FFCP PHASE1:Mm9::chr11:102308926..102308956,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217219|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=-18bp_to_ENSMUST00000152015_5end|description=CAGE_peak_2_at_Fam171a2_5end|id=chr11:102308926..102308956,-|ontology_enrichment_celltype=CL:0000117!6.33e-15!23;CL:0000337!6.33e-15!23;CL:0000540!1.11e-14!33;CL:0000047!1.11e-14!33;CL:0000031!1.11e-14!33;CL:0000404!1.11e-14!33;CL:0000393!4.91e-14!39;CL:0000211!4.91e-14!39;CL:0000221!8.85e-14!44;CL:0000133!8.85e-14!44;CL:0002319!2.19e-13!43;CL:0000055!7.91e-13!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.23e-15,23;CL:0000337,3.23e-15,23;CL:0000540,5.75e-15,33;CL:0000047,5.75e-15,33;CL:0000031,5.75e-15,33;CL:0000404,5.75e-15,33;CL:0000393,2.63e-14,39;CL:0000211,2.63e-14,39;CL:0000221,4.79e-14,44;CL:0000133,4.79e-14,44;CL:0002319,1.21e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.88e-25!73;UBERON:0005743!1.88e-25!73;UBERON:0000073!9.59e-25!75;UBERON:0001016!9.59e-25!75;UBERON:0004121!1.96e-22!102;UBERON:0000924!1.96e-22!102;UBERON:0006601!1.96e-22!102;UBERON:0002346!1.33e-20!71;UBERON:0003075!1.33e-20!71;UBERON:0007284!1.33e-20!71;UBERON:0001049!2.25e-20!52;UBERON:0005068!2.25e-20!52;UBERON:0006241!2.25e-20!52;UBERON:0007135!2.25e-20!52;UBERON:0000033!3.71e-20!63;UBERON:0003056!4.93e-19!49;UBERON:0000955!1.23e-18!50;UBERON:0006238!1.23e-18!50;UBERON:0002616!2.00e-18!49;UBERON:0002020!8.17e-18!34;UBERON:0003080!5.86e-17!40;UBERON:0002780!9.09e-17!39;UBERON:0001890!9.09e-17!39;UBERON:0006240!9.09e-17!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000956!6.40e-10!21;UBERON:0001869!6.40e-10!21;UBERON:0000203!6.40e-10!21;UBERON:0000153!1.01e-08!94;UBERON:0000025!1.08e-08!114;UBERON:0004111!2.24e-08!122;UBERON:0007811!8.49e-08!86;UBERON:0002619!1.11e-07!17;UBERON:0000468!2.80e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.65e-26,73;UBERON:0001016,2.99e-25,75;UBERON:0004121,1.34e-23,95;UBERON:0000924,1.34e-23,95;UBERON:0006601,1.34e-23,95;UBERON:0002346,8.88e-23,64;UBERON:0003075,8.88e-23,64;UBERON:0007284,8.88e-23,64;UBERON:0000073,3.48e-22,54;UBERON:0001049,8.73e-21,52;UBERON:0005068,8.73e-21,52;UBERON:0006241,8.73e-21,52;UBERON:0007135,8.73e-21,52;UBERON:0010371,1.11e-20,73;UBERON:0003056,2.05e-19,49;UBERON:0002020,3.61e-18,34;UBERON:0000955,6.84e-18,47;UBERON:0006238,6.84e-18,47;UBERON:0002616,1.11e-17,46;UBERON:0003080,2.70e-17,40;UBERON:0010314,2.98e-17,92;UBERON:0002780,4.24e-17,39;UBERON:0001890,4.24e-17,39;UBERON:0006240,4.24e-17,39;UBERON:0003528,7.47e-15,29;UBERON:0002791,7.47e-15,29;UBERON:0001893,7.47e-15,29;UBERON:0000956,4.21e-10,21;UBERON:0001869,4.21e-10,21;UBERON:0000203,4.21e-10,21;UBERON:0000025,2.45e-08,114;UBERON:0004111,5.51e-08,122;UBERON:0002619,8.16e-08,17|phase1_expression=9.76907967339243,0,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,5.3577272795174,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,5.79125362687656,8.31290836000019,14.1330999164495,4.69434806608824,8.28495594245697,1.5378032791413,2.72201858703997,1.53985063787899,7.18762821824858,0,0,0,1.02903774414379,4.29800159908135,2.57836046138721,41.6771909370771,54.4860708650194,57.6786577190623,5.76035704517525,1.77858959222228,0.899899717281399,0,1