FFCP PHASE1:Mm9::chr17:90487683..90487713,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18189|HGNC=|MCL_coexpression_id=1|UniProt=G3UWQ9|association_with_transcript=0bp_to_ENSMUST00000173917_5end|description=CAGE_peak_7_at_Nrxn1_5end|id=chr17:90487683..90487713,-|ontology_enrichment_celltype=CL:0000540!3.35e-15!33;CL:0000047!3.35e-15!33;CL:0000031!3.35e-15!33;CL:0000404!3.35e-15!33;CL:0000117!2.28e-14!23;CL:0000337!2.28e-14!23;CL:0000393!1.65e-11!39;CL:0000211!1.65e-11!39;CL:0000221!1.70e-11!44;CL:0000133!1.70e-11!44;CL:0002319!3.72e-11!43;CL:0000055!2.14e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.31e-08,23;CL:0000337,3.31e-08,23;CL:0002610,8.91e-08,3;CL:0002614,1.45e-07,3;CL:0002612,2.61e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.85e-33!75;UBERON:0001016!2.85e-33!75;UBERON:0001017!1.82e-32!73;UBERON:0005743!1.82e-32!73;UBERON:0001049!1.52e-29!52;UBERON:0005068!1.52e-29!52;UBERON:0006241!1.52e-29!52;UBERON:0007135!1.52e-29!52;UBERON:0000955!5.62e-28!50;UBERON:0006238!5.62e-28!50;UBERON:0002616!5.19e-27!49;UBERON:0000033!8.50e-26!63;UBERON:0002020!7.58e-25!34;UBERON:0004121!7.72e-25!102;UBERON:0000924!7.72e-25!102;UBERON:0006601!7.72e-25!102;UBERON:0002346!9.99e-25!71;UBERON:0003075!9.99e-25!71;UBERON:0007284!9.99e-25!71;UBERON:0003080!6.31e-22!40;UBERON:0002780!6.92e-21!39;UBERON:0001890!6.92e-21!39;UBERON:0006240!6.92e-21!39;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003056!3.45e-20!49;UBERON:0000956!1.14e-14!21;UBERON:0001869!1.14e-14!21;UBERON:0000203!1.14e-14!21;UBERON:0007811!1.30e-14!86;UBERON:0000153!4.29e-12!94;UBERON:0002021!5.05e-12!10;UBERON:0000411!5.05e-12!10;UBERON:0001950!5.05e-12!10;UBERON:0002619!1.46e-11!17;UBERON:0003076!5.44e-08!12;UBERON:0003057!5.44e-08!12;UBERON:0002298!4.95e-07!6;UBERON:0002420!5.96e-07!8;UBERON:0007245!5.96e-07!8;UBERON:0010009!5.96e-07!8;UBERON:0010011!5.96e-07!8;UBERON:0000454!5.96e-07!8;UBERON:0004111!9.39e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-41,54;UBERON:0001049,1.19e-37,52;UBERON:0005068,1.19e-37,52;UBERON:0006241,1.19e-37,52;UBERON:0007135,1.19e-37,52;UBERON:0001017,2.44e-33,73;UBERON:0001016,2.87e-32,75;UBERON:0000955,1.90e-31,47;UBERON:0006238,1.90e-31,47;UBERON:0002616,1.17e-29,46;UBERON:0002346,2.24e-29,64;UBERON:0003075,2.24e-29,64;UBERON:0007284,2.24e-29,64;UBERON:0002020,3.29e-28,34;UBERON:0002021,2.27e-25,10;UBERON:0000411,2.27e-25,10;UBERON:0001950,2.27e-25,10;UBERON:0010371,5.96e-25,73;UBERON:0004121,4.95e-24,95;UBERON:0000924,4.95e-24,95;UBERON:0006601,4.95e-24,95;UBERON:0003080,5.57e-24,40;UBERON:0003528,3.15e-22,29;UBERON:0002791,3.15e-22,29;UBERON:0001893,3.15e-22,29;UBERON:0002780,4.06e-22,39;UBERON:0001890,4.06e-22,39;UBERON:0006240,4.06e-22,39;UBERON:0002619,2.78e-20,17;UBERON:0000956,6.21e-19,21;UBERON:0001869,6.21e-19,21;UBERON:0000203,6.21e-19,21;UBERON:0003056,1.19e-18,49;UBERON:0010314,1.90e-18,92;UBERON:0003076,2.92e-14,12;UBERON:0003057,2.92e-14,12;UBERON:0000025,1.28e-13,114;UBERON:0004111,2.71e-12,122;UBERON:0002950,6.29e-10,4;UBERON:0001891,6.29e-10,4;UBERON:0009616,6.29e-10,4;UBERON:0010286,6.29e-10,4;UBERON:0002240,3.58e-09,6;UBERON:0005174,3.58e-09,6;UBERON:0001137,3.58e-09,6;UBERON:0011216,3.65e-08,194;UBERON:0004684,8.91e-08,3;UBERON:0002275,8.91e-08,3;UBERON:0002038,1.45e-07,3;UBERON:0009663,1.45e-07,3;UBERON:0009