FFCP PHASE1:Mm9::chr2:181048983..181049003,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20262|HGNC=|MCL_coexpression_id=1|UniProt=O70166,Q545T6,Q9D1K5|association_with_transcript=201bp_to_ENSMUST00000103045,NM_009133,uc008olt.1_5end|description=CAGE_peak_1_at_Stmn3_5end|id=chr2:181048983..181049003,-|ontology_enrichment_celltype=CL:0000221!9.51e-17!44;CL:0000133!9.51e-17!44;CL:0002319!1.32e-16!43;CL:0000540!2.24e-16!33;CL:0000047!2.24e-16!33;CL:0000031!2.24e-16!33;CL:0000404!2.24e-16!33;CL:0000117!1.44e-14!23;CL:0000337!1.44e-14!23;CL:0000055!3.56e-11!50;CL:0000393!5.39e-11!39;CL:0000211!5.39e-11!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.15e-18,44;CL:0000133,3.15e-18,44;CL:0002319,4.53e-18,43;CL:0000540,8.06e-18,33;CL:0000047,8.06e-18,33;CL:0000031,8.06e-18,33;CL:0000404,8.06e-18,33;CL:0000117,7.77e-16,23;CL:0000337,7.77e-16,23;CL:0000393,1.78e-12,39;CL:0000211,1.78e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.83e-34!75;UBERON:0001016!4.83e-34!75;UBERON:0001017!9.15e-34!73;UBERON:0005743!9.15e-34!73;UBERON:0004121!6.72e-32!102;UBERON:0000924!6.72e-32!102;UBERON:0006601!6.72e-32!102;UBERON:0002346!3.70e-30!71;UBERON:0003075!3.70e-30!71;UBERON:0007284!3.70e-30!71;UBERON:0000033!3.43e-26!63;UBERON:0001049!9.62e-26!52;UBERON:0005068!9.62e-26!52;UBERON:0006241!9.62e-26!52;UBERON:0007135!9.62e-26!52;UBERON:0000955!3.28e-24!50;UBERON:0006238!3.28e-24!50;UBERON:0002616!1.18e-23!49;UBERON:0003056!4.25e-21!49;UBERON:0002020!1.38e-19!34;UBERON:0003080!5.43e-19!40;UBERON:0002780!2.26e-18!39;UBERON:0001890!2.26e-18!39;UBERON:0006240!2.26e-18!39;UBERON:0002791!3.38e-16!29;UBERON:0003528!3.38e-16!29;UBERON:0001893!3.38e-16!29;UBERON:0007811!1.18e-12!86;UBERON:0000956!1.38e-11!21;UBERON:0001869!1.38e-11!21;UBERON:0000203!1.38e-11!21;UBERON:0000153!7.45e-10!94;UBERON:0002619!1.08e-09!17;UBERON:0002021!5.95e-08!10;UBERON:0000411!5.95e-08!10;UBERON:0001950!5.95e-08!10;UBERON:0003076!2.71e-07!12;UBERON:0003057!2.71e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.19e-37,75;UBERON:0001017,6.43e-37,73;UBERON:0004121,5.76e-33,95;UBERON:0000924,5.76e-33,95;UBERON:0006601,5.76e-33,95;UBERON:0002346,5.89e-32,64;UBERON:0003075,5.89e-32,64;UBERON:0007284,5.89e-32,64;UBERON:0000073,8.71e-30,54;UBERON:0001049,4.17e-28,52;UBERON:0005068,4.17e-28,52;UBERON:0006241,4.17e-28,52;UBERON:0007135,4.17e-28,52;UBERON:0010371,5.98e-26,73;UBERON:0000955,4.32e-24,47;UBERON:0006238,4.32e-24,47;UBERON:0002616,1.72e-23,46;UBERON:0003056,5.27e-23,49;UBERON:0002020,2.42e-21,34;UBERON:0003080,1.08e-20,40;UBERON:0010314,1.43e-20,92;UBERON:0002780,5.20e-20,39;UBERON:0001890,5.20e-20,39;UBERON:0006240,5.20e-20,39;UBERON:0003528,1.27e-17,29;UBERON:0002791,1.27e-17,29;UBERON:0001893,1.27e-17,29;UBERON:0000956,1.45e-12,21;UBERON:0001869,1.45e-12,21;UBERON:0000203,1.45e-12,21;UBERON:0002619,1.74e-10,17;UBERON:0002021,1.41e-08,10;UBERON:0000411,1.41e-08,10;UBERON:0001950,1.41e-08,10;UBERON:0003076,7.46e-08,12;UBERON:0003057,7.46e-08,12|phase1_expression=39.2364675406745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,114.213138672887,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6478268869608,74