FFCP PHASE1:Mm9::chr15:53734027..53734070,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr15:53734027..53734070,- | |id=chr15:53734027..53734070,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.89e-14!71;UBERON:0003075!7.89e-14!71;UBERON:0007284!7.89e-14!71;UBERON:0004121!8.97e-14!102;UBERON:0000924!8.97e-14!102;UBERON:0006601!8.97e-14!102;UBERON:0001017!1.68e-13!73;UBERON:0005743!1.68e-13!73;UBERON:0000073!9.23e-13!75;UBERON:0001016!9.23e-13!75;UBERON:0000033!9.97e-13!63;UBERON:0001049!4.20e-12!52;UBERON:0005068!4.20e-12!52;UBERON:0006241!4.20e-12!52;UBERON:0007135!4.20e-12!52;UBERON:0000955!7.52e-12!50;UBERON:0006238!7.52e-12!50;UBERON:0002616!2.97e-11!49;UBERON:0002020!1.22e-10!34;UBERON:0003056!5.85e-10!49;UBERON:0003080!5.00e-09!40;UBERON:0002791!6.00e-09!29;UBERON:0003528!6.00e-09!29;UBERON:0001893!6.00e-09!29;UBERON:0002780!1.59e-08!39;UBERON:0001890!1.59e-08!39;UBERON:0006240!1.59e-08!39;UBERON:0007023!2.40e-08!51;UBERON:0002021!6.51e-07!10;UBERON:0000411!6.51e-07!10;UBERON:0001950!6.51e-07!10;UBERON:0002619!6.97e-07!17;UBERON:0000956!9.10e-07!21;UBERON:0001869!9.10e-07!21;UBERON:0000203!9.10e-07!21;UBERON:0004111!9.43e-07!122 | |ontology_enrichment_uberon=UBERON:0002346!7.89e-14!71;UBERON:0003075!7.89e-14!71;UBERON:0007284!7.89e-14!71;UBERON:0004121!8.97e-14!102;UBERON:0000924!8.97e-14!102;UBERON:0006601!8.97e-14!102;UBERON:0001017!1.68e-13!73;UBERON:0005743!1.68e-13!73;UBERON:0000073!9.23e-13!75;UBERON:0001016!9.23e-13!75;UBERON:0000033!9.97e-13!63;UBERON:0001049!4.20e-12!52;UBERON:0005068!4.20e-12!52;UBERON:0006241!4.20e-12!52;UBERON:0007135!4.20e-12!52;UBERON:0000955!7.52e-12!50;UBERON:0006238!7.52e-12!50;UBERON:0002616!2.97e-11!49;UBERON:0002020!1.22e-10!34;UBERON:0003056!5.85e-10!49;UBERON:0003080!5.00e-09!40;UBERON:0002791!6.00e-09!29;UBERON:0003528!6.00e-09!29;UBERON:0001893!6.00e-09!29;UBERON:0002780!1.59e-08!39;UBERON:0001890!1.59e-08!39;UBERON:0006240!1.59e-08!39;UBERON:0007023!2.40e-08!51;UBERON:0002021!6.51e-07!10;UBERON:0000411!6.51e-07!10;UBERON:0001950!6.51e-07!10;UBERON:0002619!6.97e-07!17;UBERON:0000956!9.10e-07!21;UBERON:0001869!9.10e-07!21;UBERON:0000203!9.10e-07!21;UBERON:0004111!9.43e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.32e-14,64;UBERON:0003075,8.32e-14,64;UBERON:0007284,8.32e-14,64;UBERON:0000073,1.87e-13,54;UBERON:0001017,2.85e-13,73;UBERON:0004121,1.37e-12,95;UBERON:0000924,1.37e-12,95;UBERON:0006601,1.37e-12,95;UBERON:0001049,2.04e-12,52;UBERON:0005068,2.04e-12,52;UBERON:0006241,2.04e-12,52;UBERON:0007135,2.04e-12,52;UBERON:0001016,2.23e-12,75;UBERON:0010371,3.29e-12,73;UBERON:0002020,3.16e-11,34;UBERON:0000955,1.44e-10,47;UBERON:0006238,1.44e-10,47;UBERON:0002616,6.46e-10,46;UBERON:0003528,3.20e-09,29;UBERON:0002791,3.20e-09,29;UBERON:0001893,3.20e-09,29;UBERON:0003056,3.34e-09,49;UBERON:0007023,4.49e-09,51;UBERON:0010314,6.42e-09,92;UBERON:0003080,1.21e-08,40;UBERON:0004111,3.84e-08,122;UBERON:0002780,4.37e-08,39;UBERON:0001890,4.37e-08,39;UBERON:0006240,4.37e-08,39;UBERON:0002021,4.69e-08,10;UBERON:0000411,4.69e-08,10;UBERON:0001950,4.69e-08,10;UBERON:0002619,2.45e-07,17 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,5.3577272795174,0,0,0,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,2.88851619751275,1.16364251750945,1.83752420636132,0,0,0,0,0,0,0.629484089877886,1.31790010585369,0.367093504323363,0,0.436050312760893,0.439372365468944,2.13872888981712,0.419959264876088,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.24427534770173,0.540023753326763,0.841299845405528,2.57085885963423,2.20868540951614,1.22490799214954,0.862609239164127,1.83843757322004,5.50579404996943,5.74593021383345,7.68032666281217,1.71452174049252,1.18933936683133,1.56274011167028,3.07101298901519,3.93933827022176,5.19514042441154,5.00868595305235,4.8406