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FFCP PHASE1:Mm9::chr2:180332932..180332956,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12841|HGNC=|MCL_coexpression_id=2165|UniProt=A2ACT7,E9PW00,Q8BSX1|association_with_transcript=5bp_to_ENSMUST00000103059,ENSMUST00000171895,NM_009936,uc008ojl.1_5end|description=CAGE_peak_1_at_Col9a3_5end|id=chr2:180332932..180332956,+|ontology_enrichment_celltype=CL:0000221!1.47e-08!44;CL:0000133!1.47e-08!44;CL:0002319!5.16e-08!43|ontology_enrichment_celltype_v019_2=CL:0000221,2.34e-08,44;CL:0000133,2.34e-08,44;CL:0002319,8.40e-08,43;CL:0000540,7.05e-07,33;CL:0000047,7.05e-07,33;CL:0000031,7.05e-07,33;CL:0000404,7.05e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.17e-16!102;UBERON:0000924!4.17e-16!102;UBERON:0006601!4.17e-16!102;UBERON:0001017!1.53e-15!73;UBERON:0005743!1.53e-15!73;UBERON:0000073!7.14e-15!75;UBERON:0001016!7.14e-15!75;UBERON:0002346!1.27e-12!71;UBERON:0003075!1.27e-12!71;UBERON:0007284!1.27e-12!71;UBERON:0000033!4.23e-12!63;UBERON:0001049!1.27e-10!52;UBERON:0005068!1.27e-10!52;UBERON:0006241!1.27e-10!52;UBERON:0007135!1.27e-10!52;UBERON:0003056!1.12e-09!49;UBERON:0000468!3.23e-09!333;UBERON:0002616!1.28e-08!49;UBERON:0000955!1.31e-08!50;UBERON:0006238!1.31e-08!50;UBERON:0000153!3.52e-07!94;UBERON:0003080!6.56e-07!40;UBERON:0002780!7.75e-07!39;UBERON:0001890!7.75e-07!39;UBERON:0006240!7.75e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.12e-17,95;UBERON:0000924,2.12e-17,95;UBERON:0006601,2.12e-17,95;UBERON:0001017,3.84e-16,73;UBERON:0010371,4.58e-16,73;UBERON:0002346,4.58e-15,64;UBERON:0003075,4.58e-15,64;UBERON:0007284,4.58e-15,64;UBERON:0001016,6.91e-15,75;UBERON:0000073,4.11e-11,54;UBERON:0001049,5.19e-11,52;UBERON:0005068,5.19e-11,52;UBERON:0006241,5.19e-11,52;UBERON:0007135,5.19e-11,52;UBERON:0010314,1.38e-10,92;UBERON:0003056,5.00e-10,49;UBERON:0002616,1.03e-08,46;UBERON:0000955,1.07e-08,47;UBERON:0006238,1.07e-08,47;UBERON:0000026,7.11e-08,12;UBERON:0004708,7.11e-08,12;UBERON:0002101,7.11e-08,12;UBERON:0004357,7.11e-08,12;UBERON:0004347,7.11e-08,12;UBERON:0005732,7.11e-08,12;UBERON:0005733,7.11e-08,12;UBERON:0003080,3.85e-07,40;UBERON:0002780,4.58e-07,39;UBERON:0001890,4.58e-07,39;UBERON:0006240,4.58e-07,39;UBERON:0002020,6.95e-07,34;UBERON:0010707,9.82e-07,13|phase1_expression=1000.77014555786,0,0.454999239389536,0,0,1.6787927191189,1.40167584357315,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,4.69434806608824,16.133861572153,48.1112740188493,34.997381833371,6.01941612989059,21.5628846547457,0,0,0,0,0,0,6.67644320836673,16.9277113367051,10.775133859605,1.69422266034566,1.77858959222228,0,0,0,10.1864037576258,19.5951335713993,5.28817022773236,5.67024940993101,3.78584930432488,61.129310662414,57.2049521064679,6.85948475603743,5.55903731905771,5.51531271966013,8.8092704799511,6.38436690425939,6.75868746327471,7.25374582516066,7.86793734980723,5.73004707612436,6.14202597803038,9.56696437053856,6.26472815884921,24.7488011797881,22.2099822046601,16.7759501242771,0.908714319998209,0.755715601067855,2.02905142091174,0,0.679971333707751,0,0,0,4.63466586434781,0,0,0,550.416084487267,0,0,0,0,0,0,1.48439043634778,0,0,8.32729568477452,5.78484408793068,2.30615497256059,1.65794904607885,1.17588707135705,0,0.247194967734374,0,7.96149496754887,487.079985191649,106.88729493483,146.917201699972,0,23.7152445579353,25.761944938055,0.255457055208591,0,0,0,7.78911324905078,10.980014467647,20.356005042284,3.47648640384553,6.90431734791892,10.8049783170971,20.9291229357407,