.1285531693518,7.90870257844099,5.05517737593137,9.09911740564856,20.125359011096,0,0,0,0.257259436035947,0,0,740.478246746128,1053.75003070989,889.899290522676,1.0165335962074,0.889294796111139,0.899899717281399,2.96659908770092,2.1314403448383,34.1544125990981,47.6430698598728,247.610794192645,372.346377918803,302.657619384639,1341.70267374467,1270.65671609463,378.864041971853,313.03130834556,518.439395648052,1444.72035871198,823.838705325631,880.626255158044,767.578194589728,717.080150555687,671.97824801822,1352.64163016169,870.593757719009,768.880782812908,1160.54199818078,857.647005133796,674.020396104287,18.5529173666301,44.4360773427899,0,0,0,2.15881276655127,0,0,30.0551059081949,0.511290967734173,0.259786004602869,0,42.8163996121109,0,0,0,0,0,0,14.0446172054444,0,17.5161724096493,36.2584332941224,77.638696969596,36.6678640637133,53.506537396181,30.690652562419,7.1629957057915,0,2.16899035379867,0,0,0,0,11.1835056730873,572.679238954586,358.782208771449,1.78819938646014,0,0,0,809.768196622472,573.705755934558,409.130570479486,756.135792836403,587.122690030439,895.150895962585,531.177895283839,0.407357455401265,0,0.252722758433675,21.8859530121933,10.539755879979,97.0186880709256,103.535724638076,86.8059750733719,52.3200678473711,60.3415622541642,59.8754019936667,96.7550606563919,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.23674473558521,0.393528463494808,1.07986979021165,0,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.405344047729279,0.438599962275997,0.219550115291051,0.402619256281115,593.017654950839,368.604321542597,0.330418782983798,2.11560453330835,8.10495352033889,14.8631469990681,13.6599509001419,15.327947871374,15.7888411129858,16.1691782195675,2.37264530772256,13.1759163779209,9.29940272560997,15.7175612912509,8.57841983324129,4.49409704327111,3.6743468478698,4.58024928485045,3.60369011810855,8.79713547094912,1.1270773567308,3.46207257337034,2.32742984601151,1.75339549725796,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,9.85355341206521,0.977789858652155,1.35796068620151,1.17345124144251,1.50755631697634,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,0.327726629431476,0.863424909329478,0,0,0,0.491764273019036,0,964.266843466679,713.93638303311,0,0.504941854408746,70.6738411492415,89.0200336996336,113.528130605185,20.790285421872,33.4198011123591,39.0645612488589,63.5552801629584,101.997294411048,82.2198578128769,490.015007543256,0.141940085208269,0.890328018336276,0.162886959353576,0,0,4.37005145078967,2.72091201268276,2.26326095707078,3.2483208216885,5.53383266299069,3.6179961043551,3.27180356529755,2.85197902707777,3.47640433729398,0,0,78.641548929125,25.2085531643834,25.4836607052026,19.5046701878749,12.5911565886014,57.0780216326626,84.7427456100923,90.1216249379214,0,0,16.5396298541221,0,0.161464426695906,0,0.119372344003136,0.164140899745061,4.37221254944776,803.818684215559,0,0.619160603889667,0,0.188368457004691,0,0,0.169978429993855,0,0,1.90934123603023,9.01557581706236,13.6224042974989,15.9847904416266,13.381650944926,12.0099410060398,11.1937407499401,10.1663750542163,2.87931536182433,5.18459893167171,1.24267862617385,0,0,0