FFCP PHASE1:Mm9::chr17:49432065..49432075,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=3103|UniProt=|association_with_transcript=0bp_to_ENSMUST00000082607_5end|description=CAGE_peak_1_at_ENSMUST00000082607_5end|id=chr17:49432065..49432075,+|ontology_enrichment_celltype=CL:0000548!9.35e-31!115;CL:0000004!9.35e-31!115;CL:0000255!9.35e-31!115;CL:0002319!4.89e-30!43;CL:0000055!1.14e-29!50;CL:0002371!1.79e-29!118;CL:0000221!4.57e-29!44;CL:0000133!4.57e-29!44;CL:0000144!2.97e-28!121;CL:0000012!2.97e-28!121;CL:0002321!3.26e-28!70;CL:0000220!3.26e-28!70;CL:0000723!4.60e-28!91;CL:0000048!4.60e-28!91;CL:0000034!2.17e-27!97;CL:0000393!3.00e-26!39;CL:0000211!3.00e-26!39;CL:0000540!4.78e-26!33;CL:0000047!4.78e-26!33;CL:0000031!4.78e-26!33;CL:0000404!4.78e-26!33;CL:0000117!1.91e-22!23;CL:0000337!1.91e-22!23;CL:0000219!2.36e-09!54;CL:0002320!2.67e-07!46;CL:0000134!2.67e-07!46;CL:0002453!7.87e-07!8|ontology_enrichment_celltype_v019_2=CL:0000723,2.64e-16,91;CL:0000048,2.64e-16,91;CL:0000117,5.58e-15,23;CL:0000337,5.58e-15,23;CL:0000034,6.82e-15,97;CL:0002321,1.42e-14,70;CL:0002319,1.59e-12,43;CL:0000393,3.60e-12,39;CL:0000211,3.60e-12,39;CL:0000221,3.76e-12,44;CL:0000133,3.76e-12,44;CL:0002194,1.29e-09,4;CL:0000766,1.29e-09,4;CL:0000234,1.29e-09,4;CL:0000576,1.29e-09,4;CL:0000235,1.29e-09,4;CL:0000864,1.29e-09,4;CL:0002009,1.29e-09,4;CL:0000040,1.29e-09,4;CL:0000559,1.29e-09,4;CL:0000540,1.40e-09,33;CL:0000047,1.40e-09,33;CL:0000031,1.40e-09,33;CL:0000404,1.40e-09,33;CL:0002092,8.08e-09,3;CL:0002540,8.08e-09,3;CL:0000182,5.21e-08,5;CL:0002614,5.53e-08,3;CL:0002494,1.18e-07,3;CL:0000737,1.18e-07,3;CL:0000746,1.18e-07,3;CL:0000513,1.18e-07,3;CL:0000219,5.24e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.11e-27!73;UBERON:0005743!2.11e-27!73;UBERON:0000073!2.98e-26!75;UBERON:0001016!2.98e-26!75;UBERON:0002020!1.38e-20!34;UBERON:0004121!5.03e-16!102;UBERON:0000924!5.03e-16!102;UBERON:0006601!5.03e-16!102;UBERON:0002791!8.57e-16!29;UBERON:0003528!8.57e-16!29;UBERON:0001893!8.57e-16!29;UBERON:0001049!3.86e-13!52;UBERON:0005068!3.86e-13!52;UBERON:0006241!3.86e-13!52;UBERON:0007135!3.86e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002616!4.86e-12!49;UBERON:0000956!4.98e-12!21;UBERON:0001869!4.98e-12!21;UBERON:0000203!4.98e-12!21;UBERON:0003080!2.23e-11!40;UBERON:0002780!6.45e-11!39;UBERON:0001890!6.45e-11!39;UBERON:0006240!6.45e-11!39;UBERON:0002619!9.41e-11!17;UBERON:0002346!4.13e-10!71;UBERON:0003075!4.13e-10!71;UBERON:0007284!4.13e-10!71;UBERON:0000033!7.33e-09!63;UBERON:0003056!1.12e-08!49;UBERON:0002021!1.25e-08!10;UBERON:0000411!1.25e-08!10;UBERON:0001950!1.25e-08!10;UBERON:0002384!2.67e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.86e-14,34;UBERON:0001017,2.26e-12,73;UBERON:0001016,6.69e-12,75;UBERON:0003528,3.43e-11,29;UBERON:0002791,3.43e-11,29;UBERON:0001893,3.43e-11,29;UBERON:0000073,2.50e-10,54;UBERON:0004121,2.71e-08,95;UBERON:0000924,2.71e-08,95;UBERON:0006601,2.71e-08,95;UBERON:0001049,3.27e-08,52;UBERON:0005068,3.27e-08,52;UBERON:0006241,3.27e-08,52;UBERON:0007135,3.27e-08,52;UBERON:0002021,4.10e-08,10;UBERON:0000411,4.10e-08,10;UBERON:0001950,4.10e-08,10