371471695,4.10078780815661,0.075726193333184,0.604572480854284,13.3337664802772,1.72084775396277,0,0,0,0,2.10666630197628,0,0,0,1.12674735821344,0,0,0,8.65964164044856,8.86759529162845,8.08839112023653,1.48439043634778,0.517875767294343,10.8362761517322,0.693941307064543,0.304465478312141,0.691846491768175,1.20578112442098,0.940709657085638,3.26733137457156,0.494389935468748,3.61498392299779,0,0.161766849947409,0.441683036920787,0.484875253135222,1.86391761218122,13.7606974595427,11.3101221679266,0.766371165625774,0.359445373517761,0.599902730993408,0,10.0359728401231,12.8100168789215,5.40313714085317,13.7321212951898,9.97290283588289,8.72709787150152,9.73447578406546,0.305518091550949,1.24406970610093,1.76905930903572,2.10441855886474,0.780722657776222,1.60931473103431,0.720248519221397,1.65775299619287,1.08858398642125,2.3060469651273,2.71735001223214,3.62184719034622,0.646703978798527,1.13463648100692,1.75951124163949,0.219195732427575,1.39023624612799,0.696504333044333,0.823128545631774,0.398068533636986,0,0.257347907114715,0,0.621377317606506,0.703578179943289,0.36012412292203,0,0.196764231747404,0.771335564436891,0.930135779001631,0.804820204198858,0.233530684734339,0.493679549740441,0.985004784474571,2.02672023864639,3.07019973593198,2.41505126820156,3.75777972529041,13.6688466566683,2.77842453424068,0.330418782983798,0.528901133327089,0.639864751605702,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0.760902504450237,0.949058123089023,0.494096864172033,1.75934646160189,1.1937388322469,1.16978452271472,0.898819408654221,2.37751854862164,2.98711909881551,0.189667900953082,0.913988100877831,2.25415471346161,0.610953983535943,0.969762435838129,0.561086559122548,2.59269802209455,6.19962621514329,3.61097074035162,4.19550357334122,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.964887042726734,19.3990849674935,0.37898282354097,0.325929952884052,0.678980343100753,0.938760993154008,2.1775813467436,2.85652369063216,1.95133647857799,5.99013547603526,5.09368786192182,6.05928120898451,10.8149787712387,11.3972088031491,13.5970115066621,0,0.54390568381871,1.96705709207614,3.03530420935206,7.86697890940181,7.97039468826982,0,0.504941854408746,2.83957397474631,2.34263246577983,1.50796378412959,3.58453196928828,0.891194696329576,3.67999490025482,1.61924280669958,2.33804686329049,4.74345333535828,17.9939937196212,4.40014264145633,0,0.651547837414304,8.08353602565424,0,0.242780636154981,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0,1.45413491791002,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,3.74483566329167,0.540183282093931,0,0.428674070063185,1.06404140185364,0.891844088010353,1.64549020602121,0.913394847343798,3.28540391289194,2.1183207086382,13.2317038832977,1.48397627647332,0,0.361877549568935,0.477489376012546,0.492422699235184,0.582961673259701,6.86073617438886,0.341741761595705,0.206386867963223,0.370389054739423,0,0.546776910884101,0.228778173206523,3.56954702987096,3.07893195112048,1.93479963326193,4.77335309007557,0.316335993581135,1.42323626988794,2.80813886136683,2.50905955217362,1.52853794622324,1.61837215661785,0.909188012978695,1.83229159388821,6.99920855775682,1.86401793926078,0,0.299033092087958,0.165458490457098,0.583353565032143,0.258319646955462,0.844780627453891,0.58678619322877,0.651021924219751,0.943734099831398,0,0.864090018773596,0.948033361884535,0,0.410843828659309,0.129920822977795,0.358053391334963,0,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,2.26730383615211,0.443971906748129,0.358855426437903,0.671538465456314,8.69353173144857,4.31669693537719,20.3298302936664,19.7218908752741,6.01886524842436,11.2950368523413,8.28585425712918,6.30185064783336,6.53042092906013,11.6464028361009,6.7985450765073,7.42524750254986,10.3573876741571,9.06284817968409,12