1.83310854930569,78.5007984549687,0,5.89237196482127,6.37590170517248,12.1848115349741,13.6847218652065,43.5536923545217,60.6885572429844,57.9074015687521,50.2241243640146,42.1686494304596,13.1496475689034,79.9918719109876,158.004109499226,325.505662654949,256.915658284452,183.528891757182,235.208981914279,28.0638316214075,0,0,0,11.3919174894526,22.045449638223,15.4853372856473,10.6535131013345,7.28027657465394,8.4846912088058,2.79040733700489,2.95100741539581,2.10177616260905,0.987359099480883,0.985004784474571,0.324275238183423,0.730999937126662,0.439100230582101,0,21.8701546506692,46.6157894078158,0.991256348951394,0,5.11891801284562,3.71578674976702,5.54130083685001,1.4117846723634,1.33426826306922,0.760902504450237,0,0.329397909448022,1.00534083520108,0.795825888164603,1.75467678407208,0,0,0.199141273254367,1.70701110857774,2.62771579002376,3.38123207019241,1.62921062276251,1.55161989734101,1.40271639780637,0.189709611372772,0,0,0,0,1.83529616287703,2.35870794135844,0.899448449539415,0.202860121388503,0.72353147925725,0,0,0.324270453550071,0.274561413188081,0,1.11642284300551,0.936113019343682,0.505157755894224,0,0,0,16.8647356475731,8.47417877498535,16.8047634917436,12.9079636558676,5.19269398069629,5.2369600994923,4.87834119644497,3.94087860265477,0.8858587585951,2.87018583583477,3.4411296090305,2.76295970985433,0,0,0,1.47529281905711,7.45029215022778,8.99083303931635,19.8087750340823,0,14.13837192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|EntrezGene=12841
|HGNC=
|MCL_coexpression_id=2165
|UniProt=A2ACT7,E9PW00,Q8BSX1
|association_with_transcript=5bp_to_ENSMUST00000103059,ENSMUST00000171895,NM_009936,uc008ojl.1_5end
|description=CAGE_peak_1_at_Col9a3_5end
|id=chr2:180332932..180332956,+
|ontology_enrichment_celltype=CL:0000221!1.47e-08!44;CL:0000133!1.47e-08!44;CL:0002319!5.16e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000221,2.34e-08,44;CL:0000133,2.34e-08,44;CL:0002319,8.40e-08,43;CL:0000540,7.05e-07,33;CL:0000047,7.05e-07,33;CL:0000031,7.05e-07,33;CL:0000404,7.05e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.17e-16!102;UBERON:0000924!4.17e-16!102;UBERON:0006601!4.17e-16!102;UBERON:0001017!1.53e-15!73;UBERON:0005743!1.53e-15!73;UBERON:0000073!7.14e-15!75;UBERON:0001016!7.14e-15!75;UBERON:0002346!1.27e-12!71;UBERON:0003075!1.27e-12!71;UBERON:0007284!1.27e-12!71;UBERON:0000033!4.23e-12!63;UBERON:0001049!1.27e-10!52;UBERON:0005068!1.27e-10!52;UBERON:0006241!1.27e-10!52;UBERON:0007135!1.27e-10!52;UBERON:0003056!1.12e-09!49;UBERON:0000468!3.23e-09!333;UBERON:0002616!1.28e-08!49;UBERON:0000955!1.31e-08!50;UBERON:0006238!1.31e-08!50;UBERON:0000153!3.52e-07!94;UBERON:0003080!6.56e-07!40;UBERON:0002780!7.75e-07!39;UBERON:0001890!7.75e-07!39;UBERON:0006240!7.75e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.12e-17,95;UBERON:0000924,2.12e-17,95;UBERON:0006601,2.12e-17,95;UBERON:0001017,3.84e-16,73;UBERON:0010371,4.58e-16,73;UBERON:0002346,4.58e-15,64;UBERON:0003075,4.58e-15,64;UBERON:0007284,4.58e-15,64;UBERON:0001016,6.91e-15,75;UBERON:0000073,4.11e-11,54;UBERON:0001049,5.19e-11,52;UBERON:0005068,5.19e-11,52;UBERON:0006241,5.19e-11,52;UBERON:0007135,5.19e-11,52;UBERON:0010314,1.38e-10,92;UBERON:0003056,5.00e-10,49;UBERON:0002616,1.03e-08,46;UBERON:0000955,1.07e-08,47;UBERON:0006238,1.07e-08,47;UBERON:0000026,7.11e-08,12;UBERON:0004708,7.11e-08,12;UBERON:0002101,7.11e-08,12;UBERON:0004357,7.11e-08,12;UBERON:0004347,7.11e-08,12;UBERON:0005732,7.11e-08,12;UBERON:0005733,7.11e-08,12;UBERON:0003080,3.85e-07,40;UBERON:0002780,4.58e-07,39;UBERON:0001890,4.58e-07,39;UBERON:0006240,4.58e-07,39;UBERON:0002020,6.95e-07,34;UBERON:0010707,9.82e-07,13
|phase1_expression=1000.77014555786,0,0.454999239389536,0,0,1.6787927191189,1.40167584357315,0,0,0.468129052643987,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,4.69434806608824,16.133861572153,48.1112740188493,34.997381833371,6.01941612989059,21.5628846547457,0,0,0,0,0,0,6.67644320836673,16.9277113367051,10.775133859605,1.69422266034566,1.77858959222228,0,0,0,10.1864037576258,19.5951335713993,5.28817022773236,5.67024940993101,3.78584930432488,61.129310662414,57.2049521064679,6.85948475603743,5.55903731905771,5.51531271966013,8.8092704799511,6.38436690425939,6.75868746327471,7.25374582516066,7.86793734980723,5.73004707612436,6.14202597803038,9.56696437053856,6.26472815884921,24.7488011797881,22.2099822046601,16.7759501242771,0.908714319998209,0.755715601067855,2.02905142091174,0,0.679971333707751,0,0,0,4.63466586434781,0,0,0,550.416084487267,0,0,0,0,0,0,1.48439043634778,0,0,8.32729568477452,5.78484408793068,2.30615497256059,1.65794904607885,1.17588707135705,0,0.247194967734374,0,7.96149496754887,487.079985191649,106.88729493483,146.917201699972,0,23.7152445579353,25.761944938055,0.255457055208591,0,0,0,7.78911324905078,10.980014467647,20.356005042284,3.47648640384553,6.90431734791892,10.8049783170971,20.9291229357407,1.83310854930569,78.5007984549687,0,5.89237196482127,6.37590170517248,12.1848115349741,13.6847218652065,43.5536923545217,60.6885572429844,57.9074015687521,50.2241243640146,42.1686494304596,13.1496475689034,79.9918719109876,158.004109499226,325.505662654949,256.915658284452,183.528891757182,235.208981914279,28.0638316214075,0,0,0,11.3919174894526,22.045449638223,15.4853372856473,10.6535131013345,7.28027657465394,8.4846912088058,2.79040733700489,2.95100741539581,2.10177616260905,0.987359099480883,0.985004784474571,0.324275238183423,0.730999937126662,0.439100230582101,0,21.8701546506692,46.6157894078158,0.991256348951394,0,5.11891801284562,3.71578674976702,5.54130083685001,1.4117846723634,1.33426826306922,0.760902504450237,0,0.329397909448022,1.00534083520108,0.795825888164603,1.75467678407208,0,0,0.199141273254367,1.70701110857774,2.62771579002376,3.38123207019241,1.62921062276251,1.55161989734101,1.40271639780637,0.189709611372772,0,0,0,0,1.83529616287703,2.35870794135844,0.899448449539415,0.202860121388503,0.72353147925725,0,0,0.324270453550071,0.274561413188081,0,1.11642284300551,0.936113019343682,0.505157755894224,0,0,0,16.8647356475731,8.47417877498535,16.8047634917436,12.9079636558676,5.19269398069629,5.2369600994923,4.87834119644497,3.94087860265477,0.8858587585951,2.87018583583477,3.4411296090305,2.76295970985433,0,0,0,1.47529281905711,7.45029215022778,8.99083303931635,19.8087750340823,0,14.1383719234449,11.3582958989852,10.9322848403059,21.9731865687455,20.5513166239195,12.2539270745317,10.7569081699756,15.382806663646,16.9508397588561,11.8586333383957,5.46246237917072,0,1.95872164033981,1.95464351224291,0.329940245945071,1.32745138339963,19.9080121647085,16.3254720760966,12.2593301841334,19.1946230372502,13.5271465095328,8.01127708821486,19.9943551212628,13.1904030002347,5.68866164284469,1.05418608574999,1.03135543248187,1.36175842301515,41.0539294391387,8.79639049722731,17.5756368725906,14.0098784577396,18.1936193954112,19.9104314928566,8.22055362609418,1.64270195644597,0.21183207086382,0,1.97863503529776,2.26050197374268,15.4401087816079,4.41677672811605,3.77524069413641,1.1659