FFCP PHASE1:Hg19::chr4:16900023..16900034,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9079|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6533|TSSclassifier=W|UniProt=|association_with_transcript=-22bp_to_ENST00000504189_5end|coexpression_cluster_id=C1083|description=CAGE_peak_7_at_LDB2_5end|id=chr4:16900023..16900034,-|ontology_enrichment_celltype=CL:0002139!5.64e-16!24;CL:0000115!7.92e-14!35;CL:0000071!2.98e-11!18;CL:0002546!2.98e-11!18;CL:0002078!2.11e-09!44;CL:0000213!8.92e-07!57;CL:0000215!8.92e-07!57|ontology_enrichment_celltype_v019=CL:0002139;1.67e-23;24!CL:0000115;1.06e-19;36!CL:0000071;5.93e-16;18!CL:0002078;8.05e-11;45!CL:0002138;2.21e-09;6!CL:0000213;3.15e-08;58!CL:0000215;3.15e-08;58!CL:1000413;5.94e-08;9|ontology_enrichment_celltype_v019_2=CL:0002139,5.96e-24,24;CL:0000115,1.01e-23,36;CL:0002078,3.41e-17,45;CL:0000071,3.37e-16,18;CL:0002546,3.37e-16,18;CL:0000213,1.85e-12,58;CL:0000215,1.85e-12,58;CL:0005020,1.33e-09,6;CL:0002138,1.33e-09,6;CL:0005022,1.33e-09,6;CL:1000413,4.32e-08,9|ontology_enrichment_development_v019=CL:0002546;5.93e-16;18!CL:0005022;2.21e-09;6!UBERON:0004872;9.84e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.72e-44!115;UBERON:0003080!1.87e-21!42;UBERON:0002780!1.26e-20!41;UBERON:0001890!1.26e-20!41;UBERON:0006240!1.26e-20!41;UBERON:0001049!8.74e-19!57;UBERON:0005068!8.74e-19!57;UBERON:0006241!8.74e-19!57;UBERON:0007135!8.74e-19!57;UBERON:0001893!2.96e-18!34;UBERON:0001017!5.81e-18!82;UBERON:0001869!1.45e-17!32;UBERON:0002791!2.08e-17!33;UBERON:0005743!3.82e-17!86;UBERON:0004111!6.38e-17!241;UBERON:0002619!1.06e-16!22;UBERON:0002616!2.40e-16!59;UBERON:0002020!2.60e-16!34;UBERON:0003528!2.60e-16!34;UBERON:0000073!5.63e-16!94;UBERON:0001016!5.63e-16!94;UBERON:0000956!8.53e-16!25;UBERON:0000203!8.53e-16!25;UBERON:0001950!9.87e-16!20;UBERON:0000955!2.45e-15!69;UBERON:0006238!2.45e-15!69;UBERON:0000477!9.73e-15!286;UBERON:0000025!3.66e-14!194;UBERON:0002346!1.04e-13!90;UBERON:0003075!2.93e-12!86;UBERON:0007284!2.93e-12!86;UBERON:0001986!2.98e-11!18;UBERON:0004638!2.98e-11!18;UBERON:0004852!2.98e-11!18;UBERON:0003056!3.44e-11!61;UBERON:0000468!1.62e-09!659;UBERON:0000487!3.14e-09!22;UBERON:0006914!4.80e-08!25;UBERON:0000924!6.56e-08!173;UBERON:0006601!6.56e-08!173;UBERON:0000153!6.71e-08!129;UBERON:0007811!6.71e-08!129;UBERON:0000467!1.98e-07!625;UBERON:0000480!2.52e-07!626;UBERON:0000033!3.27e-07!123;UBERON:0000483!4.98e-07!309;UBERON:0004121!5.72e-07!169;UBERON:0004872!5.95e-07!84;UBERON:0000055!6.75e-07!69;UBERON:0000200!8.77e-07!6|ontology_enrichment_uberon_v019=UBERON:0001950;9.26e-20;20!UBERON:0002619;1.32e-19;22!UBERON:0000956;1.25e-16;25!UBERON:0000203;1.25e-16;25!UBERON:0004638;5.93e-16;18!UBERON:0001986;5.93e-16;18!UBERON:0004852;5.93e-16;18!UBERON:0000487;8.07e-14;22!UBERON:0001869;1.68e-13;32!UBERON:0001893;3.53e-12;34!UBERON:0002791;9.42e-12;32!UBERON:0006914;1.37e-11;25!UBERON:0003528;3.80e-11;34!UBERON:0002020;3.80e-11;34!UBERON:0000200;2.97e-10;6!UBERON:0007023;4.72e-10;114!UBERON:0002021;9.43e-09;5!UBERON:0002780;2.16e-08;41!UBERON:0001890;2.16e-08;41!UBERON:0003915;5.94e-08;9!UBERON:0004700;5.94e-08;9!UBERON:0001917;5.94e-08;9!UBERON:0000490;4.19e-07;33!UBERON:0001473;9.24e-07;8!UBERON:0004536;9.24e-07;8!UBERON:0006558;9.24e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.90e-42,114;UBERON:0001950,1.06e-19,20;UBERON:0002619,1.46e-19,22;UBERON:0000956,1.36e-16,25;UBERON:0000203,1.36e-16,25;UBERON:0004638,3.37e-16,18;UBERON:0001986,3.37e-16,18;UBERON:0004852,3.37e-16,18;UBERON:0001869,3.71e-15,32;UBERON:0004111,6.69e-15,240;UBERON:0000487,4.54e-14,22;UBERON:0001893,6.51e-14,34;UBERON:0002791,2.21e-13,32;UBERON:0002780,5.63e-13,41;UBERON:0001890,5.63e-13,41;UBERON:0003080,5.63e-13,41;UBERON:0006240,5.63e-13,41;UBERON:0000025,9.14e-13,192;UBERON:0003528,2.87e-12,34;UBERON:0002020,2.87e-12,34;UBERON:0006914,8.38e-12,25;UBERON:0000055,1.45e-10,68;UBERON:0000200,3.14e-10,6;UBERON:0004872,9.36e-09,83;UBERON:0002021,1.07e-08,5;UBERON:0001049,1.25e-08,56;UBERON:0005068,1.25e-08,56;UBERON:0006241,1.25e-08,56;UBERON:0007135,1.25e-08,56;UBERON:0000073,1.31e-08,53;UBERON:0002616,1.31e-08,53;UBERON:0003056,3.22e-08,61;UBERON:0002049,3.49e-08,78;UBERON:0007798,3.49e-08,78;UBERON:0002346,3.57e-08,86;UBERON:0003915,4.32e-08,9;UBERON:0004700,4.32e-08,9;UBERON:0001917,4.32e-08,9;UBERON:0001017,8.21e-08,81;UBERON:0001016,1.73e-07,89;UBERON:0001009,2.74e-07,112;UBERON:0007500,3.63e-07,59;UBERON:0001981,3.63e-07,59;UBERON:0004537,3.63e-07,59;UBERON:0006965,3.63e-07,59;UBERON:0010314,4.59e-07,132;UBERON:0003075,4.69e-07,82;UBERON:0007284,4.69e-07,82;UBERON:0001473,6.45e-07,8;UBERON:0004536,6.45e-07,8;UBERON:0006558,6.45e-07,8;UBERON:0000483,7.83e-07,306;UBERON:0004876,9.39e-07,11;UBERON:0000955,9.99e-07,68;UBERON:0006238,9.99e-07,68|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9079 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6533 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000504189_5end | |||
|coexpression_cluster_id=C1083 | |||
|description=CAGE_peak_7_at_LDB2_5end | |||
|id=chr4:16900023..16900034,- | |||
|ontology_enrichment_celltype=CL:0002139!5.64e-16!24;CL:0000115!7.92e-14!35;CL:0000071!2.98e-11!18;CL:0002546!2.98e-11!18;CL:0002078!2.11e-09!44;CL:0000213!8.92e-07!57;CL:0000215!8.92e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.67e-23;24!CL:0000115;1.06e-19;36!CL:0000071;5.93e-16;18!CL:0002078;8.05e-11;45!CL:0002138;2.21e-09;6!CL:0000213;3.15e-08;58!CL:0000215;3.15e-08;58!CL:1000413;5.94e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.96e-24,24;CL:0000115,1.01e-23,36;CL:0002078,3.41e-17,45;CL:0000071,3.37e-16,18;CL:0002546,3.37e-16,18;CL:0000213,1.85e-12,58;CL:0000215,1.85e-12,58;CL:0005020,1.33e-09,6;CL:0002138,1.33e-09,6;CL:0005022,1.33e-09,6;CL:1000413,4.32e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.93e-16;18!CL:0005022;2.21e-09;6!UBERON:0004872;9.84e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;9.26e-20;20!UBERON:0002619;1.32e-19;22!UBERON:0000956;1.25e-16;25!UBERON:0000203;1.25e-16;25!UBERON:0004638;5.93e-16;18!UBERON