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FFCP PHASE1:Mm9::chr4:129296296..129296307,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=230767|HGNC=|MCL_coexpression_id=2225|UniProt=|association_with_transcript=12bp_to_ENSMUST00000131559_5end|description=CAGE_peak_2_at_Iqcc_5end|id=chr4:129296296..129296307,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.42e-17!52;UBERON:0005068!1.42e-17!52;UBERON:0006241!1.42e-17!52;UBERON:0007135!1.42e-17!52;UBERON:0001017!2.17e-16!73;UBERON:0005743!2.17e-16!73;UBERON:0000955!1.76e-15!50;UBERON:0006238!1.76e-15!50;UBERON:0000073!2.80e-15!75;UBERON:0001016!2.80e-15!75;UBERON:0002346!4.16e-15!71;UBERON:0003075!4.16e-15!71;UBERON:0007284!4.16e-15!71;UBERON:0002616!6.69e-15!49;UBERON:0000033!1.12e-14!63;UBERON:0004121!7.77e-14!102;UBERON:0000924!7.77e-14!102;UBERON:0006601!7.77e-14!102;UBERON:0003080!3.70e-13!40;UBERON:0002780!8.87e-13!39;UBERON:0001890!8.87e-13!39;UBERON:0006240!8.87e-13!39;UBERON:0003056!1.15e-12!49;UBERON:0002020!1.00e-10!34;UBERON:0004111!9.80e-10!122;UBERON:0000025!1.00e-09!114;UBERON:0002791!1.09e-09!29;UBERON:0003528!1.09e-09!29;UBERON:0001893!1.09e-09!29;UBERON:0000153!9.40e-09!94;UBERON:0007811!1.16e-08!86;UBERON:0000956!2.95e-08!21;UBERON:0001869!2.95e-08!21;UBERON:0000203!2.95e-08!21;UBERON:0002619!1.84e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000955,8.08e-22,47;UBERON:0006238,8.08e-22,47;UBERON:0002616,7.45e-21,46;UBERON:0001049,1.18e-20,52;UBERON:0005068,1.18e-20,52;UBERON:0006241,1.18e-20,52;UBERON:0007135,1.18e-20,52;UBERON:0000073,3.93e-18,54;UBERON:0001017,1.83e-17,73;UBERON:0003080,3.16e-17,40;UBERON:0001016,1.28e-16,75;UBERON:0002780,1.34e-16,39;UBERON:0001890,1.34e-16,39;UBERON:0006240,1.34e-16,39;UBERON:0002346,2.22e-16,64;UBERON:0003075,2.22e-16,64;UBERON:0007284,2.22e-16,64;UBERON:0003056,3.03e-14,49;UBERON:0010371,8.26e-13,73;UBERON:0003528,5.19e-12,29;UBERON:0002791,5.19e-12,29;UBERON:0001893,5.19e-12,29;UBERON:0004121,1.17e-11,95;UBERON:0000924,1.17e-11,95;UBERON:0006601,1.17e-11,95;UBERON:0010314,2.16e-11,92;UBERON:0002020,3.25e-11,34;UBERON:0000025,1.90e-10,114;UBERON:0004111,7.22e-10,122;UBERON:0000956,3.52e-09,21;UBERON:0001869,3.52e-09,21;UBERON:0000203,3.52e-09,21;UBERON:0002619,3.86e-09,17|phase1_expression=0.640595388419176,0,1.81999695755814,0,0,0.16787927191189,0,0.516493293766305,0,0,0,0,0.171200729931206,0.699363219351979,0,0.404950534779652,0,0.157731082679119,0.137114433605739,0,2.63634199468316,0.198581902401771,0.522399578277871,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0.523523743973798,0,0.683045484958446,0,0.377690453926732,0.506884656097573,0.183546752161682,2.34717403304412,0.872100625521786,3.07560655828261,2.3331587888914,1.67983705950435,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,1.41621522601718,0.528990979272033,0.633831403506179,1.0165335962074,1.77858959222228,0,0,0,0.299600110518405,3.84218305321555,0.829516898467821,1.21505344498522,0.630974884054146,0.856952953211411,0.883474163806454,0.61245399607477,0.958454710182364,1.83843757322004,0,0.638436690425939,0.768032666281217,0.659431438650969,1.55528994124096,0,1.67509799400829,1.12552522006336,1.98637722109853,1.17851434189467,1.13897344639282,0.931997229126503,0.151452386666368,0.302286240427142,0.289864488701678,0.860423876981386,0.679971333707751,2.15881276655127,2.59910566979068,2.24013443548668,0.561777680527007,0.511290967734173,0.779358013808606,0,0.704217098883403,2.56652954828636,0,0,0.216491