,0.194451188344048,0.258319646955462,0,0.469428954583016,0,0.209718688851422,0,0,0,2.02725215290164,1.33524244314275,0.25984164595559,0.895133478337407,0.39736270956253,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,1.36038230169127,0,0,0,11.5913756419314,0.750729901804728,0,1.50057865355346,0,1287.63420116691,1241.03683762335,1272.4009353489,1052.60074185509,998.850313825596,969.925764248375,841.07803528883,876.325061474333,972.443609680103,882.781331536853,68.707224100725,67.0361787313732,89.4644094151663,70.0147345156687,120.737181673718,109.203044019308,99.344287327322,104.459774020119,87.6109442185656,84.6535659408722,102.405637155657,96.0108077655128,79.9698473792796,75.8057804473652,69.7266593121145,66.6811167796303,66.4017187664022,71.955139232962,90.2468122759241,85.5225725980848,94.9747829107601,84.123532119526,80.5914322021945,91.7135888949993,84.1337860913056,84.6146078916765,86.1590752230759,90.4959807346179,74.5564585013781,95.9553284534733,77.7059368713341,74.6663976406771,76.5262050727319,80.2572837343304,70.6038196190977,197.350356570977,84.9171738656833,72.6264162683248,56.0474812961711,35.2946270591225,37.0988536992674|short_description=p1@Stmn3}} | ||
|EntrezGene=20262 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=O70166,Q545T6,Q9D1K5 | |||
|association_with_transcript=201bp_to_ENSMUST00000103045,NM_009133,uc008olt.1_5end | |||
|description=CAGE_peak_1_at_Stmn3_5end | |||
|id=chr2:181048983..181049003,- | |||
|ontology_enrichment_celltype=CL:0000221!9.51e-17!44;CL:0000133!9.51e-17!44;CL:0002319!1.32e-16!43;CL:0000540!2.24e-16!33;CL:0000047!2.24e-16!33;CL:0000031!2.24e-16!33;CL:0000404!2.24e-16!33;CL:0000117!1.44e-14!23;CL:0000337!1.44e-14!23;CL:0000055!3.56e-11!50;CL:0000393!5.39e-11!39;CL:0000211!5.39e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.15e-18,44;CL:0000133,3.15e-18,44;CL:0002319,4.53e-18,43;CL:0000540,8.06e-18,33;CL:0000047,8.06e-18,33;CL:0000031,8.06e-18,33;CL:0000404,8.06e-18,33;CL:0000117,7.77e-16,23;CL:0000337,7.77e-16,23;CL:0000393,1.78e-12,39;CL:0000211,1.78e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.83e-34!75;UBERON:0001016!4.83e-34!75;UBERON:0001017!9.15e-34!73;UBERON:0005743!9.15e-34!73;UBERON:0004121!6.72e-32!102;UBERON:0000924!6.72e-32!102;UBERON:0006601!6.72e-32!102;UBERON:0002346!3.70e-30!71;UBERON:0003075!3.70e-30!71;UBERON:0007284!3.70e-30!71;UBERON:0000033!3.43e-26!63;UBERON:0001049!9.62e-26!52;UBERON:0005068!9.62e-26!52;UBERON:0006241!9.62e-26!52;UBERON:0007135!9.62e-26!52;UBERON:0000955!3.28e-24!50;UBERON:0006238!3.28e-24!50;UBERON:0002616!1.18e-23!49;UBERON:0003056!4.25e-21!49;UBERON:0002020!1.38e-19!34;UBERON:0003080!5.43e-19!40;UBERON:0002780!2.26e-18!39;UBERON:0001890!2.26e-18!39;UBERON:0006240!2.26e-18!39;UBERON:0002791!3.38e-16!29;UBERON:0003528!3.38e-16!29;UBERON:0001893!3.38e-16!29;UBERON:0007811!1.18e-12!86;UBERON:0000956!1.38e-11!21;UBERON:0001869!1.38e-11!21;UBERON:0000203!1.38e-11!21;UBERON:0000153!7.45e-10!94;UBERON:0002619!1.08e-09!17;UBERON:0002021!5.95e-08!10;UBERON:0000411!5.95e-08!10;UBERON:0001950!5.95e-08!10;UBERON:0003076!2.71e-07!12;UBERON:0003057!2.71e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