FFCP PHASE1:Mm9::chr4:129296313..129296362,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230767|HGNC=|UniProt=A2ADZ8,A8Y5J7|association_with_transcript=0bp_to_ENSMUST00000046675,ENSMUST00000121442,ENSMUST00000131559,ENSMUST00000146378,NM_198026,uc008uxs.1_5end|description=CAGE_peak_1_at_Iqcc_5end|id=chr4:129296313..129296362,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.09e-12!94;UBERON:0007811!4.63e-12!86;UBERON:0001017!3.62e-11!73;UBERON:0005743!3.62e-11!73;UBERON:0001049!1.38e-10!52;UBERON:0005068!1.38e-10!52;UBERON:0006241!1.38e-10!52;UBERON:0007135!1.38e-10!52;UBERON:0000073!3.82e-10!75;UBERON:0001016!3.82e-10!75;UBERON:0002346!6.31e-10!71;UBERON:0003075!6.31e-10!71;UBERON:0007284!6.31e-10!71;UBERON:0000955!1.00e-09!50;UBERON:0006238!1.00e-09!50;UBERON:0000477!1.84e-09!154;UBERON:0002616!3.22e-09!49;UBERON:0002780!3.99e-09!39;UBERON:0001890!3.99e-09!39;UBERON:0006240!3.99e-09!39;UBERON:0003080!7.24e-09!40;UBERON:0003056!1.73e-08!49;UBERON:0002020!3.32e-08!34;UBERON:0000033!7.44e-08!63;UBERON:0002791!1.81e-07!29;UBERON:0003528!1.81e-07!29;UBERON:0001893!1.81e-07!29;UBERON:0004121!2.77e-07!102;UBERON:0000924!2.77e-07!102;UBERON:0006601!2.77e-07!102;UBERON:0000956!4.00e-07!21;UBERON:0001869!4.00e-07!21;UBERON:0000203!4.00e-07!21;UBERON:0002619!6.40e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.62e-11,73;UBERON:0001049,1.38e-10,52;UBERON:0005068,1.38e-10,52;UBERON:0006241,1.38e-10,52;UBERON:0007135,1.38e-10,52;UBERON:0000955,3.69e-10,47;UBERON:0006238,3.69e-10,47;UBERON:0001016,3.82e-10,75;UBERON:0000073,4.76e-10,54;UBERON:0002616,1.23e-09,46;UBERON:0002346,1.37e-09,64;UBERON:0003075,1.37e-09,64;UBERON:0007284,1.37e-09,64;UBERON:0002780,3.99e-09,39;UBERON:0001890,3.99e-09,39;UBERON:0006240,3.99e-09,39;UBERON:0010314,5.91e-09,92;UBERON:0003080,7.24e-09,40;UBERON:0003056,1.73e-08,49;UBERON:0002020,3.32e-08,34;UBERON:0003528,1.81e-07,29;UBERON:0002791,1.81e-07,29;UBERON:0001893,1.81e-07,29;UBERON:0000956,4.00e-07,21;UBERON:0001869,4.00e-07,21;UBERON:0000203,4.00e-07,21;UBERON:0002619,6.40e-07,17;UBERON:0004121,8.00e-07,95;UBERON:0000924,8.00e-07,95;UBERON:0006601,8.00e-07,95|phase1_expression=9.92922852049723,6.2815573375085,9.09998478779072,3.62957053568196,4.00716583957078,5.87577451691614,8.1764424208434,19.8849918100027,2.39340827657833,3.04283884218592,10.7867319982068,6.54131703761759,22.9408978107816,24.4777126773193,7.66152452176024,9.51633756732182,8.39474253753776,15.930839350591,18.7846774039862,16.1268067683251,23.4719480816953,14.5957698265301,20.8959831311148,12.9593862462659,12.6175104586944,12.6331032105304,7.75371593086335,8.83432054012145,14.6318032981408,14.3657173963161,12.1951780860418,14.6057054895715,12.916360539276,0,6.64358725427932,11.137721239019,7.55426618170766,9.62622750694888,7.0320181007142,14.6586648312664,12.3528612486513,14.3439551841274,13.1087795318411,7.1761186246079,5.06884656097573,7.52541683862894,32.0780451182696,34.2299495517301,31.6348103137639,48.4130448694966,23.5177188330609,33.0630898039435,13.9259563027921,12.3311564141929,12.7715643674136,8.2323019531503,16.6189395164479,19.0798674142654,15.578367486189,14.8117474196169,15.2119536841483,19.3141383279405,12.450127145556,22.9474427906757,20.7661936139065,27.7087244828979,33.2556122675429,56.8643091875901,14.3091664985699,15.9307007231395,17.6672967535161,18.2816630018434,18.7738259808871,15.4338407010842,15.6228117759725,21.1420320920305,15.4