FFCP PHASE1:Mm9::chr16:91729647..91729680,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16443|HGNC=|MCL_coexpression_id=794|UniProt=E9Q3I8|association_with_transcript=29bp_to_ENSMUST00000113996_5end|description=CAGE_peak_3_at_Itsn1_5end|id=chr16:91729647..91729680,+|ontology_enrichment_celltype=CL:0000540!3.31e-14!33;CL:0000047!3.31e-14!33;CL:0000031!3.31e-14!33;CL:0000404!3.31e-14!33;CL:0000117!5.61e-14!23;CL:0000337!5.61e-14!23;CL:0000393!1.66e-13!39;CL:0000211!1.66e-13!39;CL:0000221!4.94e-13!44;CL:0000133!4.94e-13!44;CL:0002319!6.62e-13!43;CL:0000055!1.04e-11!50;CL:0002321!1.57e-08!70;CL:0000220!1.57e-08!70|ontology_enrichment_celltype_v019_2=CL:0000540,2.22e-14,33;CL:0000047,2.22e-14,33;CL:0000031,2.22e-14,33;CL:0000404,2.22e-14,33;CL:0000117,3.79e-14,23;CL:0000337,3.79e-14,23;CL:0000393,1.14e-13,39;CL:0000211,1.14e-13,39;CL:0000221,3.44e-13,44;CL:0000133,3.44e-13,44;CL:0002319,4.62e-13,43;CL:0002321,1.76e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000073!4.42e-26!75;UBERON:0001016!4.42e-26!75;UBERON:0004121!5.31e-24!102;UBERON:0000924!5.31e-24!102;UBERON:0006601!5.31e-24!102;UBERON:0000033!3.19e-22!63;UBERON:0001049!1.12e-21!52;UBERON:0005068!1.12e-21!52;UBERON:0006241!1.12e-21!52;UBERON:0007135!1.12e-21!52;UBERON:0002346!2.25e-21!71;UBERON:0003075!2.25e-21!71;UBERON:0007284!2.25e-21!71;UBERON:0000955!1.91e-20!50;UBERON:0006238!1.91e-20!50;UBERON:0002616!7.81e-20!49;UBERON:0003056!4.89e-19!49;UBERON:0002020!1.51e-18!34;UBERON:0003080!2.66e-16!40;UBERON:0002780!8.94e-16!39;UBERON:0001890!8.94e-16!39;UBERON:0006240!8.94e-16!39;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0000956!4.88e-11!21;UBERON:0001869!4.88e-11!21;UBERON:0000203!4.88e-11!21;UBERON:0007811!1.40e-09!86;UBERON:0000153!1.82e-09!94;UBERON:0002619!6.12e-09!17;UBERON:0000025!3.02e-08!114;UBERON:0004111!6.51e-08!122;UBERON:0002021!8.82e-07!10;UBERON:0000411!8.82e-07!10;UBERON:0001950!8.82e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.66e-28,73;UBERON:0004121,8.63e-27,95;UBERON:0000924,8.63e-27,95;UBERON:0006601,8.63e-27,95;UBERON:0001016,2.03e-26,75;UBERON:0002346,9.86e-25,64;UBERON:0003075,9.86e-25,64;UBERON:0007284,9.86e-25,64;UBERON:0010371,2.15e-23,73;UBERON:0000073,3.38e-23,54;UBERON:0001049,5.92e-22,52;UBERON:0005068,5.92e-22,52;UBERON:0006241,5.92e-22,52;UBERON:0007135,5.92e-22,52;UBERON:0010314,8.16e-20,92;UBERON:0003056,2.81e-19,49;UBERON:0000955,5.17e-19,47;UBERON:0006238,5.17e-19,47;UBERON:0002020,8.83e-19,34;UBERON:0002616,2.10e-18,46;UBERON:0003080,1.67e-16,40;UBERON:0002780,5.71e-16,39;UBERON:0001890,5.71e-16,39;UBERON:0006240,5.71e-16,39;UBERON:0003528,8.40e-16,29;UBERON:0002791,8.40e-16,29;UBERON:0001893,8.40e-16,29;UBERON:0000956,3.62e-11,21;UBERON:0001869,3.62e-11,21;UBERON:0000203,3.62e-11,21;UBERON:0002619,4.84e-09,17;UBERON:0000025,1.64e-07,114;UBERON:0004111,2.84e-07,122;UBERON:0002021,7.47e-07,10;UBERON:0000411,7.47e-07,10;UBERON:0001950,7