FFCP PHASE1:Mm9::chr7:137836187..137836256,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57752|HGNC=|MCL_coexpression_id=13|UniProt=E9QL08,Q9JJG0|association_with_transcript=117bp_to_ENSMUST00000033141,NM_021314,uc009kak.1,uc009kal.1,uc009kam.1_5end|description=CAGE_peak_2_at_Tacc2_5end|id=chr7:137836187..137836256,+|ontology_enrichment_celltype=CL:0000540!3.53e-15!33;CL:0000047!3.53e-15!33;CL:0000031!3.53e-15!33;CL:0000404!3.53e-15!33;CL:0000393!4.93e-14!39;CL:0000211!4.93e-14!39;CL:0000117!1.17e-13!23;CL:0000337!1.17e-13!23;CL:0000221!3.32e-13!44;CL:0000133!3.32e-13!44;CL:0002319!3.49e-13!43;CL:0000055!8.98e-12!50|ontology_enrichment_celltype_v019_2=CL:0000540,7.32e-16,33;CL:0000047,7.32e-16,33;CL:0000031,7.32e-16,33;CL:0000404,7.32e-16,33;CL:0000393,1.76e-14,39;CL:0000211,1.76e-14,39;CL:0000117,2.90e-14,23;CL:0000337,2.90e-14,23;CL:0000221,1.92e-13,44;CL:0000133,1.92e-13,44;CL:0002319,2.04e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.14e-32!73;UBERON:0005743!6.14e-32!73;UBERON:0000073!2.23e-30!75;UBERON:0001016!2.23e-30!75;UBERON:0004121!7.52e-27!102;UBERON:0000924!7.52e-27!102;UBERON:0006601!7.52e-27!102;UBERON:0002346!6.83e-25!71;UBERON:0003075!6.83e-25!71;UBERON:0007284!6.83e-25!71;UBERON:0001049!1.05e-24!52;UBERON:0005068!1.05e-24!52;UBERON:0006241!1.05e-24!52;UBERON:0007135!1.05e-24!52;UBERON:0000955!2.65e-23!50;UBERON:0006238!2.65e-23!50;UBERON:0000033!5.95e-23!63;UBERON:0002616!9.25e-23!49;UBERON:0003056!5.30e-20!49;UBERON:0002020!7.47e-19!34;UBERON:0003080!8.87e-19!40;UBERON:0002780!3.37e-18!39;UBERON:0001890!3.37e-18!39;UBERON:0006240!3.37e-18!39;UBERON:0000153!6.90e-17!94;UBERON:0002791!5.21e-16!29;UBERON:0003528!5.21e-16!29;UBERON:0001893!5.21e-16!29;UBERON:0007811!1.32e-15!86;UBERON:0000956!1.95e-11!21;UBERON:0001869!1.95e-11!21;UBERON:0000203!1.95e-11!21;UBERON:0002619!2.89e-09!17;UBERON:0002021!1.25e-07!10;UBERON:0000411!1.25e-07!10;UBERON:0001950!1.25e-07!10;UBERON:0000025!5.52e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-33,73;UBERON:0001016,2.16e-31,75;UBERON:0004121,1.77e-28,95;UBERON:0000924,1.77e-28,95;UBERON:0006601,1.77e-28,95;UBERON:0002346,1.30e-27,64;UBERON:0003075,1.30e-27,64;UBERON:0007284,1.30e-27,64;UBERON:0000073,4.76e-27,54;UBERON:0001049,7.22e-26,52;UBERON:0005068,7.22e-26,52;UBERON:0006241,7.22e-26,52;UBERON:0007135,7.22e-26,52;UBERON:0010371,2.08e-25,73;UBERON:0000955,1.09e-22,47;UBERON:0006238,1.09e-22,47;UBERON:0002616,3.98e-22,46;UBERON:0003056,6.28e-21,49;UBERON:0002020,1.01e-19,34;UBERON:0003080,1.21e-19,40;UBERON:0010314,3.60e-19,92;UBERON:0002780,4.93e-19,39;UBERON:0001890,4.93e-19,39;UBERON:0006240,4.93e-19,39;UBERON:0003528,9.82e-17,29;UBERON:0002791,9.82e-17,29;UBERON:0001893,9.82e-17,29;UBERON:0000956,6.22e-12,21;UBERON:0001869,6.22e-12,21;UBERON:0000203,6.22e-12,21;UBERON:0002619,1.19e-09,17;UBERON:0002021,6.20e-08,10;UBERON:0000411,6.20e-08,10;UBERON:0001950,6.20e-08,10;UBERON:0003076,9.11e-07,12;UBERON:0003057,9.11e-07,12|phase1_expression=10.5698239089164,0,0,0,0,0,0.233612640595526,0.645616617207881,0,0.234064526321993,0,0.0797721589953364,0.513602189793617,0.34968160967599,0,0,0,0.315462165358238,0.137114433605739,0,7.39876624314307,1.19149141441062,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,5.5757312170733,4.40512205188036,7.04152209913235,1.96222640742402,1.5378032791413,1.36100929351998,3.3596741190087,4.31257693094915,0,0.725362142011344,0,1.28629718017973,0.286533439938757,2.57836046138721,36.6192794155872,44.9642332381228,38.0298842103708,8.4711133017283,4.4464739805557,0.449949858640699,0,0,5.39280198933128,5.76327457982332,22.1895770340142,23.6260392080459,20.6118462124354,22.2807767834967,17.4486147351775,26.2130310320002,23.2904494574314,28.4957823849107,15.4162233399144,21.8345348125671