.4209602298922,8.98800331555214,11.1423308543251,30.4847460186924,32.9414489529325,26.7112700916255,26.5655415495537,25.6207507503872,31.7251169966731,35.1752878636927,41.3648453974509,7.70811166995721,10.7257363991558,10.752457327937,41.0166354840903,52.8798580021928,28.129322010065,11.1673199600552,14.6318278608237,14.6686317865738,26.2219441071564,27.620106075026,37.2798891650601,1.8931548333296,3.6274348851257,5.79728977403356,2.58127163094416,0,0,0.649776417447669,0,1.26399978118577,5.62420064507591,3.89679006904303,3.88673531961374,9.85903938436764,0,5.09610479413291,0,1.5154372870785,1.01343946190039,0,1.02765491747154,0,0.593768556259299,7.63335437770998,7.00270600117925,4.15107895060905,3.61734337326294,3.17489509266403,0.753999547978053,0.494389935468748,0.578397427679647,0,3.23533699894818,0.662524555381181,0,0,7.02673912827713,12.1479089951804,0.510914110417183,0.718890747035522,0.599902730993408,0.254140454146129,7.78911324905078,10.980014467647,30.9109706197646,10.7771078519211,7.67146371990992,9.55825004973976,8.59878694259116,8.96186401882783,2.23932547098167,2.52722758433675,5.26104639716185,10.9301172088671,13.3343220571414,12.7844112161798,6.78171680260718,8.50456239391598,8.19927809823039,9.27647073141315,3.62184719034622,7.97601573851516,7.18603104637713,7.38994721488585,12.4941567483718,7.50727572909114,8.358051996532,5.96768195583036,8.7575077400137,0.702213187313235,0.257347907114715,0,3.93538967817454,4.22146907965973,4.32148947506436,4.49814997611899,4.9191057936851,2.93107514486019,3.48800917125612,4.56064782379353,3.38619492864792,3.45575684818309,3.447516745661,2.51313309592153,1.60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| ||
|EntrezGene=217219 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENSMUST00000152015_5end | |||
|description=CAGE_peak_2_at_Fam171a2_5end | |||
|id=chr11:102308926..102308956,- | |||
|ontology_enrichment_celltype=CL:0000117!6.33e-15!23;CL:0000337!6.33e-15!23;CL:0000540!1.11e-14!33;CL:0000047!1.11e-14!33;CL:0000031!1.11e-14!33;CL:0000404!1.11e-14!33;CL:0000393!4.91e-14!39;CL:0000211!4.91e-14!39;CL:0000221!8.85e-14!44;CL:0000133!8.85e-14!44;CL:0002319!2.19e-13!43;CL:0000055!7.91e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.23e-15,23;CL:0000337,3.23e-15,23;CL:0000540,5.75e-15,33;CL:0000047,5.75e-15,33;CL:0000031,5.75e-15,33;CL:0000404,5.75e-15,33;CL:0000393,2.63e-14,39;CL:0000211,2.63e-14,39;CL:0000221,4.79e-14,44;CL:0000133,4.79e-14,44;CL:0002319,1.21e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.88e-25!73;UBERON:0005743!1.88e-25!73;UBERON:0000073!9.59e-25!75;UBERON:0001016!9.59e-25!75;UBERON:0004121!1.96e-22!102;UBERON:0000924!1.96e-22!102;UBERON:0006601!1.96e-22!102;UBERON:0002346!1.33e-20!71;UBERON:0003075!1.33e-20!71;UBERON:0007284!1.33e-20!71;UBERON:0001049!2.25e-20!52;UBERON:0005068!2.25e-20!52;UBERON:0006241!2.25e-20!52;UBERON:0007135!2.25e-20!52;UBERON:0000033!3.71e-20!63;UBERON:0003056!4.93e-19!49;UBERON:0000955!1.23e-18!50;UBERON:0006238!1.23e-18!50;UBERON:0002616!2.00e-18!49;UBERON:0002020!8.17e-18!34;UBERON:0003080!5.86e-17!40;UBERON:0002780!9.09e-17!39;UBERON:0001890!9.09e-17!39;UBERON:0006240!9.09e-17!