FFCP PHASE1:Hg19::chr3:132757119..132757144,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=66000|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28451|TSSclassifier=S|UniProt=Q6UXF1|association_with_transcript=-26bp_to_NM_001136469,NM_023943,uc003eph.2,uc003epi.2_5end|description=CAGE_peak_4_at_TMEM108_5end|id=chr3:132757119..132757144,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;2.23e-12;5!CL:0000064;2.81e-07;3!CL:0000067;2.81e-07;3!CL:0005012;2.81e-07;3!CL:0002304;2.81e-07;3|ontology_enrichment_celltype_v019_2=CL:0000097,7.28e-13,5;CL:0002028,7.28e-13,5;CL:0000064,5.75e-07,3;CL:0000067,5.75e-07,3;CL:0005012,5.75e-07,3;CL:0002304,5.75e-07,3;CL:0000163,6.51e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!2.11e-28!86;UBERON:0007284!2.11e-28!86;UBERON:0002346!5.79e-26!90;UBERON:0001017!1.19e-25!82;UBERON:0005743!2.41e-25!86;UBERON:0007023!4.59e-25!115;UBERON:0000073!1.16e-23!94;UBERON:0001016!1.16e-23!94;UBERON:0001049!1.46e-23!57;UBERON:0005068!1.46e-23!57;UBERON:0006241!1.46e-23!57;UBERON:0007135!1.46e-23!57;UBERON:0002616!2.02e-23!59;UBERON:0000955!3.39e-22!69;UBERON:0006238!3.39e-22!69;UBERON:0003056!2.30e-21!61;UBERON:0004121!7.93e-21!169;UBERON:0000153!1.21e-20!129;UBERON:0007811!1.21e-20!129;UBERON:0000033!1.49e-20!123;UBERON:0000924!1.39e-19!173;UBERON:0006601!1.39e-19!173;UBERON:0003080!1.59e-17!42;UBERON:0002780!5.28e-17!41;UBERON:0001890!5.28e-17!41;UBERON:0006240!5.28e-17!41;UBERON:0001893!8.91e-15!34;UBERON:0001869!2.68e-14!32;UBERON:0002020!3.66e-14!34;UBERON:0003528!3.66e-14!34;UBERON:0002791!4.94e-14!33;UBERON:0000956!2.48e-13!25;UBERON:0000203!2.48e-13!25;UBERON:0000119!1.89e-12!312;UBERON:0001950!4.31e-12!20;UBERON:0002619!7.63e-12!22;UBERON:0000483!1.78e-11!309;UBERON:0000481!3.13e-10!347;UBERON:0000025!5.57e-10!194;UBERON:0000475!1.53e-09!365;UBERON:0000477!2.00e-08!286;UBERON:0004111!4.22e-08!241;UBERON:0000064!1.31e-07!219;UBERON:0004733!2.43e-07!12;UBERON:0002028!2.43e-07!12;UBERON:0007277!2.43e-07!12;UBERON:0003076!3.00e-07!15;UBERON:0003057!3.00e-07!15|ontology_enrichment_uberon_v019=UBERON:0002619;1.47e-18;22!UBERON:0001950;6.41e-18;20!UBERON:0000956;5.76e-16;25!UBERON:0000203;5.76e-16;25!UBERON:0001869;5.52e-14;32!UBERON:0001893;1.93e-12;34!UBERON:0002791;4.35e-12;32!UBERON:0003528;8.49e-11;34!UBERON:0002020;8.49e-11;34!UBERON:0002780;1.82e-10;41!UBERON:0001890;1.82e-10;41!UBERON:0002021;2.53e-07;5!UBERON:0001778;2.81e-07;3!UBERON:0001775;2.81e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.93e-18,22;UBERON:0001950,1.24e-17,20;UBERON:0000956,1.35e-15,25;UBERON:0000203,1.35e-15,25;UBERON:0003056,2.56e-15,61;UBERON:0001869,4.16e-15,32;UBERON:0001893,5.39e-14,34;UBERON:0003075,3.00e-13,82;UBERON:0007284,3.00e-13,82;UBERON:0002791,3.78e-13,32;UBERON:0002780,1.30e-12,41;UBERON:0001