,21.9657342556428,36.5325017012637,36.2291068665542,27.6084086395083,15.355064945076,12.380777420697,17.4190002465564,27.9897156199984,24.915044139843,31.1287074528252,0.227178579999552,0.453429360640713,0.869593466105033,0,0,0,0,0,1.40444420131752,0,0,0.35333957451034,3.94361575374705,0,2.54805239706646,0,0,0,0,1.59857431606684,0,1.03909497345377,3.64319186208885,4.87144765299426,2.53677046981664,2.26083960828934,3.41007250693544,0.376999773989026,0.988779870937496,0.433798070759735,0,1.61766849947409,0.220841518460394,0.484875253135222,0,60.6056249813903,41.889341362691,0,0,0,0,23.666921025962,37.5150494311274,56.6701128029018,40.1534179644159,22.5029602450691,23.4800490352303,22.7137768294861,5.6011650117674,0.746441823660558,0.505445516867349,2.10441855886474,5.85541993332167,4.36813998423599,7.92273371143537,5.27466862425003,7.68812440410005,8.71173297936978,5.24729657534481,4.39795730256327,5.6047678162539,10.2117283290622,11.0849208223288,8.11024209982027,8.89751197521913,3.1342694986995,3.49829631893504,3.38358253591438,0,0,0,7.87077935634907,3.51789089971644,1.98068267607116,3.55117103377815,2.75469924446365,2.00547246753592,0.930135779001631,0.804820204198858,1.75148013550754,1.48103864922132,0.820837320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| ||
|EntrezGene=57752 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=E9QL08,Q9JJG0 | |||
|association_with_transcript=117bp_to_ENSMUST00000033141,NM_021314,uc009kak.1,uc009kal.1,uc009kam.1_5end | |||
|description=CAGE_peak_2_at_Tacc2_5end | |||
|id=chr7:137836187..137836256,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.53e-15!33;CL:0000047!3.53e-15!33;CL:0000031!3.53e-15!33;CL:0000404!3.53e-15!33;CL:0000393!4.93e-14!39;CL:0000211!4.93e-14!39;CL:0000117!1.17e-13!23;CL:0000337!1.17e-13!23;CL:0000221!3.32e-13!44;CL:0000133!3.32e-13!44;CL:0002319!3.49e-13!43;CL:0000055!8.98e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.32e-16,33;CL:0000047,7.32e-16,33;CL:0000031,7.32e-16,33;CL:0000404,7.32e-16,33;CL:0000393,1.76e-14,39;CL:0000211,1.76e-14,39;CL:0000117,2.90e-14,23;CL:0000337,2.90e-14,23;CL:0000221,1.92e-13,44;CL:0000133,1.92e-13,44;CL:0002319,2.04e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.14e-32!73;UBERON:0005743!6.14e-32!73;UBERON:0000073!2.23e-30!75;UBERON:0001016!2.23e-30!75;UBERON:0004121!7.52e-27!102;UBERON:0000924!7.52e-27!102;UBERON:0006601!7.52e-27!102;UBERON:0002346!6.83e-25!71;UBERON:0003075!6.83e-25!71;UBERON:0007284!6.83e-25!71;UBERON:0001049!1.05e-24!52;UBERON:0005068!1.05e-24!52;UBERON:0006241!1.05e-24!52;UBERON:0007135!1.05e-24!52;UBERON:0000955!2.65e-23!50;UBERON:0006238!2.65e-23!50;UBERON:0000033!5.95e-23!63;UBERON:0002616!9.25e-23!49;UBERON:0003056!5.30e-20!49;UBERON:0002020!7.47e-19!34;UBERON:0003080!8.87e-19!40;UBERON:0002780!3.37e-18!39;UBERON:0001890!3.37e-18!39;UBERON:0006240!3.37e-18!39;UBERON:0000153!6.90e-17!94;UBERON:0002791!5.21e-16!29;UBERON:0003528!5.21e-16!29;UBERON:0001893!5.21e-16!29;UBERON:0007811!1.32e-15!86;UBERON:0000956!1.95e-11!21;UBERON:0001869!1.95e-11!21;UBERON:0000203!1.95e-11!21;UBERON:0002619!2.89e-09!17;UBERON:0002021!1.25e-07!10;UBERON:0000411!1.25e-07!10;UBERON:0001950!1.25e-07!10;UBERON:0000025!5.52e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-33,73;UBERON:0001016,2.16e-31,75;UBERON:0004121,1.77e-28,95;UBERON:0000924,1.77e-28,95;UBERON:0006601,1.77e-28,95;UBERON:0002346,1.30e-27,64;UBERON:0003075,1.30e-27,64;UBERON:0007284,1.30e-27,64;UBERON:0000073,4.76e-27,54;UBERON:0001049,7.22e-26,52;UBERON:0005068,7.22e-26,52;UBERON:0006241,7.22e-26,52;UBERON:0007135,7.22e-26,52;UBERON:0010371,2.08e-25,73;UBERON:0000955,1.09e-22,47;UBERON:0006238,1.09e-22,47;UBERON:0002616,3.98e-22,46;UBERON:0003056,6.28e-21,49;UBERON:0002020,1.01e-19,34;UBERON:0003080,1.21e-19,40;UBERON:0010314,3.60e-19,92;UBERON:0002780,4.93e-19,39;UBERON:0001890,4.93e-19,39;UBERON:0006240,4.93e-19,39;UBERON:0003528,9.82e-17,29;UBERON:0002791,9.82e-17,29;UBERON:0001893,9.82e-17,29;UBERON:0000956,6.22e-12,21;UBERON:0001869,6.22e-12,21;UBERON:0000203,6.22e-12,21;UBERON:0002619,1.19e-09,17;UBERON:0002021,6.20e-08,10;UBERON:0000411,6.20e-08,10;UBERON:0001950,6.20e-08,10;UBERON:0003076,9.11e-07,12;UBERON:0003057,9.11e-07,12 | |||