661,1.45e-07,3;UBERON:0000125,1.45e-07,3;UBERON:0002308,1.45e-07,3;UBERON:0002257,2.61e-07,3;UBERON:0001948,2.72e-07,5;UBERON:0002315,2.72e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.841299845405528,0.856952953211411,1.54607978666129,0.61245399607477,0.479227355091182,0,1.10115880999389,10.3426743849002,11.8277030607307,0.131886287730194,0.274462930807229,0.52091337055676,4.18774498502071,4.50210088025344,8.86229837105499,3.24091444021034,5.41012387036591,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,11.4184510834503,9.42510180660548,0,0,0,0,14.0803201040533,6.8625090422794,0.753926112677186,22.7709859451882,21.7358138730781,15.7918913865266,12.8170597823529,0,0,0,0,0,0,0.540186389416048,0,0.136072998302656,0.512454881139399,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.015521924568,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,5.97779601620236,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,5.78378369559253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0.441056796109924,0,0,0,0,0,0,4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| ||
|EntrezGene=18189 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=G3UWQ9 | |||
|association_with_transcript=0bp_to_ENSMUST00000173917_5end | |||
|description=CAGE_peak_7_at_Nrxn1_5end | |||
|id=chr17:90487683..90487713,- | |||
|ontology_enrichment_celltype=CL:0000540!3.35e-15!33;CL:0000047!3.35e-15!33;CL:0000031!3.35e-15!33;CL:0000404!3.35e-15!33;CL:0000117!2.28e-14!23;CL:0000337!2.28e-14!23;CL:0000393!1.65e-11!39;CL:0000211!1.65e-11!39;CL:0000221!1.70e-11!44;CL:0000133!1.70e-11!44;CL:0002319!3.72e-11!43;CL:0000055!2.14e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.31e-08,23;CL:0000337,3.31e-08,23;CL:0002610,8.91e-08,3;CL:0002614,1.45e-07,3;CL:0002612,2.61e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.85e-33!75;UBERON:0001016!2.85e-33!75;UBERON:0001017!1.82e-32!73;UBERON:0005743!1.82e-32!73;UBERON:0001049!1.52e-29!52;UBERON:0005068!1.52e-29!52;UBERON:0006241!1.52e-29!52;UBERON:0007135!1.52e-29!52;UBERON:0000955!5.62e-28!50;UBERON:0006238!5.62e-28!50;UBERON:0002616!5.19e-27!49;UBERON:0000033!8.50e-26!63;UBERON:0002020!7.58e-25!34;UBERON:0004121!7.72e-25!102;UBERON:0000924!7.72e-25!102;UBERON:0006601!7.72e-25!102;UBERON:0002346!9.99e-25!71;UBERON:0003075!9.99e-25!71;UBERON:0007284!9.99e-25!71;UBERON:0003080!6.31e-22!40;UBERON:0002780!6.92e-21!39;UBERON:0001890!6.92e-21!39;UBERON:0006240!6.92e-21!39;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003056!3.45e-20!49;UBERON:0000956!1.14e-14!21;UBERON:0001869!1.14e-14!21;UBERON:0000203!1.14e-14!21;UBERON:0007811!1.30e-14!86;UBERON:0000153!4.29e-12!94;UBERON:0002021!5.05e-12!10;UBERON:0000411!5.05e-12!10;UBERON:0001950!5.05e-12!10;UBERON:0002619!1.46e-11!17;UBERON:0003076!5.44e-08!12;UBERON:0003057!5.44e-08!12;UBERON:0002298!4.95e-07!6;UBERON:0002420!5.96e-07!8;UBERON:0007245!5.96e-07!8;UBERON:0010009!5.96e-07!8;UBERON:0010011!5.96e-07!8;UBERON:0000454!5.96e-07!8;UBERON:0004111!9.39e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-41,54;UBERON:0001049,1.19e-37,52;UBERON:0005068,1.19e-37,52;UBERON:0006241,1.19e-37,52;UBERON:0007135,1.19e-37,52;UBERON:0001017,2.44e-33,73;UBERON:0001016,2.87e-32,75;UBERON:0000955,1.90e-31,47;UBERON:0006238,1.90e-31,47;UBERON:0002616,1.17e-29,46;UBERON:0002346