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000956!6.40e-10!21;UBERON:0001869!6.40e-10!21;UBERON:0000203!6.40e-10!21;UBERON:0000153!1.01e-08!94;UBERON:0000025!1.08e-08!114;UBERON:0004111!2.24e-08!122;UBERON:0007811!8.49e-08!86;UBERON:0002619!1.11e-07!17;UBERON:0000468!2.80e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.65e-26,73;UBERON:0001016,2.99e-25,75;UBERON:0004121,1.34e-23,95;UBERON:0000924,1.34e-23,95;UBERON:0006601,1.34e-23,95;UBERON:0002346,8.88e-23,64;UBERON:0003075,8.88e-23,64;UBERON:0007284,8.88e-23,64;UBERON:0000073,3.48e-22,54;UBERON:0001049,8.73e-21,52;UBERON:0005068,8.73e-21,52;UBERON:0006241,8.73e-21,52;UBERON:0007135,8.73e-21,52;UBERON:0010371,1.11e-20,73;UBERON:0003056,2.05e-19,49;UBERON:0002020,3.61e-18,34;UBERON:0000955,6.84e-18,47;UBERON:0006238,6.84e-18,47;UBERON:0002616,1.11e-17,46;UBERON:0003080,2.70e-17,40;UBERON:0010314,2.98e-17,92;UBERON:0002780,4.24e-17,39;UBERON:0001890,4.24e-17,39;UBERON:0006240,4.24e-17,39;UBERON:0003528,7.47e-15,29;UBERON:0002791,7.47e-15,29;UBERON:0001893,7.47e-15,29;UBERON:0000956,4.21e-10,21;UBERON:0001869,4.21e-10,21;UBERON:0000203,4.21e-10,21;UBERON:0000025,2.45e-08,114;UBERON:0004111,5.51e-08,122;UBERON:0002619,8.16e-08,17 | |||
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| |||
|short_description=p2@Fam171a2 | |||
}} |
Revision as of 18:21, 12 September 2013
Short description: | p2@Fam171a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam171a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -18bp_to_ENSMUST00000152015_5end |
EntrezGene: | Fam171a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.23e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.23e-15 | 23 |
neuron | 5.75e-15 | 33 |
neuronal stem cell | 5.75e-15 | 33 |
neuroblast | 5.75e-15 | 33 |
electrically signaling cell | 5.75e-15 | 33 |
electrically responsive cell | 2.63e-14 | 39 |
electrically active cell | 2.63e-14 | 39 |
ectodermal cell | 4.79e-14 | 44 |
neurectodermal cell | 4.79e-14 | 44 |
neural cell | 1.21e-13 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.65e-26 | 73 |
nervous system | 2.99e-25 | 75 |
ectoderm-derived structure | 1.34e-23 | 95 |
ectoderm | 1.34e-23 | 95 |
presumptive ectoderm | 1.34e-23 | 95 |
neurectoderm | 8.88e-23 | 64 |
neural plate | 8.88e-23 | 64 |
presumptive neural plate | 8.88e-23 | 64 |
regional part of nervous system | 3.48e-22 | 54 |
neural tube | 8.73e-21 | 52 |
neural rod | 8.73e-21 | 52 |
future spinal cord | 8.73e-21 | 52 |
neural keel | 8.73e-21 | 52 |
ecto-epithelium | 1.11e-20 | 73 |
pre-chordal neural plate | 2.05e-19 | 49 |
gray matter | 3.61e-18 | 34 |
brain | 6.84e-18 | 47 |
future brain | 6.84e-18 | 47 |
regional part of brain | 1.11e-17 | 46 |
anterior neural tube | 2.70e-17 | 40 |
structure with developmental contribution from neural crest | 2.98e-17 | 92 |
regional part of forebrain | 4.24e-17 | 39 |
forebrain | 4.24e-17 | 39 |
future forebrain | 4.24e-17 | 39 |
brain grey matter | 7.47e-15 | 29 |
regional part of telencephalon | 7.47e-15 | 29 |
telencephalon | 7.47e-15 | 29 |
cerebral cortex | 4.21e-10 | 21 |
cerebral hemisphere | 4.21e-10 | 21 |
pallium | 4.21e-10 | 21 |
tube | 2.45e-08 | 114 |
anatomical conduit | 5.51e-08 | 122 |
regional part of cerebral cortex | 8.16e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.