FFCP PHASE1:Mm9::chr12:118392294..118392303,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:118392294..118392303,+|id=chr12:118392294..118392303,+|ontology_enrichment_celltype=CL:0000117!1.53e-13!23;CL:0000337!1.53e-13!23;CL:0000540!1.03e-07!33;CL:0000047!1.03e-07!33;CL:0000031!1.03e-07!33;CL:0000404!1.03e-07!33;CL:0002319!4.44e-07!43;CL:0000221!8.78e-07!44;CL:0000133!8.78e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.79e-15,23;CL:0000337,1.79e-15,23;CL:0000540,1.52e-10,33;CL:0000047,1.52e-10,33;CL:0000031,1.52e-10,33;CL:0000404,1.52e-10,33;CL:0002610,7.10e-09,3;CL:0002613,7.76e-09,3;CL:0002614,8.49e-09,3;CL:0000393,8.53e-09,39;CL:0000211,8.53e-09,39;CL:0000120,1.89e-08,3;CL:0002319,6.73e-08,43;CL:0000221,1.06e-07,44;CL:0000133,1.06e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.19e-18!63;UBERON:0002346!1.97e-17!71;UBERON:0003075!1.97e-17!71;UBERON:0007284!1.97e-17!71;UBERON:0003056!1.56e-16!49;UBERON:0001049!5.25e-16!52;UBERON:0005068!5.25e-16!52;UBERON:0006241!5.25e-16!52;UBERON:0007135!5.25e-16!52;UBERON:0001017!8.43e-16!73;UBERON:0005743!8.43e-16!73;UBERON:0000955!1.34e-15!50;UBERON:0006238!1.34e-15!50;UBERON:0000073!4.88e-15!75;UBERON:0001016!4.88e-15!75;UBERON:0002616!1.07e-14!49;UBERON:0004121!1.15e-14!102;UBERON:0000924!1.15e-14!102;UBERON:0006601!1.15e-14!102;UBERON:0003080!1.90e-12!40;UBERON:0002020!3.37e-12!34;UBERON:0002780!1.56e-11!39;UBERON:0001890!1.56e-11!39;UBERON:0006240!1.56e-11!39;UBERON:0002420!1.63e-10!8;UBERON:0007245!1.63e-10!8;UBERON:0010009!1.63e-10!8;UBERON:0010011!1.63e-10!8;UBERON:0000454!1.63e-10!8;UBERON:0007811!7.26e-10!86;UBERON:0000153!2.33e-09!94;UBERON:0002791!7.90e-09!29;UBERON:0003528!7.90e-09!29;UBERON:0001893!7.90e-09!29;UBERON:0000369!4.30e-07!5;UBERON:0002435!4.30e-07!5;UBERON:0000204!4.30e-07!5;UBERON:0010082!4.30e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.87e-18,8;UBERON:0007245,1.87e-18,8;UBERON:0010009,1.87e-18,8;UBERON:0010011,1.87e-18,8;UBERON:0000454,1.87e-18,8;UBERON:0000073,3.74e-17,54;UBERON:0003080,9.80e-17,40;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0002616,2.21e-14,46;UBERON:0002780,3.84e-14,39;UBERON:0001890,3.84e-14,39;UBERON:0006240,3.84e-14,39;UBERON:0000955,4.78e-14,47;UBERON:0006238,4.78e-14,47;UBERON:0002950,6.99e-14,4;UBERON:0001891,6.99e-14,4;UBERON:0009616,6.99e-14,4;UBERON:0010286,6.99e-14,4;UBERON:0003056,2.03e-13,49;UBERON:0001049,1.44e-12,52;UBERON:0005068,1.44e-12,52;UBERON:0006241,1.44e-12,52;UBERON:0007135,1.44e-12,52;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0000369,2.72e-11,5;UBERON:0002435,2.72e-11,5;UBERON:0000204,2.72e-11,5;UBERON:0010082,2.72e-11,5;UBERON:0002346,5.95e-10,64;UBERON:0003075,5.95e-10,64;UBERON:0007284,5.95e-10,64;UBERON:0003528,1.50e-09,29;UBERON:0002791,1.50e-09,29;UBERON:0001893,1.50e-09,29;UBERON:0004684,7.10e-09,3;UBERON:0002275,7.10e-09,3;UBERON:0002038,8.49e-09,3;UBERON:0009663,8.49e-09,3;UBERON:0009661,8.49e-09,3;