;UBERON:0002038,5.53e-08,3;UBERON:0009663,5.53e-08,3;UBERON:0009661,5.53e-08,3;UBERON:0000125,5.53e-08,3;UBERON:0002308,5.53e-08,3;UBERON:0002619,5.69e-08,17;UBERON:0002780,1.29e-07,39;UBERON:0001890,1.29e-07,39;UBERON:0006240,1.29e-07,39;UBERON:0003080,2.34e-07,40;UBERON:0002420,4.78e-07,8;UBERON:0007245,4.78e-07,8;UBERON:0010009,4.78e-07,8;UBERON:0010011,4.78e-07,8;UBERON:0000454,4.78e-07,8;UBERON:0002371,9.55e-07,16|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0.666219523631325,0,0.699561878128147,0.157731082679119,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,7.62036808151557,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,2.52758868796568,0.979904951377538,2.87505128729943,0,0.725362142011344,0,1.02903774414379,1.71920063963254,3.09403255366465,1.41621522601718,4.23192783417626,0.633831403506179,0.338844532069132,0.889294796111139,2.6996991518442,12.8552627133707,7.104801149461,4.19440154725767,1.53687322128622,0.414758449233911,0.810035629990144,0.630974884054146,0.856952953211411,1.54607978666129,0.61245399607477,0.287536413054709,3.67687514644008,4.40463523997555,0.638436690425939,1.38245879930619,1.31886287730194,0.274462930807229,1.04182674111352,1.67509799400829,5.06486349028512,1.37518422999129,6.48182888042069,0.996601765593721,1.1183966749518,0,0,0,0,1.3599426674155,8.09554787456726,1.29955283489534,3.13618820968135,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0.238968797952552,0.445597348164788,0,0.404810701674894,0.876767573733936,0.790575555893047,0.321321316421807,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,1.71868654031819,1.3748254587495,2.74033007908257,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000082607}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=3103 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000082607_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000082607_5end | |||
|id=chr17:49432065..49432075,+ | |||
|ontology_enrichment_celltype=CL:0000548!9.35e-31!115;CL:0000004!9.35e-31!115;CL:0000255!9.35e-31!115;CL:0002319!4.89e-30!43;CL:0000055!1.14e-29!50;CL:0002371!1.79e-29!118;CL:0000221!4.57e-29!44;CL:0000133!4.57e-29!44;CL:0000144!2.97e-28!121;CL:0000012!2.97e-28!121;CL:0002321!3.26e-28!70;CL:0000220!3.26e-28!70;CL:0000723!4.60e-28!91;CL:0000048!4.60e-28!91;CL:0000034!2.17e-27!97;CL:0000393!3.00e-26!39;CL:0000211!3.00e-26!39;CL:0000540!4.78e-26!33;CL:0000047!4.78e-26!33;CL:0000031!4.78e-26!33;CL:0000404!4.78e-26!33;CL:0000117!1.91e-22!23;CL:0000337!1.91e-22!23;CL:0000219!2.36e-09!54;CL:0002320!2.67e-07!46;CL:0000134!2.67e-07!46;CL:0002453!7.87e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.64e-16,91;CL:0000048,2.64e-16,91;CL:0000117,5.58e-15,23;CL:0000337,5.58e-15,23;CL:0000034,6.82e-15,97;CL:0002321,1.42e-14,70;CL:0002319,1.59e-12,43;CL:0000393,3.60e-12,39;CL:0000211,3.60e-12,39;CL:0000221,3.76e-12,44;CL:0000133,3.76e-12,44;CL:0002194,1.29e-09,4;CL:0000766,1.29e-09,4;CL:0000234,1.29e-09,4;CL:0000576,1.29e-09,4;CL:0000235,1.29e-09,4;CL:0000864,1.29e-09,4;CL:0002009,1.29e-09,4;CL:0000040,1.29e-09,4;CL:0000559,1.29e-09,4;CL:0000540,1.40e-09,33;CL:0000047,1.40e-09,33;CL:0000