FFCP PHASE1:Mm9::chr1:91476758..91476777,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=966|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:91476758..91476777,+|id=chr1:91476758..91476777,+|ontology_enrichment_celltype=CL:0000117!1.76e-11!23;CL:0000337!1.76e-11!23;CL:0000540!2.38e-10!33;CL:0000047!2.38e-10!33;CL:0000031!2.38e-10!33;CL:0000404!2.38e-10!33;CL:0000393!2.64e-09!39;CL:0000211!2.64e-09!39;CL:0000221!5.81e-07!44;CL:0000133!5.81e-07!44;CL:0002319!6.10e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.29e-22,23;CL:0000337,2.29e-22,23;CL:0000540,5.85e-16,33;CL:0000047,5.85e-16,33;CL:0000031,5.85e-16,33;CL:0000404,5.85e-16,33;CL:0000393,2.02e-13,39;CL:0000211,2.02e-13,39;CL:0002319,1.48e-10,43;CL:0000221,3.69e-10,44;CL:0000133,3.69e-10,44;CL:0002609,1.46e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.10e-18!71;UBERON:0003075!2.10e-18!71;UBERON:0007284!2.10e-18!71;UBERON:0001017!4.05e-18!73;UBERON:0005743!4.05e-18!73;UBERON:0003056!1.87e-17!49;UBERON:0000073!2.59e-17!75;UBERON:0001016!2.59e-17!75;UBERON:0001049!3.22e-17!52;UBERON:0005068!3.22e-17!52;UBERON:0006241!3.22e-17!52;UBERON:0007135!3.22e-17!52;UBERON:0004121!2.59e-16!102;UBERON:0000924!2.59e-16!102;UBERON:0006601!2.59e-16!102;UBERON:0000033!8.35e-16!63;UBERON:0000955!3.88e-14!50;UBERON:0006238!3.88e-14!50;UBERON:0002616!7.54e-14!49;UBERON:0003080!7.99e-14!40;UBERON:0002780!3.30e-13!39;UBERON:0001890!3.30e-13!39;UBERON:0006240!3.30e-13!39;UBERON:0002020!2.48e-12!34;UBERON:0002791!1.46e-09!29;UBERON:0003528!1.46e-09!29;UBERON:0001893!1.46e-09!29;UBERON:0007811!6.42e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.06e-27,64;UBERON:0003075,3.06e-27,64;UBERON:0007284,3.06e-27,64;UBERON:0000073,2.02e-22,54;UBERON:0001049,2.08e-22,52;UBERON:0005068,2.08e-22,52;UBERON:0006241,2.08e-22,52;UBERON:0007135,2.08e-22,52;UBERON:0010371,3.41e-22,73;UBERON:0001017,5.71e-21,73;UBERON:0003056,7.22e-21,49;UBERON:0004121,1.07e-20,95;UBERON:0000924,1.07e-20,95;UBERON:0006601,1.07e-20,95;UBERON:0001016,4.66e-20,75;UBERON:0002020,5.19e-17,34;UBERON:0002616,1.45e-16,46;UBERON:0010314,1.48e-16,92;UBERON:0000955,5.15e-16,47;UBERON:0006238,5.15e-16,47;UBERON:0003080,8.92e-16,40;UBERON:0002780,8.95e-15,39;UBERON:0001890,8.95e-15,39;UBERON:0006240,8.95e-15,39;UBERON:0003528,3.48e-12,29;UBERON:0002791,3.48e-12,29;UBERON:0001893,3.48e-12,29;UBERON:0002420,6.02e-08,8;UBERON:0007245,6.02e-08,8;UBERON:0010009,6.02e-08,8;UBERON:0010011,6.02e-08,8;UBERON:0000454,6.02e-08,8;UBERON:0002240,6.95e-08,6;UBERON:0005174,6.95e-08,6;UBERON:0001137,6.95e-08,6;UBERON:0000369,1.76e-07,5;UBERON:0002435,1.76e-07,5;UBERON:0000204,1.76e-07,5;UBERON:0010082,1.76e-07,5;UBERON:0003076,2.21e-07,12;UBERON:0003057,2.21e-07,12;UBERON:0001948,7.35e-07,5;UBERON:0002315,7.35e-07,5|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,15.8481681015439,0,0,0,1.25559489221072,0,0.523523743973798,1.17646297606203,1.36609096991689,0.971020706062307,0.503587271902309,0.506884656097573,0.550640256485045,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,1.02903774414379,0,0,5.05791152148994,6.34789175126439,5.70448263155561,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,3.83651565541367,4.72520784160917,4.83747411108179,1.99955689082663,2.42955395046775,4.04219637409348,4.40889166683887,1.83843757322004,0,1.14918604276669,1.99688493233117,6.3305418110493,5.03182039813253,2.6045668527838,1.3959149950069,0,3.20876320331301,2.94628585473668,1.99320353118744,4.84638559145781,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0,0.60289056221049,0.470354828542819,0.125666591329675,0.247194967734374,0.289198713839823,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,1.46390398505774,0.628340120440365,0,0.11981512450592,0,0.127070227073065,3.89455662452539,1.83000241127451,10.0523481690292,1.04294592115366,0.767146371990992,2.28566849015516,2.43361894601636,0.407357455401265,0.124406970610093,0,0.210441855886474,1.04096354370163,3.67843367093557,1.80062129805349,1.35634336052144,3.94611695077702,3.07472928683639,4.02917415606834,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,0.828503090142008,0.703578179943289,0.720248245844059,0.473489471170421,0.787056926989615,0.308534225774757,0,0.536546802799238,0.350296027101508,0.329119699826961,0.492502392237286,0.324275238183423,0.584799949701329,1.09775057645525,0,0.420579897128254,5.55684906848136,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.775809948670503,0.701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=966 