.47e-07,10|phase1_expression=4.64431656603902,0,0.909998478779072,1.81478526784098,4.00716583957078,1.17515490338323,1.40167584357315,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,3.74190476664707,1.09220046320974,1.04479915655574,1.11994695955385,0.91763712426868,0,0.430761996159075,0.215471232685889,1.33016393619462,1.00812051903972,0.443461021310609,0,0.61506478758457,0,2.3108129580102,1.49611180822643,2.24586291888606,0,0,0,0,0,0,2.64383317748712,2.53442328048786,3.30384153891027,3.12956537739216,2.61630187656536,2.41654801007919,3.11087838518853,3.07970127575798,2.87505128729943,0.167782606057736,0,0,2.82985379639542,2.86533439938757,2.06268836910977,9.1042407386819,5.81890077199236,9.50747105259269,0.338844532069132,1.77858959222228,1.3498495759221,5.93319817540185,2.1314403448383,2.99600110518405,5.37905627450176,7.77672092313582,11.0704869431986,8.41299845405528,9.71213346972932,5.96345060569357,8.57435594504678,7.3801012684042,14.7075005857603,8.8092704799511,7.78892762319645,7.52672012955593,11.6059933202571,10.8870295886867,6.77187381723788,9.21303896704557,10.6924895906019,7.94550888439413,10.9012576625257,9.39653093274079,8.57437450796383,1.13589289999776,1.20914496170857,4.63783181922684,0,2.719885334831,0.539703191637817,0.649776417447669,0.448026887097336,3.23022166303029,4.4311883870295,3.11743205523443,3.5333957451034,3.52108549441701,11.5493829672886,12.7402619853323,28.4426681261332,0.649473123033642,0.253359865475099,0,1.37020655662872,0.517875767294343,1.92974780784272,1.56136794089522,1.21786191324856,1.84492397804847,0.753613202763113,3.29248379979973,1.63366568728578,1.73036477414062,1.73519228303894,0,1.61766849947409,1.54589062922275,0.969750506270444,0,13.7606974595427,11.51956887474,2.29911349687732,0.479260498023681,0,0.635351135365324,7.78911324905078,6.40500843946077,9.80103946480342,7.12679712788333,7.41574826257959,7.89594569326328,8.11206315338788,3.86989582631202,1.61729061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| ||
|EntrezGene=16443 | |||
|HGNC= | |||
|MCL_coexpression_id=794 | |||
|UniProt=E9Q3I8 | |||
|association_with_transcript=29bp_to_ENSMUST00000113996_5end | |||
|description=CAGE_peak_3_at_Itsn1_5end | |||
|id=chr16:91729647..91729680,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.31e-14!33;CL:0000047!3.31e-14!33;CL:0000031!3.31e-14!33;CL:0000404!3.31e-14!33;CL:0000117!5.61e-14!23;CL:0000337!5.61e-14!23;CL:0000393!1.66e-13!39;CL:0000211!1.66e-13!39;CL:0000221!4.94e-13!44;CL:0000133!4.94e-13!44;CL:0002319!6.62e-13!43;CL:0000055!1.04e-11!50;CL:0002321!1.57e-08!70;CL:0000220!1.57e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.22e-14,33;CL:0000047,2.22e-14,33;CL:0000031,2.22e-14,33;CL:0000404,2.22e-14,33;CL:0000117,3.79e-14,23;CL:0000337,3.79e-14,23;CL:0000393,1.14e-13,39;CL:0000211,1.14e-13,39;CL:0000221,3.44e-13,44;CL:0000133,3.44e-13,44;CL:0002319,4.62e-13,43;CL:0002321,1.76e