:0001986;5.93e-16;18!UBERON:0004852;5.93e-16;18!UBERON:0000487;8.07e-14;22!UBERON:0001869;1.68e-13;32!UBERON:0001893;3.53e-12;34!UBERON:0002791;9.42e-12;32!UBERON:0006914;1.37e-11;25!UBERON:0003528;3.80e-11;34!UBERON:0002020;3.80e-11;34!UBERON:0000200;2.97e-10;6!UBERON:0007023;4.72e-10;114!UBERON:0002021;9.43e-09;5!UBERON:0002780;2.16e-08;41!UBERON:0001890;2.16e-08;41!UBERON:0003915;5.94e-08;9!UBERON:0004700;5.94e-08;9!UBERON:0001917;5.94e-08;9!UBERON:0000490;4.19e-07;33!UBERON:0001473;9.24e-07;8!UBERON:0004536;9.24e-07;8!UBERON:0006558;9.24e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.90e-42,114;UBERON:0001950,1.06e-19,20;UBERON:0002619,1.46e-19,22;UBERON:0000956,1.36e-16,25;UBERON:0000203,1.36e-16,25;UBERON:0004638,3.37e-16,18;UBERON:0001986,3.37e-16,18;UBERON:0004852,3.37e-16,18;UBERON:0001869,3.71e-15,32;UBERON:0004111,6.69e-15,240;UBERON:0000487,4.54e-14,22;UBERON:0001893,6.51e-14,34;UBERON:0002791,2.21e-13,32;UBERON:0002780,5.63e-13,41;UBERON:0001890,5.63e-13,41;UBERON:0003080,5.63e-13,41;UBERON:0006240,5.63e-13,41;UBERON:0000025,9.14e-13,192;UBERON:0003528,2.87e-12,34;UBERON:0002020,2.87e-12,34;UBERON:0006914,8.38e-12,25;UBERON:0000055,1.45e-10,68;UBERON:0000200,3.14e-10,6;UBERON:0004872,9.36e-09,83;UBERON:0002021,1.07e-08,5;UBERON:0001049,1.25e-08,56;UBERON:0005068,1.25e-08,56;UBERON:0006241,1.25e-08,56;UBERON:0007135,1.25e-08,56;UBERON:0000073,1.31e-08,53;UBERON:0002616,1.31e-08,53;UBERON:0003056,3.22e-08,61;UBERON:0002049,3.49e-08,78;UBERON:0007798,3.49e-08,78;UBERON:0002346,3.57e-08,86;UBERON:0003915,4.32e-08,9;UBERON:0004700,4.32e-08,9;UBERON:0001917,4.32e-08,9;UBERON:0001017,8.21e-08,81;UBERON:0001016,1.73e-07,89;UBERON:0001009,2.74e-07,112;UBERON:0007500,3.63e-07,59;UBERON:0001981,3.63e-07,59;UBERON:0004537,3.63e-07,59;UBERON:0006965,3.63e-07,59;UBERON:0010314,4.59e-07,132;UBERON:0003075,4.69e-07,82;UBERON:0007284,4.69e-07,82;UBERON:0001473,6.45e-07,8;UBERON:0004536,6.45e-07,8;UBERON:0006558,6.45e-07,8;UBERON:0000483,7.83e-07,306;UBERON:0004876,9.39e-07,11;UBERON:0000955,9.99e-07,68;UBERON:0006238,9.99e-07,68 | |||
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| |||
|short_description=p7@LDB2 | |||
}} |
Revision as of 03:15, 13 September 2013
Short description: | p7@LDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LDB2_5end |
Coexpression cluster: | C1083_lung_uterus_Endothelial_neuroectodermal_spleen_mesenchymal_occipital |
Association with transcript: | -22bp_to_ENST00000504189_5end |
EntrezGene: | LDB2 |
HGNC: | 6533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.96e-24 | 24 |
endothelial cell | 1.01e-23 | 36 |
meso-epithelial cell | 3.41e-17 | 45 |
blood vessel endothelial cell | 3.37e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.37e-16 | 18 |
lining cell | 1.85e-12 | 58 |
barrier cell | 1.85e-12 | 58 |
lymphangioblast | 1.33e-09 | 6 |
endothelial cell of lymphatic vessel | 1.33e-09 | 6 |
vascular lymphangioblast | 1.33e-09 | 6 |
endothelial cell of artery | 4.32e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.