.19e-37,75;UBERON:0001017,6.43e-37,73;UBERON:0004121,5.76e-33,95;UBERON:0000924,5.76e-33,95;UBERON:0006601,5.76e-33,95;UBERON:0002346,5.89e-32,64;UBERON:0003075,5.89e-32,64;UBERON:0007284,5.89e-32,64;UBERON:0000073,8.71e-30,54;UBERON:0001049,4.17e-28,52;UBERON:0005068,4.17e-28,52;UBERON:0006241,4.17e-28,52;UBERON:0007135,4.17e-28,52;UBERON:0010371,5.98e-26,73;UBERON:0000955,4.32e-24,47;UBERON:0006238,4.32e-24,47;UBERON:0002616,1.72e-23,46;UBERON:0003056,5.27e-23,49;UBERON:0002020,2.42e-21,34;UBERON:0003080,1.08e-20,40;UBERON:0010314,1.43e-20,92;UBERON:0002780,5.20e-20,39;UBERON:0001890,5.20e-20,39;UBERON:0006240,5.20e-20,39;UBERON:0003528,1.27e-17,29;UBERON:0002791,1.27e-17,29;UBERON:0001893,1.27e-17,29;UBERON:0000956,1.45e-12,21;UBERON:0001869,1.45e-12,21;UBERON:0000203,1.45e-12,21;UBERON:0002619,1.74e-10,17;UBERON:0002021,1.41e-08,10;UBERON:0000411,1.41e-08,10;UBERON:0001950,1.41e-08,10;UBERON:0003076,7.46e-08,12;UBERON:0003057,7.46e-08,12 | |||
|phase1_expression=39.2364675406745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,114.213138672887,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6478268869608,74.1285531693518,7.90870257844099,5.05517737593137,9.09911740564856,20.125359011096,0,0,0,0.257259436035947,0,0,740.478246746128,1053.75003070989,889.899290522676,1.0165335962074,0.889294796111139,0.899899717281399,2.96659908770092,2.1314403448383,34.1544125990981,47.6430698598728,247.610794192645,372.346377918803,302.657619384639,1341.70267374467,1270.65671609463,378.864041971853,313.03130834556,518.439395648052,1444.72035871198,823.838705325631,880.626255158044,767.578194589728,717.080150555687,671.97824801822,1352.64163016169,870.593757719009,768.880782812908,1160.54199818078,857.647005133796,674.020396104287,18.5529173666301,44.4360773427899,0,0,0,2.15881276655127,0,0,30.0551059081949,0.511290967734173,0.259786004602869,0,42.8163996121109,0,0,0,0,0,0,14.0446172054444,0,17.5161724096493,36.2584332941224,77.638696969596,36.6678640637133,53.506537396181,30.690652562419,7.1629957057915,0,2.16899035379867,0,0,0,0,11.1835056730873,572.679238954586,358.782208771449,1.78819938646014,0,0,0,809.768196622472,573.705755934558,409.130570479486,756.135792836403,587.122690030439,895.150895962585,531.177895283839,0.407357455401265,0,0.252722758433675,21.8859530121933,10.539755879979,97.0186880709256,103.535724638076,86.8059750733719,52.3200678473711,60.3415622541642,59.8754019936667,96.7550606563919,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.23674473558521,0.393528463494808,1.07986979021165,0,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.405344047729279,0.438599962275997,0.219550115291051,0.402619256281115,593.017654950839,368.604321542597,0.330418782983798,2.11560453330835,8.10495352033889,14.8631469990681,13.6599509001419,15.327947871374,15.7888411129858,16.1691782195675,2.37264530772256,13.1759163779209,9.29940272560997,15.7175612912509,8.57841983324129,4.49409704327111,3.6743468478698,4.58024928485045,3.60369011810855,8.79713547094912,1.1270773567308,3.46207257337034,2.32742984601151,1.75339549725796,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