162233399144,10.7257363991558,15.6678663921368,16.353899678544,16.3762882048313,11.9810075228055,15.6342479440773,24.7615548413939,18.1829914854404,16.4992007865254,16.5151149726959,14.7255562201987,7.79979791331796,10.6555899750568,12.1743085254705,18.0689014166091,12.2394840067395,26.9851595818909,22.0923981932207,19.7131830322828,22.049773960685,12.2709832256202,14.8078022623635,13.4269038313929,12.9575946194546,23.0987659345772,28.028576367731,0,8.65964164044856,8.61423542615335,6.57181778519218,18.0410529956115,21.7507822263624,18.1099409659086,13.3583701609925,12.7875500891099,17.0655467969483,18.0867168663147,13.8754674420132,15.9596570988688,10.6293836125781,10.9895511259133,6.19227386364912,11.8089800461609,11.9254419968613,14.0613823409214,26.0948465705371,18.1524094147159,10.6817820474862,11.240110429178,5.99075622529601,11.3981518888747,5.84523044536098,13.1815762676244,24.2475319493872,11.3088916901578,18.251553620189,16.3657892691412,13.9217989854905,17.8465389374533,11.4060087512354,13.1871388846699,24.0086620511991,13.6787206326208,15.354212269599,16.5529515192101,12.7844112161798,16.4268251440929,10.6136938676071,15.7579875950365,14.1489604085191,20.1788629176432,11.8562396113063,14.7502742530899,16.1875034230833,12.9325482132269,16.4047877043103,16.716103993064,16.6683530490434,14.52950147775,7.02213187313235,7.46308930632674,6.25159698670304,13.4631752148076,14.0715635988658,12.064158117888,18.4660893756464,16.5281954667819,16.1980468531747,18.1376476905318,12.8771232671817,13.3112490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| ||
|EntrezGene=230767 | |||
|HGNC= | |||
|UniProt=A2ADZ8,A8Y5J7 | |||
|association_with_transcript=0bp_to_ENSMUST00000046675,ENSMUST00000121442,ENSMUST00000131559,ENSMUST00000146378,NM_198026,uc008uxs.1_5end | |||
|description=CAGE_peak_1_at_Iqcc_5end | |||
|id=chr4:129296313..129296362,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.09e-12!94;UBERON:0007811!4.63e-12!86;UBERON:0001017!3.62e-11!73;UBERON:0005743!3.62e-11!73;UBERON:0001049!1.38e-10!52;UBERON:0005068!1.38e-10!52;UBERON:0006241!1.38e-10!52;UBERON:0007135!1.38e-10!52;UBERON:0000073!3.82e-10!75;UBERON:0001016!3.82e-10!75;UBERON:0002346!6.31e-10!71;UBERON:0003075!6.31e-10!71;UBERON:0007284!6.31e-10!71;UBERON:0000955!1.00e-09!50;UBERON:0006238!1.00e-09!50;UBERON:0000477!1.84e-09!154;UBERON:0002616!3.22e-09!49;UBERON:0002780!3.99e-09!39;UBERON:0001890!3.99e-09!39;UBERON:0006240!3.99e-09!39;UBERON:0003080!7.24e-09!40;UBERON:0003056!1.73e-08!49;UBERON:0002020!3.32e-08!34;UBERON:0000033!7.44e-08!63;UBERON:0002791!1.81e-07!29;UBERON:0003528!1.81e-07!29;UBERON:0001893!1.81e-07!29;UBERON:0004121!2.77e-07!102;UBERON:0000924!2.77e-07!102;UBERON:0006601!2.77e-07!102;UBERON:0000956!4.00e-07!21;UBERON:0001869!4.00e-07!21;UBERON:0000203!4.00e-07!21;UBERON:0002619!6.40e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.62e-11,73;UBERON:0001049,1.38e-10,52;UBERON:0005068,1.38e-10,52;UBERON:0006241,1.38e-10,52;UBERON:0007135,1.38e-10,52;UBERON:0000955,3.69e-10,47;UBERON:0006238,3.69e-10,47;UBERON:0001016,3.82e-10,75;UBERON:0000073,4.76e-10,54;UBERON:0002616,1.23e-09,46;UBERON:0002346,1.37e-09,64;UBERON:0003075,1.37e-09,64;UBERON:0007284,1.37e-09,64;UBERON:0002780,3.99e-09,39;UBERON:0001890,3.99e-09,39;UBERON:0006240,3.99e-09,39;UBERON:0010314,5.91e-09,92;UBERON:0003080,7.24e-09,40;UBERON:0003056,1.73e-08,49;UBERON:0002020,3.32e-08,34;UBERON:0003528,1.81e-07,29;UBERON:0002791,1.81e-07,29;UBERON:0001893,1.81e-07,29;UBERON:0000956,4.00e-07,21;UBERON:0001869,4.00e-07,21;UBERON:0000203,4.00e-07,21;UBERON:0002619,6.40e-07,17;UBERON:0004121,8.00e-07,95;UBERON:0000924,8.00e-07,95;UBERON:0006601,8.00e-07,95 | |||