041011214,0.506719730950197,0,1.37020655662872,0.517875767294343,1.03909497345377,0.346970653532272,0,0.691846491768175,0.753613202763113,0.823120949949934,0.502666365318702,0.741584903203122,0.144599356919912,0,0.808834249737046,1.32504911076236,0,0,1.46390398505774,1.8850203613211,0,0.11981512450592,0,0.508280908292259,1.3481157546434,1.37250180845588,2.1361239859187,2.60736480288415,3.06858548796397,1.0389402227978,1.78465389374533,0.509196819251581,0.622034853050465,5.05445516867349,0.210441855886474,0.910843100738926,0.459804208866946,1.44049703844279,1.05493372485001,0.544291993210623,0.640568601424249,0.655912071918102,0.776110112217047,0.646703978798527,0.189106080167819,0.703804496655795,0.876782929710299,1.11218899690239,0.348252166522167,1.02891068203972,0.398068533636986,0.702213187313235,0,0.568326998791185,1.03562886267751,0.703578179943289,1.08037236876609,0.23674473558521,0.590292695242212,0.771335564436891,0.465067889500816,0.268273401399619,0.467061369468678,1.31647879930784,1.14917224855367,1.13496333364198,0.730999937126662,0.878200461164203,0.134206418760372,2.3131894342054,2.16099685996497,0.660837565967596,0.264450566663544,1.70630600428187,0.696710015581316,0.515469845288373,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.974820435595601,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812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|EntrezGene=230767
|HGNC=
|MCL_coexpression_id=2225
|UniProt=
|association_with_transcript=12bp_to_ENSMUST00000131559_5end
|description=CAGE_peak_2_at_Iqcc_5end
|id=chr4:129296296..129296307,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.42e-17!52;UBERON:0005068!1.42e-17!52;UBERON:0006241!1.42e-17!52;UBERON:0007135!1.42e-17!52;UBERON:0001017!2.17e-16!73;UBERON:0005743!2.17e-16!73;UBERON:0000955!1.76e-15!50;UBERON:0006238!1.76e-15!50;UBERON:0000073!2.80e-15!75;UBERON:0001016!2.80e-15!75;UBERON:0002346!4.16e-15!71;UBERON:0003075!4.16e-15!71;UBERON:0007284!4.16e-15!71;UBERON:0002616!6.69e-15!49;UBERON:0000033!1.12e-14!63;UBERON:0004121!7.77e-14!102;UBERON:0000924!7.77e-14!102;UBERON:0006601!7.77e-14!102;UBERON:0003080!3.70e-13!40;UBERON:0002780!8.87e-13!39;UBERON:0001890!8.87e-13!39;UBERON:0006240!8.87e-13!39;UBERON:0003056!1.15e-12!49;UBERON:0002020!1.00e-10!34;UBERON:0004111!9.80e-10!122;UBERON:0000025!1.00e-09!114;UBERON:0002791!1.09e-09!29;UBERON:0003528!1.09e-09!29;UBERON:0001893!1.09e-09!29;UBERON:0000153!9.40e-09!94;UBERON:0007811!1.16e-08!86;UBERON:0000956!2.95e-08!21;UBERON:0001869!2.95e-08!21;UBERON:0000203!2.95e-08!21;UBERON:0002619!1.84e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000955,8.08e-22,47;UBERON:0006238,8.08e-22,47;UBERON:0002616,7.45e-21,46;UBERON:0001049,1.18e-20,52;UBERON:0005068,1.18e-20,52;UBERON:0006241,1.18e-20,52;UBERON:0007135,1.18e-20,52;UBERON:0000073,3.93e-18,54;UBERON:0001017,1.83e-17,73;UBERON:0003080,3.16e-17,40;UBERON:0001016,1.28e-16,75;UBERON:0002780,1.34e-16,39;UBERON:0001890,1.34e-16,39;UBERON:0006240,1.34e-16,39;UBERON:0002346,2.22e-16,64;UBERON:0003075,2.22e-16,64;UBERON:0007284,2.22e-16,64;UBERON:0003056,3.03e-14,49;UBERON:0010371,8.26e-13,73;UBERON:0003528,5.19e-12,29;UBERON:0002791,5.19e-12,29;UBERON:0001893,5.19e-12,29;UBERON:0004121,1.17e-11,95;UBERON:0000924,1.17e-11,95;UBERON:0006601,1.17e-11,95;UBERON:0010314,2.16e-11,92;UBERON:0002020,3.25e-11,34;UBERON:0000025,1.90e-10,114;UBERON:0004111,7.22e-10,122;UBERON:0000956,3.52e-09,21;UBERON:0001869,3.52e-09,21;UBERON:0000203,3.52e-09,21;UBERON:0002619,3.86e-09,17
