TPR domain binding;0.0386161089006291!GO:0050789;regulation of biological process;0.0389529057498419!GO:0030119;AP-type membrane coat adaptor complex;0.0390434850632377!GO:0000209;protein polyubiquitination;0.0390434850632377!GO:0007049;cell cycle;0.0396373473639595!GO:0043025;cell soma;0.0406924403438065!GO:0004004;ATP-dependent RNA helicase activity;0.0407763827330377!GO:0016272;prefoldin complex;0.0410830866682817!GO:0042026;protein refolding;0.0411540086522534!GO:0033673;negative regulation of kinase activity;0.0418746084197337!GO:0006469;negative regulation of protein kinase activity;0.0418746084197337!GO:0003725;double-stranded RNA binding;0.0419300706905492!GO:0012501;programmed cell death;0.043148033942621!GO:0031110;regulation of microtubule polymerization or depolymerization;0.043919025261583!GO:0051252;regulation of RNA metabolic process;0.0439559316091927!GO:0000096;sulfur amino acid metabolic process;0.0440546822565725!GO:0006399;tRNA metabolic process;0.0442349890192177!GO:0042552;myelination;0.0449223556433415!GO:0000074;regulation of progression through cell cycle;0.0449392947596301!GO:0006644;phospholipid metabolic process;0.0449392947596301!GO:0004183;carboxypeptidase E activity;0.0449624031071995!GO:0030070;insulin processing;0.0449624031071995!GO:0006364;rRNA processing;0.0472485489251587!GO:0003711;transcription elongation regulator activity;0.0477345377401356!GO:0009066;aspartate family amino acid metabolic process;0.0479876618680409!GO:0006915;apoptosis;0.0479876618680409!GO:0043488;regulation of mRNA stability;0.0479876618680409!GO:0043487;regulation of RNA stability;0.0479876618680409!GO:0019207;kinase regulator activity;0.0495572789643341
|sample_id=10195
|sample_id=10195
|sample_note=
|sample_note=

Revision as of 20:08, 25 June 2012


Name:olfactory region, adult
Species:Human (Homo sapiens)
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Genomic View: UCSC
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueolfactory apparatus
dev stageNA
sexfemale
age87
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationNA
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberR1234063-10
sample typeNA
extraction protocol (Details)NA
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.39
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.52
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.314
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0.065
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.216
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.491
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.065
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.122
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.00552
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.257
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.327
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.172
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.065
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.175
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.707
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.065
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0124
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0486
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.122
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.122
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0258
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.847
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.065
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.122
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.39
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.065
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.122
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.573
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.592
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0128
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0769
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.626
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.065
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.443
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.43
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.54
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.796
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.823
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.122
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.172
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.172
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.702
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.513
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.172
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.468
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.065
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.065
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.513
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data no result for this sample


TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12611

Jaspar motifP-value
MA0002.20.0327
MA0003.10.299
MA0004.10.332
MA0006.10.282
MA0007.10.205
MA0009.10.155
MA0014.10.565
MA0017.10.00183
MA0018.20.391
MA0019.10.774
MA0024.10.912
MA0025.10.67
MA0027.10.647
MA0028.10.0364
MA0029.10.0135
MA0030.10.74
MA0031.10.523
MA0035.20.00779
MA0038.10.496
MA0039.20.0913
MA0040.10.887
MA0041.10.78
MA0042.10.952
MA0043.10.513
MA0046.10.00206
MA0047.20.0242
MA0048.10.111
MA0050.10.0178
MA0051.10.0851
MA0052.10.771
MA0055.10.00109
MA0057.11
MA0058.10.264
MA0059.10.0844
MA0060.10.882
MA0061.10.00564
MA0062.20.00129
MA0065.26.53584e-4
MA0066.10.0159
MA0067.10.966
MA0068.10.56
MA0069.10.488
MA0070.10.674
MA0071.10.0221
MA0072.10.174
MA0073.10.426
MA0074.10.217
MA0076.10.071
MA0077.10.31
MA0078.10.858
MA0079.20.633
MA0080.22.50156e-9
MA0081.10.0254
MA0083.10.025
MA0084.10.777
MA0087.10.755
MA0088.10.156
MA0090.10.303
MA0091.10.586
MA0092.10.429
MA0093.10.327
MA0099.23.45179e-20
MA0100.10.551
MA0101.17.31694e-4
MA0102.20.0483
MA0103.10.23
MA0104.20.403
MA0105.10.00161
MA0106.10.0228
MA0107.10.00149
MA0108.20.254
MA0111.10.549
MA0112.20.00108
MA0113.10.286
MA0114.10.00239
MA0115.10.742
MA0116.10.00696
MA0117.10.894
MA0119.10.0839
MA0122.10.6
MA0124.10.596
MA0125.10.351
MA0131.10.852
MA0135.10.0665
MA0136.11.47971e-14
MA0137.20.252
MA0138.20.204
MA0139.10.407
MA0140.12.89402e-4
MA0141.10.00705
MA0142.10.965
MA0143.10.523
MA0144.10.213
MA0145.10.172
MA0146.10.012
MA0147.10.288
MA0148.10.0492
MA0149.10.017
MA0150.17.09415e-5
MA0152.10.651
MA0153.10.128
MA0154.10.048
MA0155.10.643
MA0156.11.53101e-9
MA0157.10.317
MA0159.10.00568
MA0160.10.0097
MA0162.10.14
MA0163.12.4137e-5
MA0164.10.827
MA0258.10.0124
MA0259.10.81