|phase1_expression=9.92922852049723,6.2815573375085,9.09998478779072,3.62957053568196,4.00716583957078,5.87577451691614,8.1764424208434,19.8849918100027,2.39340827657833,3.04283884218592,10.7867319982068,6.54131703761759,22.9408978107816,24.4777126773193,7.66152452176024,9.51633756732182,8.39474253753776,15.930839350591,18.7846774039862,16.1268067683251,23.4719480816953,14.5957698265301,20.8959831311148,12.9593862462659,12.6175104586944,12.6331032105304,7.75371593086335,8.83432054012145,14.6318032981408,14.3657173963161,12.1951780860418,14.6057054895715,12.916360539276,0,6.64358725427932,11.137721239019,7.55426618170766,9.62622750694888,7.0320181007142,14.6586648312664,12.3528612486513,14.3439551841274,13.1087795318411,7.1761186246079,5.06884656097573,7.52541683862894,32.0780451182696,34.2299495517301,31.6348103137639,48.4130448694966,23.5177188330609,33.0630898039435,13.9259563027921,12.3311564141929,12.7715643674136,8.2323019531503,16.6189395164479,19.0798674142654,15.578367486189,14.8117474196169,15.2119536841483,19.3141383279405,12.450127145556,22.9474427906757,20.7661936139065,27.7087244828979,33.2556122675429,56.8643091875901,14.3091664985699,15.9307007231395,17.6672967535161,18.2816630018434,18.7738259808871,15.4338407010842,15.6228117759725,21.1420320920305,15.4162233399144,10.7257363991558,15.6678663921368,16.353899678544,16.3762882048313,11.9810075228055,15.6342479440773,24.7615548413939,18.1829914854404,16.4992007865254,16.5151149726959,14.7255562201987,7.79979791331796,10.6555899750568,12.1743085254705,18.0689014166091,12.2394840067395,26.9851595818909,22.0923981932207,19.7131830322828,22.049773960685,12.2709832256202,14.8078022623635,13.4269038313929,12.9575946194546,23.0987659345772,28.028576367731,0,8.65964164044856,8.61423542615335,6.57181778519218,18.0410529956115,21.7507822263624,18.1099409659086,13.3583701609925,12.7875500891099,17.0655467969483,18.0867168663147,13.8754674420132,15.9596570988688,10.6293836125781,10.9895511259133,6.19227386364912,11.8089800461609,11.9254419968613,14.0613823409214,26.0948465705371,18.1524094147159,10.6817820474862,11.240110429178,5.99075622529601,11.3981518888747,5.84523044536098,13.1815762676244,24.2475319493872,11.3088916901578,18.251553620189,16.3657892691412,13.9217989854905,17.8465389374533,11.4060087512354,13.1871388846699,24.0086620511991,13.6787206326208,15.354212269599,16.5529515192101,12.7844112161798,16.4268251440929,10.6136938676071,15.7579875950365,14.1489604085191,20.1788629176432,11.8562396113063,14.7502742530899,16.1875034230833,12.9325482132269,16.4047877043103,16.716103993064,16.6683530490434,14.52950147775,7.02213187313235,7.46308930632674,6.25159698670304,13.4631752148076,14.0715635988658,12.064158117888,18.4660893756464,16.5281954667819,16.1980468531747,18.1376476905318,12.8771232671817,13.3112490298573,14.4812667923863,17.7300861205423,14.2681104800706,14.7661987299586,16.0271584162467,12.7496097822353,27.7582732104648,18.8315440654091,11.5646574044329,10.0491215332147,13.650448034255,15.3276203427889,13.2733485161756,12.7060620512706,12.4531704553127,12.3646656973163,8.0669940462567,10.8701310117847,10.5560787696113,9.35095418593409,11.1129