,9.85355341206521,0.977789858652155,1.35796068620151,1.17345124144251,1.50755631697634,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,0.327726629431476,0.863424909329478,0,0,0,0.491764273019036,0,964.266843466679,713.93638303311,0,0.504941854408746,70.6738411492415,89.0200336996336,113.528130605185,20.790285421872,33.4198011123591,39.0645612488589,63.5552801629584,101.997294411048,82.2198578128769,490.015007543256,0.141940085208269,0.890328018336276,0.162886959353576,0,0,4.37005145078967,2.72091201268276,2.26326095707078,3.2483208216885,5.53383266299069,3.6179961043551,3.27180356529755,2.85197902707777,3.47640433729398,0,0,78.641548929125,25.2085531643834,25.4836607052026,19.5046701878749,12.5911565886014,57.0780216326626,84.7427456100923,90.1216249379214,0,0,16.5396298541221,0,0.161464426695906,0,0.119372344003136,0.164140899745061,4.37221254944776,803.818684215559,0,0.619160603889667,0,0.188368457004691,0,0,0.169978429993855,0,0,1.90934123603023,9.01557581706236,13.6224042974989,15.9847904416266,13.381650944926,12.0099410060398,11.1937407499401,10.1663750542163,2.87931536182433,5.18459893167171,1.24267862617385,0,0,0,0.194451188344048,0.258319646955462,0,0.469428954583016,0,0.209718688851422,0,0,0,2.02725215290164,1.33524244314275,0.25984164595559,0.895133478337407,0.39736270956253,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,1.36038230169127,0,0,0,11.5913756419314,0.750729901804728,0,1.50057865355346,0,1287.63420116691,1241.03683762335,1272.4009353489,1052.60074185509,998.850313825596,969.925764248375,841.07803528883,876.325061474333,972.443609680103,882.781331536853,68.707224100725,67.0361787313732,89.4644094151663,70.0147345156687,120.737181673718,109.203044019308,99.344287327322,104.459774020119,87.6109442185656,84.6535659408722,102.405637155657,96.0108077655128,79.9698473792796,75.8057804473652,69.7266593121145,66.6811167796303,66.4017187664022,71.955139232962,90.2468122759241,85.5225725980848,94.9747829107601,84.123532119526,80.5914322021945,91.7135888949993,84.1337860913056,84.6146078916765,86.1590752230759,90.4959807346179,74.5564585013781,95.9553284534733,77.7059368713341,74.6663976406771,76.5262050727319,80.2572837343304,70.6038196190977,197.350356570977,84.9171738656833,72.6264162683248,56.0474812961711,35.2946270591225,37.0988536992674 | |||
|short_description=p1@Stmn3 | |||
}} |
Revision as of 23:16, 13 September 2013
Short description: | p1@Stmn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stmn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 201bp_to_ENSMUST00000103045, NM_009133, uc008olt.1_5end |
EntrezGene: | Stmn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.15e-18 | 44 |
neurectodermal cell | 3.15e-18 | 44 |
neural cell | 4.53e-18 | 43 |
neuron | 8.06e-18 | 33 |
neuronal stem cell | 8.06e-18 | 33 |
neuroblast | 8.06e-18 | 33 |
electrically signaling cell | 8.06e-18 | 33 |
CNS neuron (sensu Vertebrata) | 7.77e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.77e-16 | 23 |
electrically responsive cell | 1.78e-12 | 39 |
electrically active cell | 1.78e-12 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.