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000073!4.42e-26!75;UBERON:0001016!4.42e-26!75;UBERON:0004121!5.31e-24!102;UBERON:0000924!5.31e-24!102;UBERON:0006601!5.31e-24!102;UBERON:0000033!3.19e-22!63;UBERON:0001049!1.12e-21!52;UBERON:0005068!1.12e-21!52;UBERON:0006241!1.12e-21!52;UBERON:0007135!1.12e-21!52;UBERON:0002346!2.25e-21!71;UBERON:0003075!2.25e-21!71;UBERON:0007284!2.25e-21!71;UBERON:0000955!1.91e-20!50;UBERON:0006238!1.91e-20!50;UBERON:0002616!7.81e-20!49;UBERON:0003056!4.89e-19!49;UBERON:0002020!1.51e-18!34;UBERON:0003080!2.66e-16!40;UBERON:0002780!8.94e-16!39;UBERON:0001890!8.94e-16!39;UBERON:0006240!8.94e-16!39;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0000956!4.88e-11!21;UBERON:0001869!4.88e-11!21;UBERON:0000203!4.88e-11!21;UBERON:0007811!1.40e-09!86;UBERON:0000153!1.82e-09!94;UBERON:0002619!6.12e-09!17;UBERON:0000025!3.02e-08!114;UBERON:0004111!6.51e-08!122;UBERON:0002021!8.82e-07!10;UBERON:0000411!8.82e-07!10;UBERON:0001950!8.82e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.66e-28,73;UBERON:0004121,8.63e-27,95;UBERON:0000924,8.63e-27,95;UBERON:0006601,8.63e-27,95;UBERON:0001016,2.03e-26,75;UBERON:0002346,9.86e-25,64;UBERON:0003075,9.86e-25,64;UBERON:0007284,9.86e-25,64;UBERON:0010371,2.15e-23,73;UBERON:0000073,3.38e-23,54;UBERON:0001049,5.92e-22,52;UBERON:0005068,5.92e-22,52;UBERON:0006241,5.92e-22,52;UBERON:0007135,5.92e-22,52;UBERON:0010314,8.16e-20,92;UBERON:0003056,2.81e-19,49;UBERON:0000955,5.17e-19,47;UBERON:0006238,5.17e-19,47;UBERON:0002020,8.83e-19,34;UBERON:0002616,2.10e-18,46;UBERON:0003080,1.67e-16,40;UBERON:0002780,5.71e-16,39;UBERON:0001890,5.71e-16,39;UBERON:0006240,5.71e-16,39;UBERON:0003528,8.40e-16,29;UBERON:0002791,8.40e-16,29;UBERON:0001893,8.40e-16,29;UBERON:0000956,3.62e-11,21;UBERON:0001869,3.62e-11,21;UBERON:0000203,3.62e-11,21;UBERON:0002619,4.84e-09,17;UBERON:0000025,1.64e-07,114;UBERON:0004111,2.84e-07,122;UBERON:0002021,7.47e-07,10;UBERON:0000411,7.47e-07,10;UBERON:0001950,7.47e-07,10 | |||
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| |||
|short_description=p3@Itsn1 | |||
}} |
Revision as of 13:19, 13 September 2013
Short description: | p3@Itsn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Itsn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:794 |
Association with transcript: | 29bp_to_ENSMUST00000113996_5end |
EntrezGene: | Itsn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.22e-14 | 33 |
neuronal stem cell | 2.22e-14 | 33 |
neuroblast | 2.22e-14 | 33 |
electrically signaling cell | 2.22e-14 | 33 |
CNS neuron (sensu Vertebrata) | 3.79e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.79e-14 | 23 |
electrically responsive cell | 1.14e-13 | 39 |
electrically active cell | 1.14e-13 | 39 |
ectodermal cell | 3.44e-13 | 44 |
neurectodermal cell | 3.44e-13 | 44 |
neural cell | 4.62e-13 | 43 |
embryonic cell | 1.76e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.