,2.24e-29,64;UBERON:0003075,2.24e-29,64;UBERON:0007284,2.24e-29,64;UBERON:0002020,3.29e-28,34;UBERON:0002021,2.27e-25,10;UBERON:0000411,2.27e-25,10;UBERON:0001950,2.27e-25,10;UBERON:0010371,5.96e-25,73;UBERON:0004121,4.95e-24,95;UBERON:0000924,4.95e-24,95;UBERON:0006601,4.95e-24,95;UBERON:0003080,5.57e-24,40;UBERON:0003528,3.15e-22,29;UBERON:0002791,3.15e-22,29;UBERON:0001893,3.15e-22,29;UBERON:0002780,4.06e-22,39;UBERON:0001890,4.06e-22,39;UBERON:0006240,4.06e-22,39;UBERON:0002619,2.78e-20,17;UBERON:0000956,6.21e-19,21;UBERON:0001869,6.21e-19,21;UBERON:0000203,6.21e-19,21;UBERON:0003056,1.19e-18,49;UBERON:0010314,1.90e-18,92;UBERON:0003076,2.92e-14,12;UBERON:0003057,2.92e-14,12;UBERON:0000025,1.28e-13,114;UBERON:0004111,2.71e-12,122;UBERON:0002950,6.29e-10,4;UBERON:0001891,6.29e-10,4;UBERON:0009616,6.29e-10,4;UBERON:0010286,6.29e-10,4;UBERON:0002240,3.58e-09,6;UBERON:0005174,3.58e-09,6;UBERON:0001137,3.58e-09,6;UBERON:0011216,3.65e-08,194;UBERON:0004684,8.91e-08,3;UBERON:0002275,8.91e-08,3;UBERON:0002038,1.45e-07,3;UBERON:0009663,1.45e-07,3;UBERON:0009661,1.45e-07,3;UBERON:0000125,1.45e-07,3;UBERON:0002308,1.45e-07,3;UBERON:0002257,2.61e-07,3;UBERON:0001948,2.72e-07,5;UBERON:0002315,2.72e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.841299845405528,0.856952953211411,1.54607978666129,0.61245399607477,0.479227355091182,0,1.10115880999389,10.3426743849002,11.8277030607307,0.131886287730194,0.274462930807229,0.52091337055676,4.18774498502071,4.50210088025344,8.86229837105499,3.24091444021034,5.41012387036591,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,11.4184510834503,9.42510180660548,0,0,0,0,14.0803201040533,6.8625090422794,0.753926112677186,22.7709859451882,21.7358138730781,15.7918913865266,12.8170597823529,0,0,0,0,0,0,0.540186389416048,0,0.136072998302656,0.512454881139399,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.015521924568,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,5.97779601620236,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,5.78378369559253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0.441056796109924,0,0,0,0,0,0,4.63563255026274,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,9.03602948187307,15.651058041244,12.0308057822273,9.96748457593388,26.718218271055,24.1726047164704,12.8254275044043,18.9134905354173,19.938265995305,13.9795284172991,0,0,0,0,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,0,0,0.565879024158229,0.280924522409647,0.704276676453562,0.516919220600519,0.476293691283074,0.463537303779422,0.77163688185482,0,0,0,0.70990322463735,1.43061713968393,0.872078499793971,0.282328141245992,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.689531376628944,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0 | |||
|short_description=p7@Nrxn1 | |||
}} |
Revision as of 15:38, 13 September 2013
Short description: | p7@Nrxn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Nrxn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000173917_5end |
EntrezGene: | Nrxn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.31e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.31e-08 | 23 |
raphe nuclei neuron | 8.91e-08 | 3 |
neuron of the substantia nigra | 1.45e-07 | 3 |
neuron of the ventral spinal cord | 2.61e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.