FFCP PHASE1:Mm9::chr16:81624003..81624007,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:81624003..81624007,+|id=chr16:81624003..81624007,+|ontology_enrichment_celltype=CL:0000117!9.57e-08!23;CL:0000337!9.57e-08!23;CL:0000540!1.13e-07!33;CL:0000047!1.13e-07!33;CL:0000031!1.13e-07!33;CL:0000404!1.13e-07!33|ontology_enrichment_celltype_v019_2=CL:0002612,1.08e-13,3;CL:0002610,1.20e-13,3;CL:0000117,3.82e-11,23;CL:0000337,3.82e-11,23;CL:0000540,1.94e-07,33;CL:0000047,1.94e-07,33;CL:0000031,1.94e-07,33;CL:0000404,1.94e-07,33;CL:0002614,7.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.72e-19!73;UBERON:0005743!1.72e-19!73;UBERON:0002020!2.54e-19!34;UBERON:0001049!2.99e-19!52;UBERON:0005068!2.99e-19!52;UBERON:0006241!2.99e-19!52;UBERON:0007135!2.99e-19!52;UBERON:0002346!5.53e-19!71;UBERON:0003075!5.53e-19!71;UBERON:0007284!5.53e-19!71;UBERON:0000073!1.34e-18!75;UBERON:0001016!1.34e-18!75;UBERON:0000955!1.56e-17!50;UBERON:0006238!1.56e-17!50;UBERON:0000033!9.69e-17!63;UBERON:0002616!1.13e-16!49;UBERON:0004121!1.37e-16!102;UBERON:0000924!1.37e-16!102;UBERON:0006601!1.37e-16!102;UBERON:0003080!3.07e-14!40;UBERON:0002791!4.03e-14!29;UBERON:0003528!4.03e-14!29;UBERON:0001893!4.03e-14!29;UBERON:0002780!2.36e-13!39;UBERON:0001890!2.36e-13!39;UBERON:0006240!2.36e-13!39;UBERON:0002021!6.24e-13!10;UBERON:0000411!6.24e-13!10;UBERON:0001950!6.24e-13!10;UBERON:0003056!7.62e-13!49;UBERON:0002619!2.75e-10!17;UBERON:0000956!3.77e-10!21;UBERON:0001869!3.77e-10!21;UBERON:0000203!3.77e-10!21;UBERON:0007811!3.28e-09!86;UBERON:0002240!8.16e-08!6;UBERON:0005174!8.16e-08!6;UBERON:0001137!8.16e-08!6;UBERON:0000153!1.54e-07!94;UBERON:0001948!4.31e-07!5;UBERON:0002315!4.31e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.18e-33,10;UBERON:0000411,2.18e-33,10;UBERON:0001950,2.18e-33,10;UBERON:0000073,1.08e-28,54;UBERON:0002020,5.46e-26,34;UBERON:0001049,6.50e-21,52;UBERON:0005068,6.50e-21,52;UBERON:0006241,6.50e-21,52;UBERON:0007135,6.50e-21,52;UBERON:0001017,1.82e-20,73;UBERON:0001016,7.67e-20,75;UBERON:0003528,2.51e-19,29;UBERON:0002791,2.51e-19,29;UBERON:0001893,2.51e-19,29;UBERON:0002619,3.91e-19,17;UBERON:0000956,9.45e-19,21;UBERON:0001869,9.45e-19,21;UBERON:0000203,9.45e-19,21;UBERON:0002346,1.78e-16,64;UBERON:0003075,1.78e-16,64;UBERON:0007284,1.78e-16,64;UBERON:0003080,8.03e-16,40;UBERON:0002616,1.08e-15,46;UBERON:0000955,2.60e-15,47;UBERON:0006238,2.60e-15,47;UBERON:0004121,4.96e-15,95;UBERON:0000924,4.96e-15,95;UBERON:0006601,4.96e-15,95;UBERON:0010371,4.24e-14,73;UBERON:0002780,7.26e-14,39;UBERON:0001890,7.26e-14,39;UBERON:0006240,7.26e-14,39;UBERON:0002257,1.08e-13,3;UBERON:0004684,1.20e-13,3;UBERON:0002275,1.20e-13,3;UBERON:0003056,1.63e-12,49;UBERON:0010314,1.34e-10,92;UBERON:0002950,3.82e-10,4;UBERON:0001891,3.82e-10,4;UBERON:0009616,3.82e-10,4;UBERON:0010286,3.82e-10,4;UBERON:0001948,2.08e-08,5;UBERON:0002315,2.08e-08,5;UBERON:0000025,5.41e-08,114;UBERON:0004111,2.82e-07,122;UBERON:0002240,4.44e-07,6;UBERON:0005174,4.44e-07,6;UBERON:0001137,4.44e-07,6;UBERON:0002038,7.77e-07,3;UBERON:0009663,7.77e-07,3;UBERON:0009661,7.77e-07,3;UBERON:0000125,7.77e-07,3;UBERON:0002308,7.77e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.883474163806454,0.244981598429908,0,0,2.20231761998777,3.19218345212969,3.5329502648936,0,0.457438218012048,0.52091337055676,0,4.50210088025344,2.44477196442896,2.94628585473668,5.83723891276322,2.05039390407831,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0.915001205637253,0.376963056338593,1.91206752211504,3.3243009452943,0.62336413367868,0.811206315338788,0,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.642202359951168,1.40654023910644,0,0,0,0.390438744296638,0.646270193198397,0,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.71868654031819,2.92150409984269,3.42541259885321,3.7769694869485,0.675022500231806,3.15224842256954,4.07828168085784,1.55328093525546,0,0,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0,0,0,0,0|short_description=p@chr16:81624003..81624007,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:81624003..81624007,+ | |||
|id=chr16:81624003..81624007,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.57e-08!23;CL:0000337!9.57e-08!23;CL:0000540!1.13e-07!33;CL:0000047!1.13e-07!33;CL:0000031!1.13e-07!33;CL:0000404!1.13e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.08e-13,3;CL:0002610,1.20e-13,3;CL:0000117,3.82e-11,23;CL:0000337,3.82e-11,23;CL:0000540,1.94e-07,33;CL:0000047,1.94e-07,33;CL:0000031,1.94e-07,33;CL:0000404,1.94e-07,33;CL:0002614,7.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-19!73;UBERON:0005743!1.72e-19!73;UBERON:0002020!2.54e-19!34;UBERON:0001049!2.99e-19!52;UBERON:0005068!2.99e-19!52;UBERON:0006241!2.99e-19!52;UBERON:0007135!2.99e-19!52;UBERON:0002346!5.53e-19!71;UBERON:0003075!5.53e-19!71;UBERON:0007284!5.53e-19!71;UBERON:0000073!1.34e-18!75;UBERON:0001016!1.34e-18!75;UBERON:0000955!1.56e-17!50;UBERON:0006238!1.56e-17!50;UBERON:0000033!9.69e-17!63;UBERON:0002616!1.13e-16!49;UBERON:0004121!1.37e-16!102;UBERON:0000924!1.37e-16!102;UBERON:0006601!1.37e-16!102;UBERON:0003080!3.07e-14!40;UBERON:0002791!4.03e-14!29;UBERON:0003528!4.03e-14!29;UBERON:0001893!4.03e-14!29;UBERON:0002780!2.36e-13!39;UBERON:0001890!2.36e-13!39;UBERON:0006240!2.36e-13!39;UBERON:0002021!6.24e-13!10;UBERON:0000411!6.24e-13!10;UBERON:0001950!6.24e-13!10;UBERON:0003056!7.62e-13!49;UBERON:0002619!2.75e-10!17;UBERON:0000956!3.77e-10!21;UBERON:0001869!3.77e-10!21;UBERON:0000203!3.77e-10!21;UBERON:0007811!3.28e-09!86;UBERON:0002240!8.16e-08!6;UBERON:0005174!8.16e-08!6;UBERON:0001137!8.16e-08!6;UBERON:0000153!1.54e-07!94;UBERON:0001948!4.31e-07!5;UBERON:0002315!4.31e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.18e-33,10