890,1.30e-12,41;UBERON:0003080,1.30e-12,41;UBERON:0006240,1.30e-12,41;UBERON:0002346,2.61e-12,86;UBERON:0003528,3.60e-12,34;UBERON:0002020,3.60e-12,34;UBERON:0000073,1.64e-11,53;UBERON:0002616,1.64e-11,53;UBERON:0001017,1.66e-11,81;UBERON:0010371,8.23e-11,104;UBERON:0001049,1.22e-10,56;UBERON:0005068,1.22e-10,56;UBERON:0006241,1.22e-10,56;UBERON:0007135,1.22e-10,56;UBERON:0000955,5.64e-10,68;UBERON:0006238,5.64e-10,68;UBERON:0001016,9.70e-10,89;UBERON:0007023,8.60e-09,114;UBERON:0010314,8.82e-08,132;UBERON:0002021,1.67e-07,5;UBERON:0004121,3.97e-07,171;UBERON:0000924,3.97e-07,171;UBERON:0006601,3.97e-07,171;UBERON:0001778,5.75e-07,3;UBERON:0001775,5.75e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,2.79120467188971,0,0,0,0,0,0,0,0,0.61560529038394,0.612002073732759,0.940364164434263,0.85870796139317,0.821246550437305,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.13441780596881,1.10864698731282,1.40535657109002,1.0478326039817,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0.910161361938026,0,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0.365921118388786,0.530119073285941,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,1.44331342025273,1.04337364477569,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,2.81754988842323,3.31724984865235,1.8735593944205,3.53478813593864,0.571481048629521,1.52795370223311,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=66000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28451 | |||
|TSSclassifier=S | |||
|UniProt=Q6UXF1 | |||
|association_with_transcript=-26bp_to_NM_001136469,NM_023943,uc003eph.2,uc003epi.2_5end | |||
|description=CAGE_peak_4_at_TMEM108_5end | |||
|id=chr3:132757119..132757144,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.23e-12;5!CL:0000064;2.81e-07;3!CL:0000067;2.81e-07;3!CL:0005012;2.81e-07;3!CL:0002304;2.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.28e-13,5;CL:0002028,7.28e-13,5;CL:0000064,5.75e-07,3;CL:0000067,5.75e-07,3;CL:0005012,5.75e-07,3;CL:0002304,5.75e-07,3;CL:0000163,6.51e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.11e-28!86;UBERON:0007284!2.11e-28!86;UBERON:0002346!5.79e-26!90;UBERON:0001017!1.19e-25!82;UBERON:0005743!2.41e-25!86;UBERON:0007023!4.59e-25!115;UBERON:0000073!1.16e-23!94;UBERON:0001016!1.16e-23!94;UBERON:0001049!1.46e-23!57;UBERON:0005068!1.46e-23!57;UBERON:0006241!1.46e-23!57;UBERON:0007135!1.46e-23!57;UBERON:0002616!2.02e-23!59;UBERON:0000955!3.39e-22!69;UBERON:0006238!3.39e-22!69;UBERON:0003056!2.30e-21!61;UBERON:0004121!7.93e-21!169;UBERON:0000153!1.21e-20!129;UBERON:0007811!1.21e-20!129;UBERON:0000033!1.49e-20!123;UBERON:0000924!1.39e-19!173;UBERON:0006601!1.39e-19!173;UBERON:0003080!1.59e-17!42;UBERON:0002780!5.28e-17!41;UBERON:0001890!5.28e-17!41;UBERON:0006240!5.28e-17!41;UBERON:0001893!8.91e-15!34;UBERON:0001869!2.68e-14!32;UBERON:0002020!3.66e-14!34;UBERON:0003528!3.66e-14!34;UBERON:0002791!4.94e-14!33;UBERON:0000956!2.48e-13!25;UBERON:0000203!2.48e-13!25;UBERON:0000119!1.89e-12!312;UBERON:0001950!4.31e-12!20;UBERON:0002619!7.63e-12!22;UBERON:0000483!1.78e-11!309;UBERON:0000481!3.13e-10!347;UBERON:0000025!5.57e-10!194;UBERON:0000475!1.53e-09!365;UBERON:0000477!2.00e-08!286;UBERON:0004111!4.22e-08!241;UBERON:0000064!1.31e-07!219;UBERON:0004733!2.43e-07!12;UBERON:0002028!2.43e-07!12;UBERON:0007277!2.43e-07!12;UBERON:0003076!3.00e-07!15;UBERON:0003057!3.00e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.47e-18;22!UBERON:0001950;6.41e-18;20!UBERON:0000956;5.76e-16;25!UBERON:0000203;5.76e-16;25!UBERON:0001869;5.52e-14;32!UBERON:0001893;1.93e-12;34!UBERON:0002791;4.35e-12;32!UBERON:0003528;8.49e-11;34!UBERON:0002020;8.49e-11;34!UBERON:0002780;1.82e-10;41!UBERON:0001890;1.82e-10;41!UBERON:0002021;2.53e-07;5!UBERON:0001778;2.81e-07;3!UBERON:0001775;2.81e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.93e-18,22;UBERON:0001950,1.24e-17,20;UBERON:0000956,1.35e-15,25;UBERON:0000203,1.35e-15,25;UBERON:0003056,2.56e-15,61;UBERON:0001869,4.16e-15,32;UBERON:0001893,5.39e-14,34;UBERON:0003075,3.00e-13,82;UBERON:0007284,3.00e-13,82;UBERON:0002791,3.78e-13,32;UBERON:0002780,1.30e-12,41;UBERON:0001890,1.30e-12,41;UBERON:0003080,1.30e-12,41;UBERON:0006240,1.30e-12,41;UBERON:0002346,2.61e-12,86;UBERON:0003528,3.60e-12,34;UBERON:0002020,3.60e-12,34;UBERON:0000073,1.64e-11,53;UBERON:0002616,1.64e-11,53;UBERON:0001017,1.66e-11,81;UBERON:0010371,8.23e-11,104;UBERON:0001049,1.22e-10,56;UBERON:0005068,1.22e-10,56;UBERON:0006241,1.22e-10,56;UBERON:0007135,1.22e-10,56;UBERON:0000955,5.64e-10,68;UBERON:0006238,5.64e-10,68;UBERON:0001016,9.70e-10,89;UBERON:0007023,8.60e-09,114;UBERON:0010314,8.82e-08,132;UBERON:0002021,1.67e-07,5;UBERON:0004121,3.97e-07,171;UBERON:0000924,3.97e-07,171;UBERON:0006601,3.97e-07,171;UBERON:0001778,5.75e-07,3;UBERON:0001775,5.75e-07,3 | |||
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| |||
|short_description=p4@TMEM108 | |||
}} |
Revision as of 21:35, 12 September 2013
Short description: | p4@TMEM108 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TMEM108_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_NM_001136469, NM_023943, uc003eph.2, uc003epi.2_5end |
EntrezGene: | TMEM108 |
HGNC: | 28451 |
UniProt: | Q6UXF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.28e-13 | 5 |
basophil mast progenitor cell | 7.28e-13 | 5 |
ciliated cell | 5.75e-07 | 3 |
ciliated epithelial cell | 5.75e-07 | 3 |
multi-ciliated epithelial cell | 5.75e-07 | 3 |
non-pigmented ciliary epithelial cell | 5.75e-07 | 3 |
endocrine cell | 6.51e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.