UBERON:0000125,8.49e-09,3;UBERON:0002308,8.49e-09,3;UBERON:0010371,1.50e-08,73;UBERON:0002020,4.73e-08,34;UBERON:0002259,3.20e-07,1;UBERON:0002314,3.20e-07,1;UBERON:0004061,3.20e-07,1;UBERON:0006777,3.20e-07,1;UBERON:0005882,3.20e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.383381884072945,0,2.20231761998777,0.766124028511126,1.0752457327937,3.03338461779446,0.548925861614458,1.04182674111352,1.3959149950069,1.68828783009504,0.916789486660861,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.915001205637253,1.50785222535437,0.869121600961382,0.767146371990992,1.45451631191692,1.78465389374533,0,0,0,0,0.650602214813519,0.459804208866946,0.900310649026746,0,0.544291993210623,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44048875225048,0.776152102696527,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,1.89038500578056,0,0,2.02506750069542,0,0.4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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:118392294..118392303,+ | |||
|id=chr12:118392294..118392303,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.53e-13!23;CL:0000337!1.53e-13!23;CL:0000540!1.03e-07!33;CL:0000047!1.03e-07!33;CL:0000031!1.03e-07!33;CL:0000404!1.03e-07!33;CL:0002319!4.44e-07!43;CL:0000221!8.78e-07!44;CL:0000133!8.78e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.79e-15,23;CL:0000337,1.79e-15,23;CL:0000540,1.52e-10,33;CL:0000047,1.52e-10,33;CL:0000031,1.52e-10,33;CL:0000404,1.52e-10,33;CL:0002610,7.10e-09,3;CL:0002613,7.76e-09,3;CL:0002614,8.49e-09,3;CL:0000393,8.53e-09,39;CL:0000211,8.53e-09,39;CL:0000120,1.89e-08,3;CL:0002319,6.73e-08,43;CL:0000221,1.06e-07,44;CL:0000133,1.06e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.19e-18!63;UBERON:0002346!1.97e-17!71;UBERON:0003075!1.97e-17!71;UBERON:0007284!1.97e-17!71;UBERON:0003056!1.56e-16!49;UBERON:0001049!5.25e-16!52;UBERON:0005068!5.25e-16!52;UBERON:0006241!5.25e-16!52;UBERON:0007135!5.25e-16!52;UBERON:0001017!8.43e-16!73;UBERON:0005743!8.43e-16!73;UBERON:0000955!1.34e-15!50;UBERON:0006238!1.34e-15!50;UBERON:0000073!4.88e-15!75;UBERON:0001016!4.88e-15!75;UBERON:0002616!1.07e-14!49;UBERON:0004121!1.15e-14!102;UBERON:0000924!1.15e-14!102;UBERON:0006601!1.15e-14!102;UBERON:0003080!1.90e-12!40;UBERON:0002020!3.37e-12!34;UBERON:0002780!1.56e-11!39;UBERON:0001890!1.56e-11!39;UBERON:0006240!1.56e-11!39;UBERON:0002420!1.63e-10!8;UBERON:0007245!1.63e-10!8;UBERON:0010009!1.63e-10!8;UBERON:0010011!1.63e-10!8;UBERON:0000454!1.63e-10!8;UBERON:0007811!7.26e-10!86;UBERON:0000153!2.33e-09!94;UBERON:0002791!7.90e-09!29;UBERON:0003528!7.90e-09!29;UBERON:0001893!7.90e-09!29;UBERON:0000369!4.30e-07!5;UBERON:0002435!4.30e-07!5;UBERON:0000204!4.30e-07!5;UBERON:0010082!4.30e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.87e-18,8;UBERON:0007245,1.87e-18,8;UBERON:0010009,1.87e-18,8;UBERON:0010011,1.87e-18,8;UBERON:0000454,1.87e-18,8;UBERON:0000073,3.74e-17,54;UBERON:0003080,9.80e-17,40;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0002616,2.21e-14,46;UBERON:0002780,3.84e-14,39;UBERON:0001890,3.84e-14,39;UBERON:0006240,3.84e-14,39;UBERON:0000955,4.78e-14,47;UBERON:0006238,4.78e-14,47;UBERON:0002950,6.99e-14,4;UBERON:0001891,6.99e-14,4;UBERON:0009616,6.99e-14,4;UBERON:0010286,6.99e-14,4;UBERON:0003056,2.03e-13,49;UBERON:0001049,1.44e-12,52;UBERON:0005068,1.44e-12,52;UBERON:0006241,1.44e-12,52;UBERON:0007135,1.44e-12,52;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0000369,2.72e-11,5;UBERON:0002435,2.72e-11,5;UBERON:0000204,2.72e-11,5;UBERON:0010082,2.72e-11,5;UBERON:0002346,5.95e-10,64;UBERON:0003075,5.95e-10,64;UBERON:0007284,5.95e-10,64;UBERON:0003528,1.50e-09,29;UBERON:0002791,1.50e-09,29;UBERON:0001893,1.50e-09,29;UBERON:0004684,7.10e-09,3;UBERON:0002275,7.10e-09,3;UBERON:0002038,8.49e-09,3;UBERON:0009663,8.49e-09,3;UBERON:0009661,8.49e-09,3;UBERON:0000125,8.49e-09,3;UBERON:0002308,8.49e-09,3;UBERON:0010371,1.50e-08,73;UBERON:0002020,4.73e-08,34;UBERON:0002259,3.20e-07,1;UBERON:0002314,3.20e-07,1;UBERON:0004061,3.20e-07,1;UBERON:0006777,3.20e-07,1;UBERON:0005882,3.20e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.383381884072945,0,2.20231761998777,0.766124028511126,1.0752457327937,3.03338461779446,0.548925861614458,1.04182674111352,1.3959149950069,1.68828783009504,0.916789486660861,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.915001205637253,1.50785222535437,0.869121600961382,0.767146371990992,1.45451631191692,1.78465389374533,0,0,0,0,0.650602214813519,0.459804208866946,0.900310649026746,0,0.544291993210623,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44048875225048,0.776152102696527,0.428674070063185,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,1.89038500578056,0,0,2.02506750069542,0,0.453142408984205,0,0.415149390336707,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.280924522409647,0.0640251524048693,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0.409231043169689,0,0,0.499621155875892,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr12:118392294..118392303,+ | |||
}} |
Revision as of 22:30, 12 September 2013
Short description: | p@chr12:118392294..118392303, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:118392294..118392303, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.79e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.79e-15 | 23 |
neuron | 1.52e-10 | 33 |
neuronal stem cell | 1.52e-10 | 33 |
neuroblast | 1.52e-10 | 33 |
electrically signaling cell | 1.52e-10 | 33 |
raphe nuclei neuron | 7.10e-09 | 3 |
striatum neuron | 7.76e-09 | 3 |
neuron of the substantia nigra | 8.49e-09 | 3 |
electrically responsive cell | 8.53e-09 | 39 |
electrically active cell | 8.53e-09 | 39 |
granule cell | 1.89e-08 | 3 |
neural cell | 6.73e-08 | 43 |
ectodermal cell | 1.06e-07 | 44 |
neurectodermal cell | 1.06e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.