;UBERON:0000411,2.18e-33,10;UBERON:0001950,2.18e-33,10;UBERON:0000073,1.08e-28,54;UBERON:0002020,5.46e-26,34;UBERON:0001049,6.50e-21,52;UBERON:0005068,6.50e-21,52;UBERON:0006241,6.50e-21,52;UBERON:0007135,6.50e-21,52;UBERON:0001017,1.82e-20,73;UBERON:0001016,7.67e-20,75;UBERON:0003528,2.51e-19,29;UBERON:0002791,2.51e-19,29;UBERON:0001893,2.51e-19,29;UBERON:0002619,3.91e-19,17;UBERON:0000956,9.45e-19,21;UBERON:0001869,9.45e-19,21;UBERON:0000203,9.45e-19,21;UBERON:0002346,1.78e-16,64;UBERON:0003075,1.78e-16,64;UBERON:0007284,1.78e-16,64;UBERON:0003080,8.03e-16,40;UBERON:0002616,1.08e-15,46;UBERON:0000955,2.60e-15,47;UBERON:0006238,2.60e-15,47;UBERON:0004121,4.96e-15,95;UBERON:0000924,4.96e-15,95;UBERON:0006601,4.96e-15,95;UBERON:0010371,4.24e-14,73;UBERON:0002780,7.26e-14,39;UBERON:0001890,7.26e-14,39;UBERON:0006240,7.26e-14,39;UBERON:0002257,1.08e-13,3;UBERON:0004684,1.20e-13,3;UBERON:0002275,1.20e-13,3;UBERON:0003056,1.63e-12,49;UBERON:0010314,1.34e-10,92;UBERON:0002950,3.82e-10,4;UBERON:0001891,3.82e-10,4;UBERON:0009616,3.82e-10,4;UBERON:0010286,3.82e-10,4;UBERON:0001948,2.08e-08,5;UBERON:0002315,2.08e-08,5;UBERON:0000025,5.41e-08,114;UBERON:0004111,2.82e-07,122;UBERON:0002240,4.44e-07,6;UBERON:0005174,4.44e-07,6;UBERON:0001137,4.44e-07,6;UBERON:0002038,7.77e-07,3;UBERON:0009663,7.77e-07,3;UBERON:0009661,7.77e-07,3;UBERON:0000125,7.77e-07,3;UBERON:0002308,7.77e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.883474163806454,0.244981598429908,0,0,2.20231761998777,3.19218345212969,3.5329502648936,0,0.457438218012048,0.52091337055676,0,4.50210088025344,2.44477196442896,2.94628585473668,5.83723891276322,2.05039390407831,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0.915001205637253,0.376963056338593,1.91206752211504,3.3243009452943,0.62336413367868,0.811206315338788,0,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.642202359951168,1.40654023910644,0,0,0,0.390438744296638,0.646270193198397,0,0,0,0,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.71868654031819,2.92150409984269,3.42541259885321,3.7769694869485,0.675022500231806,3.15224842256954,4.07828168085784,1.55328093525546,0,0,0.170733605754134,0,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr16:81624003..81624007,+ | |||
}} |
Revision as of 13:09, 13 September 2013
Short description: | p@chr16:81624003..81624007, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:81624003..81624007, + |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.08e-13 | 3 |
raphe nuclei neuron | 1.20e-13 | 3 |
CNS neuron (sensu Vertebrata) | 3.82e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.82e-11 | 23 |
neuron | 1.94e-07 | 33 |
neuronal stem cell | 1.94e-07 | 33 |
neuroblast | 1.94e-07 | 33 |
electrically signaling cell | 1.94e-07 | 33 |
neuron of the substantia nigra | 7.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.