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12611

Novel motifP-value
10.0512
100.0448
1000.309
1010.416
1020.751
1030.209
1040.156
1050.117
1060.0453
1070.13
1080.905
1090.00273
110.0127
1100.0495
1110.152
1120.51
1130.395
1140.212
1150.918
1160.233
1170.00954
1180.151
1190.227
120.472
1200.253
1210.291
1220.922
1230.788
1240.0747
1250.2
1260.0223
1270.598
1280.241
1290.574
137.90152e-4
1300.16
1310.121
1320.59
1330.0329
1340.511
1350.172
1360.002
1370.751
1380.876
1390.19
140.785
1400.653
1410.649
1420.952
1430.0683
1440.949
1450.103
1460.415
1470.767
1480.299
1490.336
150.0598
1500.142
1510.617
1520.0765
1530.909
1540.46
1550.748
1560.332
1570.437
1580.206
1590.0126
160.0537
1600.285
1610.286
1620.7
1630.745
1640.0394
1650.0379
1660.914
1670.821
1680.542
1690.0107
170.154
180.171
190.186
20.95
200.106
210.0947
220.214
230.425
240.0356
250.44
261.23383e-4
270.919
280.639
290.00978
30.0333
300.805
310.963
320.0565
330.0418
340.648
350.61
360.137
370.027
380.326
390.204
40.744
400.0261
410.337
420.18
430.105
440.317
450.686
460.083
470.0676
480.0555
490.194
50.534
500.293
510.497
520.586
530.909
540.414
550.613
560.451
570.324
580.307
590.108
60.778
600.0657
610.0605
620.197
630.174
640.217
650.268
660.114
670.321
680.177
690.529
70.0439
700.0497
710.00961
720.345
730.0228
740.85
750.0287
760.398
770.2
780.00159
790.482
80.0756
800.545
810.722
820.604
830.0384
840.546
850.264
860.167
871.31517e-4
880.839
890.616
90.378
900.112
910.781
920.604
930.951
940.156
950.0091
960.974
970.682
980.307
990.66



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12611


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000922 (embryo)
0003112 (olfactory region)
0002100 (trunk)
0000033 (head)
0000926 (mesoderm)
0000479 (tissue)
0000062 (organ)
0000475 (organism subdivision)
0004765 (skeletal element)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0000075 (subdivision of skeletal system)
0003104 (mesenchyme)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0005253 (head mesenchyme)
0002532 (epiblast (generic))
0002329 (somite)
0003128 (cranium)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002241 (chondrocranium)
0003129 (skull)
0001703 (neurocranium)
0003077 (paraxial mesoderm)
0009142 (entire embryonic mesenchyme)
0004288 (skeleton)
0006603 (presumptive mesoderm)
0004761 (cartilaginous neurocranium)
0003089 (sclerotome)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)
0009617 (head paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FF:10195-103E6&oldid=1834812"