|phase1_expression=0.640595388419176,0,1.81999695755814,0,0,0.16787927191189,0,0.516493293766305,0,0,0,0,0.171200729931206,0.699363219351979,0,0.404950534779652,0,0.157731082679119,0.137114433605739,0,2.63634199468316,0.198581902401771,0.522399578277871,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0.523523743973798,0,0.683045484958446,0,0.377690453926732,0.506884656097573,0.183546752161682,2.34717403304412,0.872100625521786,3.07560655828261,2.3331587888914,1.67983705950435,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,1.41621522601718,0.528990979272033,0.633831403506179,1.0165335962074,1.77858959222228,0,0,0,0.299600110518405,3.84218305321555,0.829516898467821,1.21505344498522,0.630974884054146,0.856952953211411,0.883474163806454,0.61245399607477,0.958454710182364,1.83843757322004,0,0.638436690425939,0.768032666281217,0.659431438650969,1.55528994124096,0,1.67509799400829,1.12552522006336,1.98637722109853,1.17851434189467,1.13897344639282,0.931997229126503,0.151452386666368,0.302286240427142,0.289864488701678,0.860423876981386,0.679971333707751,2.15881276655127,2.59910566979068,2.24013443548668,0.561777680527007,0.511290967734173,0.779358013808606,0,0.704217098883403,2.56652954828636,0,0,0.216491041011214,0.506719730950197,0,1.37020655662872,0.517875767294343,1.03909497345377,0.346970653532272,0,0.691846491768175,0.753613202763113,0.823120949949934,0.502666365318702,0.741584903203122,0.144599356919912,0,0.808834249737046,1.32504911076236,0,0,1.46390398505774,1.8850203613211,0,0.11981512450592,0,0.508280908292259,1.3481157546434,1.37250180845588,2.1361239859187,2.60736480288415,3.06858548796397,1.0389402227978,1.78465389374533,0.509196819251581,0.622034853050465,5.05445516867349,0.210441855886474,0.910843100738926,0.459804208866946,1.44049703844279,1.05493372485001,0.544291993210623,0.640568601424249,0.655912071918102,0.776110112217047,0.646703978798527,0.189106080167819,0.703804496655795,0.876782929710299,1.11218899690239,0.348252166522167,1.02891068203972,0.398068533636986,0.702213187313235,0,0.568326998791185,1.03562886267751,0.703578179943289,1.08037236876609,0.23674473558521,0.590292695242212,0.771335564436891,0.465067889500816,0.268273401399619,0.467061369468678,1.31647879930784,1.14917224855367,1.13496333364198,0.730999937126662,0.878200461164203,0.134206418760372,2.3131894342054,2.16099685996497,0.660837565967596,0.264450566663544,1.70630600428187,0.696710015581316,0.515469845288373,1.00841762311671,0.444756087689741,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.974820435595601,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,1.25673363870702,0,0.610953983535943,0.775809948670503,0.420814919341911,0.69560190836683,0.442830443938806,0.31399745568275,0.370191491765402,1.1858105083486,0,0.393117990226406,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.575392274901621,0,0.549122826376163,0,0,0.312037673114561,0.757736633841335,0.717589654087649,0,0.554259570499814,0.568474235311454,0.325929952884052,0.678980343100753,1.17345124144251,0.670025029767263,1.42826184531608,0.780534591431195,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0.54390568381871,0.491764273019036,0.275936746304732,1.76605648986571,2.22702204525186,0.327869890753351,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.668396022247182,0.566153061577665,1.61924280669958,0.584511715822624,0.395287777946524,2.24924921495265,0.283880170416537,0.534196811001