.4262474820437,0.726511433089237,0.399024873401031,0.512200817262403,1.45864030240976,1.04806581313991,0.919217542250071,1.77797382241292,2.26638562962784,1.92551525755089,1.26348605881899,1.77435509923168,1.69763707247469,0.842773567228942,1.53660365771686,1.7230640686684,1.90517476513229,1.97003354106254,1.35036454324594,2.06042950401653,0.735994600671987,0,1.59728225543404,1.90748951957857,0.872078499793971,0.846984423737976,0.761531471025089,0.73171189149109,1.31534855718921,0.950628796921032,1.12228454331548,1.30498519936592,1.28055827088233,2.86461730218783,1.23949472948773,1.15743966588685,2.49810577937946,1.16965804222704,0.429742108096597,0.191288332068843,0.441182838239031,0.695603506861264 | |phase1_expression=0.160148847104794,0,0,0,0,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,5.3577272795174,0,0,0,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,2.88851619751275,1.16364251750945,1.83752420636132,0,0,0,0,0,0,0.629484089877886,1.31790010585369,0.367093504323363,0,0.436050312760893,0.439372365468944,2.13872888981712,0.419959264876088,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.24427534770173,0.540023753326763,0.841299845405528,2.57085885963423,2.20868540951614,1.22490799214954,0.862609239164127,1.83843757322004,5.50579404996943,5.74593021383345,7.68032666281217,1.71452174049252,1.18933936683133,1.56274011167028,3.07101298901519,3.93933827022176,5.19514042441154,5.00868595305235,4.8406371471695,4.10078780815661,0.075726193333184,0.604572480854284,13.3337664802772,1.72084775396277,0,0,0,0,2.10666630197628,0,0,0,1.12674735821344,0,0,0,8.65964164044856,8.86759529162845,8.08839112023653,1.48439043634778,0.517875767294343,10.8362761517322,0.693941307064543,0.304465478312141,0.691846491768175,1.20578112442098,0.940709657085638,3.26733137457156,0.494389935468748,3.61498392299779,0,0.161766849947409,0.441683036920787,0.484875253135222,1.86391761218122,13.7606974595427,11.3101221679266,0.766371165625774,0.359445373517761,0.599902730993408,0,10.0359728401231,12.8100168789215,5.40313714085317,13.7321212951898,9.97290283588289,8.72709787150152,9.73447578406546,0.305518091550949,1.24406970610093,1.76905930903572,2.10441855886474,0.780722657776222,1.60931473103431,0.720248519221397,1.65775299619287,1.08858398642125,2.3060469651273,2.71735001223214,3.62184719034622,0.646703978798527,1.13463648100692,1.75951124163949,0.219195732427575,1.39023624612799,0.696504333044333,0.823128545631774,0.398068533636986,0,0.257347907114715,0,0.621377317606506,0.703578179943289,0.36012412292203,0,0.196764231747404,0.771335564436891,0.930135779001631,0.804820204198858,0.233530684734339,0.493679549740441,0.985004784474571,2.02672023864639,3.07019973593198,2.41505126820156,3.75777972529041,13.6688466566683,2.77842453424068,0.330418782983798,0.528901133327089,0.639864751605702,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0.760902504450237,0.949058123089023,0.494096864172033,1.75934646160189,1.1937388322469,1.16978452271472,0.898819408654221,2.37751854862164,2.98711909881551,0.189667900953082,0.913988100877831,2.25415471346161,0.610953983535943,0.969762435838129,0.561086559122548,2.59269802209455,6.19962621514329,3.61097074035162,4.19550357334122,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.964887042726734,19.3990849674935,0.37898282354097,0.325929952884052,0.678980343100753,0.938760993154008,2.1775813467436,2.85652369063216,1.95133647857799,5.99013547603526,5.09368786192182,6.05928120898451,10.8149787712387,11.3972088031491,13.5970115066621,0,0.54390568381871,1.96705709207614,3.03530420935206,7.86697890940181,7.97039468826982,0,0.504941854408746,2.83957397474631,2.34263246577983,1.50796378412959,3.58453196928828,0.891194696329576,3.67999490025482,1.61924280669958,2.33804686329049,4.74345333535