031,1.40e-09,33;CL:0000404,1.40e-09,33;CL:0002092,8.08e-09,3;CL:0002540,8.08e-09,3;CL:0000182,5.21e-08,5;CL:0002614,5.53e-08,3;CL:0002494,1.18e-07,3;CL:0000737,1.18e-07,3;CL:0000746,1.18e-07,3;CL:0000513,1.18e-07,3;CL:0000219,5.24e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.11e-27!73;UBERON:0005743!2.11e-27!73;UBERON:0000073!2.98e-26!75;UBERON:0001016!2.98e-26!75;UBERON:0002020!1.38e-20!34;UBERON:0004121!5.03e-16!102;UBERON:0000924!5.03e-16!102;UBERON:0006601!5.03e-16!102;UBERON:0002791!8.57e-16!29;UBERON:0003528!8.57e-16!29;UBERON:0001893!8.57e-16!29;UBERON:0001049!3.86e-13!52;UBERON:0005068!3.86e-13!52;UBERON:0006241!3.86e-13!52;UBERON:0007135!3.86e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002616!4.86e-12!49;UBERON:0000956!4.98e-12!21;UBERON:0001869!4.98e-12!21;UBERON:0000203!4.98e-12!21;UBERON:0003080!2.23e-11!40;UBERON:0002780!6.45e-11!39;UBERON:0001890!6.45e-11!39;UBERON:0006240!6.45e-11!39;UBERON:0002619!9.41e-11!17;UBERON:0002346!4.13e-10!71;UBERON:0003075!4.13e-10!71;UBERON:0007284!4.13e-10!71;UBERON:0000033!7.33e-09!63;UBERON:0003056!1.12e-08!49;UBERON:0002021!1.25e-08!10;UBERON:0000411!1.25e-08!10;UBERON:0001950!1.25e-08!10;UBERON:0002384!2.67e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.86e-14,34;UBERON:0001017,2.26e-12,73;UBERON:0001016,6.69e-12,75;UBERON:0003528,3.43e-11,29;UBERON:0002791,3.43e-11,29;UBERON:0001893,3.43e-11,29;UBERON:0000073,2.50e-10,54;UBERON:0004121,2.71e-08,95;UBERON:0000924,2.71e-08,95;UBERON:0006601,2.71e-08,95;UBERON:0001049,3.27e-08,52;UBERON:0005068,3.27e-08,52;UBERON:0006241,3.27e-08,52;UBERON:0007135,3.27e-08,52;UBERON:0002021,4.10e-08,10;UBERON:0000411,4.10e-08,10;UBERON:0001950,4.10e-08,10;UBERON:0002038,5.53e-08,3;UBERON:0009663,5.53e-08,3;UBERON:0009661,5.53e-08,3;UBERON:0000125,5.53e-08,3;UBERON:0002308,5.53e-08,3;UBERON:0002619,5.69e-08,17;UBERON:0002780,1.29e-07,39;UBERON:0001890,1.29e-07,39;UBERON:0006240,1.29e-07,39;UBERON:0003080,2.34e-07,40;UBERON:0002420,4.78e-07,8;UBERON:0007245,4.78e-07,8;UBERON:0010009,4.78e-07,8;UBERON:0010011,4.78e-07,8;UBERON:0000454,4.78e-07,8;UBERON:0002371,9.55e-07,16 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0.0874204024189974,0.666219523631325,0,0.699561878128147,0.157731082679119,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,7.62036808151557,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,2.52758868796568,0.979904951377538,2.87505128729943,0,0.725362142011344,0,1.02903774414379,1.71920063963254,3.09403255366465,1.41621522601718,4.23192783417626,0.633831403506179,0.338844532069132,0.889294796111139,2.6996991518442,12.8552627133707,7.104801149461,4.19440154725767,1.53687322128622,0.414758449233911,0.810035629990144,0.630974884054146,0.856952953211411,1.54607978666129,0.61245399607477,0.287536413054709,3.67687514644008,4.40463523997555,0.638436690425939,1.38245879930619,1.31886287730194,0.274462930807229,1.04182674111352,1.67509799400829,5.06486349028512,1.37518422999129,6.48182888042069,0.996601765593721,1.1183966749518,0,0,0,0,1.3599426674155,8.09554787456726,1.29955283489534,3.13618820968135,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0.315508219416257,0.780877488593277,0.861693590931196,0.238968797952552,0.445597348164788,0,0.404810701674894,0.876767573733936,0.790575555893047,0.321321316421807,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,1.71868654031819,1.3748254587495,2.74033007908257,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000082607 | |||