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:91476758..91476777,+ | |||
|id=chr1:91476758..91476777,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.76e-11!23;CL:0000337!1.76e-11!23;CL:0000540!2.38e-10!33;CL:0000047!2.38e-10!33;CL:0000031!2.38e-10!33;CL:0000404!2.38e-10!33;CL:0000393!2.64e-09!39;CL:0000211!2.64e-09!39;CL:0000221!5.81e-07!44;CL:0000133!5.81e-07!44;CL:0002319!6.10e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.29e-22,23;CL:0000337,2.29e-22,23;CL:0000540,5.85e-16,33;CL:0000047,5.85e-16,33;CL:0000031,5.85e-16,33;CL:0000404,5.85e-16,33;CL:0000393,2.02e-13,39;CL:0000211,2.02e-13,39;CL:0002319,1.48e-10,43;CL:0000221,3.69e-10,44;CL:0000133,3.69e-10,44;CL:0002609,1.46e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.10e-18!71;UBERON:0003075!2.10e-18!71;UBERON:0007284!2.10e-18!71;UBERON:0001017!4.05e-18!73;UBERON:0005743!4.05e-18!73;UBERON:0003056!1.87e-17!49;UBERON:0000073!2.59e-17!75;UBERON:0001016!2.59e-17!75;UBERON:0001049!3.22e-17!52;UBERON:0005068!3.22e-17!52;UBERON:0006241!3.22e-17!52;UBERON:0007135!3.22e-17!52;UBERON:0004121!2.59e-16!102;UBERON:0000924!2.59e-16!102;UBERON:0006601!2.59e-16!102;UBERON:0000033!8.35e-16!63;UBERON:0000955!3.88e-14!50;UBERON:0006238!3.88e-14!50;UBERON:0002616!7.54e-14!49;UBERON:0003080!7.99e-14!40;UBERON:0002780!3.30e-13!39;UBERON:0001890!3.30e-13!39;UBERON:0006240!3.30e-13!39;UBERON:0002020!2.48e-12!34;UBERON:0002791!1.46e-09!29;UBERON:0003528!1.46e-09!29;UBERON:0001893!1.46e-09!29;UBERON:0007811!6.42e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.06e-27,64;UBERON:0003075,3.06e-27,64;UBERON:0007284,3.06e-27,64;UBERON:0000073,2.02e-22,54;UBERON:0001049,2.08e-22,52;UBERON:0005068,2.08e-22,52;UBERON:0006241,2.08e-22,52;UBERON:0007135,2.08e-22,52;UBERON:0010371,3.41e-22,73;UBERON:0001017,5.71e-21,73;UBERON:0003056,7.22e-21,49;UBERON:0004121,1.07e-20,95;UBERON:0000924,1.07e-20,95;UBERON:0006601,1.07e-20,95;UBERON:0001016,4.66e-20,75;UBERON:0002020,5.19e-17,34;UBERON:0002616,1.45e-16,46;UBERON:0010314,1.48e-16,92;UBERON:0000955,5.15e-16,47;UBERON:0006238,5.15e-16,47;UBERON:0003080,8.92e-16,40;UBERON:0002780,8.95e-15,39;UBERON:0001890,8.95e-15,39;UBERON:0006240,8.95e-15,39;UBERON:0003528,3.48e-12,29;UBERON:0002791,3.48e-12,29;UBERON:0001893,3.48e-12,29;UBERON:0002420,6.02e-08,8;UBERON:0007245,6.02e-08,8;UBERON:0010009,6.02e-08,8;UBERON:0010011,6.02e-08,8;UBERON:0000454,6.02e-08,8;UBERON:0002240,6.95e-08,6;UBERON:0005174,6.95e-08,6;UBERON:0001137,6.95e-08,6;UBERON:0000369,1.76e-07,5;UBERON:0002435,1.76e-07,5;UBERON:0000204,1.76e-07,5;UBERON:0010082,1.76e-07,5;UBERON:0003076,2.21e-07,12;UBERON:0003057,2.21e-07,12;UBERON:0001948,7.35e-07,5;UBERON:0002315,7.35e-07,5 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,15.8481681015439,0,0,0,1.25559489221072,0,0.523523743973798,1.17646297606203,1.36609096991689,0.971020706062307,0.503587271902309,0.506884656097573,0.550640256485045,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,1.02903774414379,0,0,5.05791152148994,6.34789175126439,5.70448263155561,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,3.83651565541367,4.72520784160917,4.83747411108179,1.99955689082663,2.42955395046775,4.04219637409348,4.40889166683887,1.83843757322004,0,1.14918604276669,1.99688493233117,6.3305418110493,5.03182039813253,2.6045668527838,1.3959149950069,0,3.20876320331301,2.94628585473668,1.99320353118