766,0.488660878060728,1.48473110675282,0,0.242780636154981,0.302323556964751,0,0,0.922305443831782,0.775284879504663,0,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0.720244376125241,1.94038025674132,1.28602221018955,2.30542303734956,1.96205699362278,1.97458824722545,1.522324745573,0.704015124191131,0,1.10264199027481,0.98931751764888,0.161464426695906,0.542816324353403,0.596861720015682,0.656563598980245,0.291480836629851,1.48340241608408,0.170870880797853,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0,1.10717597753397,0.406638934253697,0.972048067396211,0.627264888043406,0,0.134864346384821,0.330613822901344,0.785267825952089,0.388844919875379,0.621339313086926,7.32800820289447,0.598066184175915,0.66183396182839,1.75006069509643,0.645799117388655,0.844780627453891,0.58678619322877,1.3020438484395,1.15345278868282,8.45544422891021,9.21696020025169,0,0.405450430580328,0.616265742988964,1.29920822977795,0.358053391334963,0.596044064343795,0.480781798079875,0.590758108698309,0.706765149637033,0.990688486514998,0.504130925684203,0.194915761479505,0.384847366561318,0.350630706544707,0.453460767230423,0.221985953374065,0.0897138566094757,0.167884616364078,0.386379188064381,0.375364950902364,1.09890974560359,0.214368379079066,1.00314420807073,2.25900737046827,1.38097570952153,1.71868654031819,2.92150409984269,1.37016503954128,2.2661816921691,0.675022500231806,2.2516060161211,1.35942722695261,0.51776031175182,1.03787347584177,2.39414924040619,0.170733605754134,0.486213434136588,1.25767897576789,1.2869045591501,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0.754505365544305,0.468207537349412,0.512201219238954,0.861532034334199,0.952587382566147,1.62238056322798,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.581385666529314,0.564656282491984,0.592302255241736,0.914639864363863,0.526139422875686,0.543216455383447,0,1.06771516311757,0.492522411877817,1.22769312950907,1.54936841185966,0.578719832943424,0.999242311751784,1.63752125911786,0.214871054048298,0.382576664137687,0.441182838239031,1.62307484934295
|short_description=p2@Iqcc
}}

Revision as of 03:53, 14 September 2013

Short description:p2@Iqcc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Iqcc_5end
Coexpression cluster:MCL_coexpression_mm9:2225
Association with transcript: 12bp_to_ENSMUST00000131559_5end
EntrezGene:Iqcc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Iqcc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain8.08e-2247
future brain8.08e-2247
regional part of brain7.45e-2146
neural tube1.18e-2052
neural rod1.18e-2052
future spinal cord1.18e-2052
neural keel1.18e-2052
regional part of nervous system3.93e-1854
central nervous system1.83e-1773
anterior neural tube3.16e-1740
nervous system1.28e-1675
regional part of forebrain1.34e-1639
forebrain1.34e-1639
future forebrain1.34e-1639
neurectoderm2.22e-1664
neural plate2.22e-1664
presumptive neural plate2.22e-1664
pre-chordal neural plate3.03e-1449
ecto-epithelium8.26e-1373
brain grey matter5.19e-1229
regional part of telencephalon5.19e-1229
telencephalon5.19e-1229
ectoderm-derived structure1.17e-1195
ectoderm1.17e-1195
presumptive ectoderm1.17e-1195
structure with developmental contribution from neural crest2.16e-1192
gray matter3.25e-1134
tube1.90e-10114
anatomical conduit7.22e-10122
cerebral cortex3.52e-0921
cerebral hemisphere3.52e-0921
pallium3.52e-0921
regional part of cerebral cortex3.86e-0917







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