}} |
Revision as of 14:48, 13 September 2013
Short description: | p1@ENSMUST00000082607 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082607_5end |
Coexpression cluster: | MCL_coexpression_mm9:3103 |
Association with transcript: | 0bp_to_ENSMUST00000082607_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.64e-16 | 91 |
multi fate stem cell | 2.64e-16 | 91 |
CNS neuron (sensu Vertebrata) | 5.58e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.58e-15 | 23 |
stem cell | 6.82e-15 | 97 |
embryonic cell | 1.42e-14 | 70 |
neural cell | 1.59e-12 | 43 |
electrically responsive cell | 3.60e-12 | 39 |
electrically active cell | 3.60e-12 | 39 |
ectodermal cell | 3.76e-12 | 44 |
neurectodermal cell | 3.76e-12 | 44 |
monopoietic cell | 1.29e-09 | 4 |
myeloid leukocyte | 1.29e-09 | 4 |
phagocyte | 1.29e-09 | 4 |
monocyte | 1.29e-09 | 4 |
macrophage | 1.29e-09 | 4 |
tissue-resident macrophage | 1.29e-09 | 4 |
macrophage dendritic cell progenitor | 1.29e-09 | 4 |
monoblast | 1.29e-09 | 4 |
promonocyte | 1.29e-09 | 4 |
neuron | 1.40e-09 | 33 |
neuronal stem cell | 1.40e-09 | 33 |
neuroblast | 1.40e-09 | 33 |
electrically signaling cell | 1.40e-09 | 33 |
bone marrow cell | 8.08e-09 | 3 |
mesenchymal stem cell of the bone marrow | 8.08e-09 | 3 |
hepatocyte | 5.21e-08 | 5 |
neuron of the substantia nigra | 5.53e-08 | 3 |
cardiocyte | 1.18e-07 | 3 |
striated muscle cell | 1.18e-07 | 3 |
cardiac muscle cell | 1.18e-07 | 3 |
cardiac muscle myoblast | 1.18e-07 | 3 |
motile cell | 5.24e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.86e-14 | 34 |
central nervous system | 2.26e-12 | 73 |
nervous system | 6.69e-12 | 75 |
brain grey matter | 3.43e-11 | 29 |
regional part of telencephalon | 3.43e-11 | 29 |
telencephalon | 3.43e-11 | 29 |
regional part of nervous system | 2.50e-10 | 54 |
ectoderm-derived structure | 2.71e-08 | 95 |
ectoderm | 2.71e-08 | 95 |
presumptive ectoderm | 2.71e-08 | 95 |
neural tube | 3.27e-08 | 52 |
neural rod | 3.27e-08 | 52 |
future spinal cord | 3.27e-08 | 52 |
neural keel | 3.27e-08 | 52 |
occipital lobe | 4.10e-08 | 10 |
visual cortex | 4.10e-08 | 10 |
neocortex | 4.10e-08 | 10 |
substantia nigra | 5.53e-08 | 3 |
telencephalic nucleus | 5.53e-08 | 3 |
midbrain nucleus | 5.53e-08 | 3 |
neural nucleus | 5.53e-08 | 3 |
nucleus of brain | 5.53e-08 | 3 |
regional part of cerebral cortex | 5.69e-08 | 17 |
regional part of forebrain | 1.29e-07 | 39 |
forebrain | 1.29e-07 | 39 |
future forebrain | 1.29e-07 | 39 |
anterior neural tube | 2.34e-07 | 40 |
basal ganglion | 4.78e-07 | 8 |
nuclear complex of neuraxis | 4.78e-07 | 8 |
aggregate regional part of brain | 4.78e-07 | 8 |
collection of basal ganglia | 4.78e-07 | 8 |
cerebral subcortex | 4.78e-07 | 8 |
bone marrow | 9.55e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.