744,4.84638559145781,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0,0.60289056221049,0.470354828542819,0.125666591329675,0.247194967734374,0.289198713839823,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,1.46390398505774,0.628340120440365,0,0.11981512450592,0,0.127070227073065,3.89455662452539,1.83000241127451,10.0523481690292,1.04294592115366,0.767146371990992,2.28566849015516,2.43361894601636,0.407357455401265,0.124406970610093,0,0.210441855886474,1.04096354370163,3.67843367093557,1.80062129805349,1.35634336052144,3.94611695077702,3.07472928683639,4.02917415606834,0.776110112217047,0,0.567318240503458,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,0.828503090142008,0.703578179943289,0.720248245844059,0.473489471170421,0.787056926989615,0.308534225774757,0,0.536546802799238,0.350296027101508,0.329119699826961,0.492502392237286,0.324275238183423,0.584799949701329,1.09775057645525,0,0.420579897128254,5.55684906848136,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.775809948670503,0.701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0,0.345369963731791,0.289298117163023,1.50791283939272,0,0,0,1.76605648986571,2.69586879162067,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,1.07711698866399,0,0.891194696329576,1.13230612315533,0.404810701674894,0.876767573733936,0.395287777946524,0.963963949265421,0.709700426041343,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,1.70219802876894,0.900305470156551,0.776152102696527,0.643011105094777,1.77340233642274,2.14042581122485,1.31639216481697,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.322928853391811,0.301564624640779,0.596861720015682,0.164140899745061,0.291480836629851,2.41052892613663,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0,0.509935289981566,0.419854356970974,0.414599921413271,0,1.10717597753397,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0,0,0,0,1.49516546043979,0.66183396182839,0.972255941720238,0.774958940866387,1.01373675294467,1.17357238645754,0.39061315453185,0.419437377702843,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.228620419965,0.302478555410522,0.0974578807397524,0.192423683280659,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0.19318959403219,0,0.549454872801795,0,0,2.25900737046827,0.920650473014354,1.71868654031819,1.54667864109319,0.685082519770642,0,0.675022500231806,0.45032120322422,1.81256963593682,0.51776031175182,1.14166082342594,1.59609949360412,1.53660245178721,1.21553358534147,0.838452650511929,0.735374033800057,0.44449345560323,0.412070114477788,1.28367683836726,0.758091635291392,1.01391719956096,0.188626341386076,0.468207537349412,1.34452820050225,1.14870937911227,1.42888107384922,1.97003354106254,1.35036454324594,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0.238436189947321,1.16277133305863,0.470546902076653,0.592302255241736,0.73171189149109,0.789209134313529,1.22223702461276,3.36685362994643,1.18635018124174,0.788035859004508,0.409231043169689,1.39443157067369,0.964533054905707,3.2475375131933,0.467863216890817,0.644613162144895,0.57386499620653,1.10295709559758,0.231867835620421 | |||
|short_description=p@chr1:91476758..91476777,+ | |||
}} |
Revision as of 21:14, 13 September 2013
Short description: | p@chr1:91476758..91476777, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:91476758..91476777, + |
Coexpression cluster: | MCL_coexpression_mm9:966 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.29e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.29e-22 | 23 |
neuron | 5.85e-16 | 33 |
neuronal stem cell | 5.85e-16 | 33 |
neuroblast | 5.85e-16 | 33 |
electrically signaling cell | 5.85e-16 | 33 |
electrically responsive cell | 2.02e-13 | 39 |
electrically active cell | 2.02e-13 | 39 |
neural cell | 1.48e-10 | 43 |
ectodermal cell | 3.69e-10 | 44 |
neurectodermal cell | 3.69e-10 | 44 |
neuron of cerebral cortex | 1.46e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.