828,17.9939937196212,4.40014264145633,0,0.651547837414304,8.08353602565424,0,0.242780636154981,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0,1.45413491791002,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,3.74483566329167,0.540183282093931,0,0.428674070063185,1.06404140185364,0.891844088010353,1.64549020602121,0.913394847343798,3.28540391289194,2.1183207086382,13.2317038832977,1.48397627647332,0,0.361877549568935,0.477489376012546,0.492422699235184,0.582961673259701,6.86073617438886,0.341741761595705,0.206386867963223,0.370389054739423,0,0.546776910884101,0.228778173206523,3.56954702987096,3.07893195112048,1.93479963326193,4.77335309007557,0.316335993581135,1.42323626988794,2.80813886136683,2.50905955217362,1.52853794622324,1.61837215661785,0.909188012978695,1.83229159388821,6.99920855775682,1.86401793926078,0,0.299033092087958,0.165458490457098,0.583353565032143,0.258319646955462,0.844780627453891,0.58678619322877,0.651021924219751,0.943734099831398,0,0.864090018773596,0.948033361884535,0,0.410843828659309,0.129920822977795,0.358053391334963,0,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,2.26730383615211,0.443971906748129,0.358855426437903,0.671538465456314,8.69353173144857,4.31669693537719,20.3298302936664,19.7218908752741,6.01886524842436,11.2950368523413,8.28585425712918,6.30185064783336,6.53042092906013,11.6464028361009,6.7985450765073,7.42524750254986,10.3573876741571,9.06284817968409,12.4262474820437,0.726511433089237,0.399024873401031,0.512200817262403,1.45864030240976,1.04806581313991,0.919217542250071,1.77797382241292,2.26638562962784,1.92551525755089,1.26348605881899,1.77435509923168,1.69763707247469,0.842773567228942,1.53660365771686,1.7230640686684,1.90517476513229,1.97003354106254,1.35036454324594,2.06042950401653,0.735994600671987,0,1.59728225543404,1.90748951957857,0.872078499793971,0.846984423737976,0.761531471025089,0.73171189149109,1.31534855718921,0.950628796921032,1.12228454331548,1.30498519936592,1.28055827088233,2.86461730218783,1.23949472948773,1.15743966588685,2.49810577937946,1.16965804222704,0.429742108096597,0.191288332068843,0.441182838239031,0.695603506861264 | ||
|short_description=p2@Samd12 | |short_description=p2@Samd12 | ||
}} | }} |
Revision as of 12:30, 13 November 2012
Short description: | p2@Samd12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Samd12_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 14bp_to_ENSMUST00000078673_5end |
EntrezGene: | Samd12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.32e-14 | 64 |
neural plate | 8.32e-14 | 64 |
presumptive neural plate | 8.32e-14 | 64 |
regional part of nervous system | 1.87e-13 | 54 |
central nervous system | 2.85e-13 | 73 |
ectoderm-derived structure | 1.37e-12 | 95 |
ectoderm | 1.37e-12 | 95 |
presumptive ectoderm | 1.37e-12 | 95 |
neural tube | 2.04e-12 | 52 |
neural rod | 2.04e-12 | 52 |
future spinal cord | 2.04e-12 | 52 |
neural keel | 2.04e-12 | 52 |
nervous system | 2.23e-12 | 75 |
ecto-epithelium | 3.29e-12 | 73 |
gray matter | 3.16e-11 | 34 |
brain | 1.44e-10 | 47 |
future brain | 1.44e-10 | 47 |
regional part of brain | 6.46e-10 | 46 |
brain grey matter | 3.20e-09 | 29 |
regional part of telencephalon | 3.20e-09 | 29 |
telencephalon | 3.20e-09 | 29 |
pre-chordal neural plate | 3.34e-09 | 49 |
adult organism | 4.49e-09 | 51 |
structure with developmental contribution from neural crest | 6.42e-09 | 92 |
anterior neural tube | 1.21e-08 | 40 |
anatomical conduit | 3.84e-08 | 122 |
regional part of forebrain | 4.37e-08 | 39 |
forebrain | 4.37e-08 | 39 |
future forebrain | 4.37e-08 | 39 |
occipital lobe | 4.69e-08 | 10 |
visual cortex | 4.69e-08 | 10 |
neocortex | 4.69e-08 | 10 |
regional part of cerebral cortex | 2.45e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.