FFCP PHASE1:Mm9::chr11:71564558..71564561,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216881|HGNC=|MCL_coexpression_id=20|UniProt=Q80XH4|association_with_transcript=76bp_to_ENSMUST00000108511,uc007jxw.1_5end|description=CAGE_peak_6_at_Wscd1_5end|id=chr11:71564558..71564561,+|ontology_enrichment_celltype=CL:0000117!3.98e-21!23;CL:0000337!3.98e-21!23;CL:0002319!7.43e-16!43;CL:0000221!3.00e-15!44;CL:0000133!3.00e-15!44;CL:0000540!2.38e-13!33;CL:0000047!2.38e-13!33;CL:0000031!2.38e-13!33;CL:0000404!2.38e-13!33;CL:0000055!3.72e-12!50;CL:0000393!4.92e-10!39;CL:0000211!4.92e-10!39|ontology_enrichment_celltype_v019_2=CL:0002614,1.16e-15,3;CL:0002610,4.47e-15,3;CL:0000117,1.20e-12,23;CL:0000337,1.20e-12,23;CL:0002319,5.50e-10,43;CL:0000221,9.99e-10,44;CL:0000133,9.99e-10,44;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33;CL:0000393,4.54e-07,39;CL:0000211,4.54e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.74e-32!73;UBERON:0005743!1.74e-32!73;UBERON:0000073!3.63e-32!75;UBERON:0001016!3.63e-32!75;UBERON:0001049!1.04e-28!52;UBERON:0005068!1.04e-28!52;UBERON:0006241!1.04e-28!52;UBERON:0007135!1.04e-28!52;UBERON:0000955!3.48e-27!50;UBERON:0006238!3.48e-27!50;UBERON:0000033!1.08e-26!63;UBERON:0002616!1.69e-26!49;UBERON:0004121!2.00e-26!102;UBERON:0000924!2.00e-26!102;UBERON:0006601!2.00e-26!102;UBERON:0002346!1.25e-25!71;UBERON:0003075!1.25e-25!71;UBERON:0007284!1.25e-25!71;UBERON:0003056!5.56e-22!49;UBERON:0007811!2.37e-21!86;UBERON:0002020!7.01e-20!34;UBERON:0003080!1.22e-19!40;UBERON:0002780!1.37e-18!39;UBERON:0001890!1.37e-18!39;UBERON:0006240!1.37e-18!39;UBERON:0000153!5.30e-18!94;UBERON:0002791!6.04e-16!29;UBERON:0003528!6.04e-16!29;UBERON:0001893!6.04e-16!29;UBERON:0000025!5.75e-10!114;UBERON:0003076!1.26e-09!12;UBERON:0003057!1.26e-09!12;UBERON:0000956!5.51e-09!21;UBERON:0001869!5.51e-09!21;UBERON:0000203!5.51e-09!21;UBERON:0002420!5.59e-09!8;UBERON:0007245!5.59e-09!8;UBERON:0010009!5.59e-09!8;UBERON:0010011!5.59e-09!8;UBERON:0000454!5.59e-09!8;UBERON:0004111!2.44e-08!122;UBERON:0002298!7.65e-08!6;UBERON:0000475!8.23e-08!200|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.37e-20,4;UBERON:0001891,1.37e-20,4;UBERON:0009616,1.37e-20,4;UBERON:0010286,1.37e-20,4;UBERON:0001017,9.22e-20,73;UBERON:0001016,3.57e-19,75;UBERON:0000073,1.92e-18,54;UBERON:0002038,1.16e-15,3;UBERON:0009663,1.16e-15,3;UBERON:0009661,1.16e-15,3;UBERON:0000125,1.16e-15,3;UBERON:0002308,1.16e-15,3;UBERON:0002420,1.79e-15,8;UBERON:0007245,1.79e-15,8;UBERON:0010009,1.79e-15,8;UBERON:0010011,1.79e-15,8;UBERON:0000454,1.79e-15,8;UBERON:0004684,4.47e-15,3;UBERON:0002275,4.47e-15,3;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0001049,2.47e-14,52;UBERON:0005068,2.47e-14,52;UBERON:0006241,2.47e-14,52;UBERON:0007135,2.47e-14,52;UBERON:0002616,1.71e-11,46;UBERON:0002346,2.80e-11,64;UBERON:0003075,2.80e-11,64;UBERON:0007284,2.80e-11,64;UBERON:0000955,3.24e-11,47;UBERON:0006238,3.24e-11,47;UBERON:0003080,5.14e-11,40;UBERON:0010371,1.21e-09,73;UBERON:0002780,4.63e-09,39;UBERON:0001890,4.63e-09,39;UBERON:0006240,4.63e-09,39;UBERON:0003056,9.92e-09,49;UBERON:0002020,3.06e-08,34;UBERON:0003528,1.49e-07,29;UBERON:0002791,1.49e-07,29;UBERON:0001893,1.49e-07,29;UBERON:0010314,3.12e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0.414758449233911,0.270011876663381,0.630974884054146,0.285650984403804,0.441737081903227,0.489963196859816,0.575072826109418,0.919218786610021,1.10115880999389,1.14918604276669,1.38245879930619,0.659431438650969,0.457438218012048,1.04182674111352,2.23346399201105,1.12552522006336,1.68078072554491,1.17851434189467,0.711858403995515,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,2.54644086988199,2.28750301409313,0.376963056338593,0.695297280769106,0.511430914660661,2.70124457927428,1.29793010454206,0,0,0,0,0,0.459804208866946,0,0.30140963567143,0.680364991513279,0.512454881139399,0.749613796477831,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,1.05144974282064,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.80275294993896,1.52375192569864,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0,0.15241361331,0,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.365855945745545,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p6@Wscd1}} | ||
|EntrezGene=216881 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q80XH4 | |||
|association_with_transcript=76bp_to_ENSMUST00000108511,uc007jxw.1_5end | |||
|description=CAGE_peak_6_at_Wscd1_5end | |||
|id=chr11:71564558..71564561,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.98e-21!23;CL:0000337!3.98e-21!23;CL:0002319!7.43e-16!43;CL:0000221!3.00e-15!44;CL:0000133!3.00e-15!44;CL:0000540!2.38e-13!33;CL:0000047!2.38e-13!33;CL:0000031!2.38e-13!33;CL:0000404!2.38e-13!33;CL:0000055!3.72e-12!50;CL:0000393!4.92e-10!39;CL:0000211!4.92e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.16e-15,3;CL:0002610,4.47e-15,3;CL:0000117,1.20e-12,23;CL:0000337,1.20e-12,23;CL:0002319,5.50e-10,43;CL:0000221,9.99e-10,44;CL:0000133,9.99e-10,44;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33;CL:0000393,4.54e-07,39;CL:0000211,4.54e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.74e-32!73;UBERON:0005743!1.74e-32!73;UBERON:0000073!3.63e-32!75;UBERON:0001016!3.63e-32!75;UBERON:0001049!1.04e-28!52;UBERON:0005068!1.04e-28!52;UBERON:0006241!1.04e-28!52;UBERON:0007135!1.04e-28!52;UBERON:0000955!3.48e-27!50;UBERON:0006238!3.48e-27!50;UBERON:0000033!1.08e-26!63;UBERON:0002616!1.69e-26!49;UBERON:0004121!2.00e-26!102;UBERON:0000924!2.00e-26!102;UBERON:0006601!2.00e-26!102;UBERON:0002346!1.25e-25!71;UBERON:0003075!1.25e-25!71;UBERON:0007284!1.25e-25!71;UBERON:0003056!5.56e-22!49;UBERON:0007811!2.37e-21!86;UBERON:0002020!7.01e-20!34;UBERON:0003080!1.22e-19!40;UBERON:0002780!1.37e-18!39;UBERON:0001890!1.37e-18!39;UBERON:0006240!1.37e-18!39;UBERON:0000153!5.30e-18!94;UBERON:0002791!6.04e-16!29;UBERON:0003528!6.04e-16!29;UBERON:0001893!6.04e-16!29;UBERON:0000025!5.75e-10!114;UBERON:0003076!1.26e-09!12;UBERON:0003057!1.26e-09!12;UBERON:0000956!5.51e-09!21;UBERON:0001869!5.51e-09!21;UBERON:0000203!5.51e-09!21;UBERON:0002420!5.59e-09!8;UBERON:0007245!5.59e-09!8;UBERON:0010009!5.59e-09!8;UBERON:0010011!5.59e-09!8;UBERON:0000454!5.59e-09!8;UBERON:0004111!2.44e-08!122;UBERON:0002298!7.65e-08!6;UBERON:0000475!8.23e-08!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.37e-20,4;UBERON:0001891,1.37e-20,4;UBERON:0009616,1.37e-20,4;UBERON:0010286,1.37e-20,4;UBERON:0001017,9.22e-20,73;UBERON:0001016,3.57e-19,75;UBERON:0000073,1.92e-18,54;UBERON:0002038,1.16e-15,3;UBERON:0009663,1.16e-15,3;UBERON:0009661,1.16e-15,3;UBERON:0000125,1.16e-15,3;UBERON:0002308,1.16e-15,3;UBERON:0002420,1.79e-15,8;UBERON:0007245,1.79e-15,8;UBERON:0010009,1.79e-15,8;UBERON:0010011,1.79e-15,8;UBERON:0000454,1.79e-15,8;UBERON:0004684,4.47e-15,3;UBERON:0002275,4.47e-15,3;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0001049,2.47e-14,52;UBERON:0005068,2.47e-14,52;UBERON:0006241,2.47e-14,52;UBERON:0007135,2.47e-14,52;UBERON:0002616,1.71e-11,46;UBERON:0002346,2.80e-11,64;UBERON:0003075,2.80e-11,64;UBERON:0007284,2.80e-11,64;UBERON:0000955,3.24e-11,47;UBERON:0006238,3.24e-11,47;UBERON:0003080,5.14e-11,40;UBERON:0010371,1.21e-09,73;UBERON:0002780,4.63e-09,39;UBERON:0001890,4.63e-09,39;UBERON:0006240,4.63e-09,39;UBERON:0003056,9.92e-09,49;UBERON:0002020,3.06e-08,34;UBERON:0003528,1.49e-07,29;UBERON:0002791,1.49e-07,29;UBERON:0001893,1.49e-07,29;UBERON:0010314,3.12e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0.414758449233911,0.270011876663381,0.630974884054146,0.285650984403804,0.441737081903227,0.489963196859816,0.575072826109418,0.919218786610021,1.10115880999389,1.14918604276669,1.38245879930619,0.659431438650969,0.457438218012048,1.04182674111352,2.23346399201105,1.12552522006336,1.68078072554491,1.17851434189467,0.711858403995515,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,2.54644086988199,2.28750301409313,0.376963056338593,0.695297280769106,0.511430914660661,2.70124457927428,1.29793010454206,0,0,0,0,0,0.459804208866946,0,0.30140963567143,0.680364991513279,0.512454881139399,0.749613796477831,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,1.05144974282064,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.80275294993896,1.52375192569864,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0,0.15241361331,0,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0.365855945745545,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p6@Wscd1 | |||
}} |
Revision as of 20:48, 12 September 2013
Short description: | p6@Wscd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Wscd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 76bp_to_ENSMUST00000108511, uc007jxw.1_5end |
EntrezGene: | Wscd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.16e-15 | 3 |
raphe nuclei neuron | 4.47e-15 | 3 |
CNS neuron (sensu Vertebrata) | 1.20e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-12 | 23 |
neural cell | 5.50e-10 | 43 |
ectodermal cell | 9.99e-10 | 44 |
neurectodermal cell | 9.99e-10 | 44 |
neuron | 1.57e-08 | 33 |
neuronal stem cell | 1.57e-08 | 33 |
neuroblast | 1.57e-08 | 33 |
electrically signaling cell | 1.57e-08 | 33 |
electrically responsive cell | 4.54e-07 | 39 |
electrically active cell | 4.54e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.