529657898,9.88701349519644,10.8069024937347,7.76650965692032,16.1217715810119,13.0243304375091,7.88954149711563,13.0336849821001,17.4557238450863,11.6425461017929,16.5047361894312,16.8275568696746,19.4678422523305,12.3397163921801,19.2694207606647,12.5133829287071,10.614185736113,9.44420872016386,8.52012509831712,8.20002343158217,10.6942857748196,13.5217184601881,5.99900339067631,6.31491250332587,4.31304619582064,5.58211421502755,17.78614736753,8.84026072814891,14.8899853223187,7.71909634181387,23.0941487708256,11.5589761179996,12.711268162478,12.0519010900384,17.8364588699262,19.095713348367,15.7108802984769,14.4398899414771,15.1329738341943,13.730810758224,13.5536553358864,22.2854108013404,17.7865531321872,16.9239398540369,19.6028669121054,10.3342079925555,13.277635371514,8.27810238914197,20.7110261084252,12.1900154055891,8.6885521049638,7.06918596172244,12.6203287766503,12.8844785617891,12.9254038639679,15.0550342710108,15.3731085116852,10.190755108398,11.7395103485719,19.2888866221466,16.2067988958075,29.5615611108062,21.5748929516568,14.9575107080494,10.2618784392753,23.095817216155,7.96470830039777,15.0523994416088,10.883648050731,11.3163047853539,11.8120757152309,12.2974059177571,9.30341855405596,7.63420831902762,12.1209108650805,7.26884543252377,8.4334886859999,1.03135543248187,21.4476951624886,18.546292685225,17.9808570458029,15.4322665222746,24.2956120089915,15.8748247665843,20.7331765958672,14.3098526083862,8.91752490642099,8.89694697628045,15.6575162619023,10.8824926941377,12.4327608555847,11.8816462108467,9.07229814423837,8.37118588699812,8.16146342563582,16.3174265769249,15.7201210334024,15.4790150972417,17.7786746274923,11.3021074202815,13.5327285443815,9.60868327467395,3.90950388985867,5.318155188299,4.28419918793714,15.2747298882418,14.5514557047322,14.84232110026,12.6366248761507,1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| |||
|short_description=p1@Iqcc | |||
}} |
Revision as of 03:53, 14 September 2013
Short description: | p1@Iqcc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Iqcc_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000046675, ENSMUST00000121442, ENSMUST00000131559, ENSMUST00000146378, NM_198026, uc008uxs.1_5end |
EntrezGene: | Iqcc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.62e-11 | 73 |
neural tube | 1.38e-10 | 52 |
neural rod | 1.38e-10 | 52 |
future spinal cord | 1.38e-10 | 52 |
neural keel | 1.38e-10 | 52 |
brain | 3.69e-10 | 47 |
future brain | 3.69e-10 | 47 |
nervous system | 3.82e-10 | 75 |
regional part of nervous system | 4.76e-10 | 54 |
regional part of brain | 1.23e-09 | 46 |
neurectoderm | 1.37e-09 | 64 |
neural plate | 1.37e-09 | 64 |
presumptive neural plate | 1.37e-09 | 64 |
regional part of forebrain | 3.99e-09 | 39 |
forebrain | 3.99e-09 | 39 |
future forebrain | 3.99e-09 | 39 |
structure with developmental contribution from neural crest | 5.91e-09 | 92 |
anterior neural tube | 7.24e-09 | 40 |
pre-chordal neural plate | 1.73e-08 | 49 |
gray matter | 3.32e-08 | 34 |
brain grey matter | 1.81e-07 | 29 |
regional part of telencephalon | 1.81e-07 | 29 |
telencephalon | 1.81e-07 | 29 |
cerebral cortex | 4.00e-07 | 21 |
cerebral hemisphere | 4.00e-07 | 21 |
pallium | 4.00e-07 | 21 |
regional part of cerebral cortex | 6.40e-07 | 17 |
ectoderm-derived structure | 8.00e-07 | 95 |
ectoderm | 8.00e-07 | 95 |
presumptive ectoderm | 8.00e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.