233465194,8.34413859047294,0,1.857481811669,0.370389054739423,0,0,0,0,0,0,3.81868247206045,6.01038387804157,6.91286188231286,2.80813886136683,1.67270636811575,0.655087691238533,1.48350781023303,1.32245529160537,1.57053565190418,0.129614973291793,1.24267862617385,0.56369293868419,96.4381721983663,77.2691150434646,22.7507890362536,17.8240556399269,11.4890165333729,3.52071715937262,2.604087696879,3.25063967719704,1.20792060413003,3.74439008135225,0,3.24360344464263,13.1470025170979,0.25984164595559,4.65469408735452,2.58285761215644,0.120195449519969,0.443068581523732,0.605798699688886,0.228620419965,0.403304740547362,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0.167884616364078,0,0,0,0.428736758158132,0,27.6728402882363,19.3336599333014,21.1971339972577,12.0297227640581,6.16574267793578,6.7985450765073,8.10027000278167,6.30449684513909,5.43770890781046,2.5888015587591,1.86817225651518,51.075183795332,112.171978980466,158.019366094391,46.1148957781561,38.0556062491529,13.1125569402953,12.5681384915725,14.1204452220399,10.1078884705519,13.4344028941827,10.9403278003924,9.83235828433765,11.9727034997106,9.13223956394251,13.3362233559261,13.2108131577135,11.1887347868949,11.1263193216893,11.7759136107518,17.8292011240416,11.8908790126756,12.3986818772607,11.046327664057,12.7047663560696,11.761430496943,12.8049581010941,9.73357932320019,11.2717414492065,20.7622640513363,10.914421667424,12.3130602969454,12.6861623382604,12.7048209772492,129.440335968346,137.39581786587,69.2437560998409,7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|short_description=p1@Col9a3
}}

Revision as of 23:13, 13 September 2013

Short description:p1@Col9a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Col9a3_5end
Coexpression cluster:MCL_coexpression_mm9:2165
Association with transcript: 5bp_to_ENSMUST00000103059, ENSMUST00000171895, NM_009936, uc008ojl.1_5end
EntrezGene:Col9a3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Col9a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71000.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.13
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B848.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C335.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C810.19
Mouse Microglia, donor2.CNhs12634.11736-123E819.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F161.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D557.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.75
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6550.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C58.33
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F5487.08
bone (os femoris), neonate N16.CNhs11225.1525-43A6106.89
bone (os femoris), neonate N20.CNhs11195.1350-25C3146.92
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B223.72
cerebellum, neonate N30.CNhs11135.1395-42I225.76
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F120.36
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B220.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A278.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C66.38
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D443.55
eyeball, neonate N00.CNhs11207.633-15C660.69
eyeball, neonate N01.CNhs11140.1532-43E757.91
eyeball, neonate N02.CNhs11205.1551-44G850.22
eyeball, neonate N16.CNhs11188.777-19A242.17
forelimb, embryo E11.CNhs10596.335-25E213.15
forelimb, embryo E12.CNhs10600.359-14H279.99
forelimb, embryo E13.CNhs10589.384-1E2158.00
forelimb, embryo E14.CNhs10577.413-26A8325.51
forelimb, embryo E15.CNhs11007.437-20E7256.92
forelimb, embryo E17.CNhs10598.1517-43C4183.53
forelimb, embryo E18.CNhs11008.1520-43B5235.21
gonad, embryo E13.CNhs11044.1564-45I628.06
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F522.05
heart, embryo E13.CNhs11013.376-3I915.49
heart, embryo E14.CNhs10597.403-26D410.65
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C68.48
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E821.87
hippocampus, neonate N00.CNhs11228.627-43G146.62
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G216.86
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C516.80
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A319.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F419.91
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E512.26
pancreas, embryo E17.CNhs10599.1558-45G319.19
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G98.01
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E641.05
pituitary gland, embryo E13.CNhs11009.370-44C78.80
pituitary gland, embryo E14.CNhs11037.398-44A517.58
pituitary gland, embryo E15.CNhs10592.427-16B914.01
pituitary gland, embryo E16.CNhs11036.449-43F618.19
pituitary gland, embryo E17.CNhs11039.1265-44F519.91
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H315.44
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F596.44
testis, embryo E15.CNhs11034.443-27C577.27
testis, embryo E16.CNhs11033.470-26G522.75
testis, embryo E17.CNhs11029.486-18I517.82
testis, embryo E18.CNhs11027.503-18G511.49
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I213.15
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C951.08
whole body, embryo E13.CNhs10512.372-23H2112.17
whole body, embryo E14.5.CNhs10578.420-27D2158.02
whole body, embryo E14.CNhs10519.395-14B146.11
whole body, embryo E16.CNhs10514.453-14F238.06
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.70
whole body, embryo E17.5.CNhs10513.490-9F9129.44
whole body, embryo E17.CNhs10517.475-3I5137.40
whole body, embryo E18.CNhs10516.493-3B369.24
whole body, neonate N00.CNhs10525.657-19C273.92
whole body, neonate N01.CNhs10576.659-23C6354.84
whole body, neonate N06.CNhs10515.692-21D1245.96
whole body, neonate N10.CNhs10518.761-6B4131.47





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.34e-0844
neurectodermal cell2.34e-0844
neural cell8.40e-0843
neuron7.05e-0733
neuronal stem cell7.05e-0733
neuroblast7.05e-0733
electrically signaling cell7.05e-0733

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.12e-1795
ectoderm2.12e-1795
presumptive ectoderm2.12e-1795
central nervous system3.84e-1673
ecto-epithelium4.58e-1673
neurectoderm4.58e-1564
neural plate4.58e-1564
presumptive neural plate4.58e-1564
nervous system6.91e-1575
regional part of nervous system4.11e-1154
neural tube5.19e-1152
neural rod5.19e-1152
future spinal cord5.19e-1152
neural keel5.19e-1152
structure with developmental contribution from neural crest1.38e-1092
pre-chordal neural plate5.00e-1049
regional part of brain1.03e-0846
brain1.07e-0847
future brain1.07e-0847
appendage7.11e-0812
paired limb/fin7.11e-0812
limb7.11e-0812
paired limb/fin bud7.11e-0812
limb bud7.11e-0812
limb/fin field7.11e-0812
limb field7.11e-0812
anterior neural tube3.85e-0740
regional part of forebrain4.58e-0739
forebrain4.58e-0739
future forebrain4.58e-0739
gray matter6.95e-0734
appendage girdle complex9.82e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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