|phase1_expression=10.5698239089164,0,0,0,0,0,0.233612640595526,0.645616617207881,0,0.234064526321993,0,0.0797721589953364,0.513602189793617,0.34968160967599,0,0,0,0.315462165358238,0.137114433605739,0,7.39876624314307,1.19149141441062,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,5.5757312170733,4.40512205188036,7.04152209913235,1.96222640742402,1.5378032791413,1.36100929351998,3.3596741190087,4.31257693094915,0,0.725362142011344,0,1.28629718017973,0.286533439938757,2.57836046138721,36.6192794155872,44.9642332381228,38.0298842103708,8.4711133017283,4.4464739805557,0.449949858640699,0,0,5.39280198933128,5.76327457982332,22.1895770340142,23.6260392080459,20.6118462124354,22.2807767834967,17.4486147351775,26.2130310320002,23.2904494574314,28.4957823849107,15.4162233399144,21.8345348125671,21.9657342556428,36.5325017012637,36.2291068665542,27.6084086395083,15.355064945076,12.380777420697,17.4190002465564,27.9897156199984,24.915044139843,31.1287074528252,0.227178579999552,0.453429360640713,0.869593466105033,0,0,0,0,0,1.40444420131752,0,0,0.35333957451034,3.94361575374705,0,2.54805239706646,0,0,0,0,1.59857431606684,0,1.03909497345377,3.64319186208885,4.87144765299426,2.53677046981664,2.26083960828934,3.41007250693544,0.376999773989026,0.988779870937496,0.433798070759735,0,1.61766849947409,0.220841518460394,0.484875253135222,0,60.6056249813903,41.889341362691,0,0,0,0,23.666921025962,37.5150494311274,56.6701128029018,40.1534179644159,22.5029602450691,23.4800490352303,22.7137768294861,5.6011650117674,0.746441823660558,0.505445516867349,2.10441855886474,5.85541993332167,4.36813998423599,7.92273371143537,5.27466862425003,7.68812440410005,8.71173297936978,5.24729657534481,4.39795730256327,5.6047678162539,10.2117283290622,11.0849208223288,8.11024209982027,8.89751197521913,3.1342694986995,3.49829631893504,3.38358253591438,0,0,0,7.87077935634907,3.51789089971644,1.98068267607116,3.55117103377815,2.75469924446365,2.00547246753592,0.930135779001631,0.804820204198858,1.75148013550754,1.48103864922132,0.820837320395476,1.13496333364198,0.438599962275997,0.439100230582101,0.939444931322602,40.5859600728766,30.4597652642682,0,0,4.69234151177515,4.64473343720877,2.57734922644187,1.61346819698674,1.11189021922435,1.33157938278791,0,0.494096864172033,0.251335208800269,1.59165177632921,0.779856348476481,0,0,0.199141273254367,4.74169752382704,3.31320686568214,3.38123207019241,3.46207257337034,2.13347735884388,4.34842083319975,1.45444035385792,0.295220295959204,0.31399745568275,0.246794327843601,0,1.66845105716094,0.393117990226406,0.674586337154561,0.202860121388503,0.241177159752417,0,0.575392274901621,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.252578877947112,0.179397413521912,0,0,4.54779388249163,3.58522948172457,1.18821560042632,2.11221223459652,1.17254380209271,1.90434912708811,0.585400943573396,0.788175720530955,2.21464689648775,1.59454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,15.0917554588524,14.8858841972098,0.491804836130026,1.00988370881749,4.41711507182759,3.51394869866975,6.24727853425117,8.12493913038677,6.23836287430704,4.52922449262132,6.07216052512342,6.72188473196017,7.11518000303742,19.6006003017302,0.851640511249612,5.1639025063504,4.72372182125371,1.97964147567043,0,1.94224508923985,2.11626489875326,2.64047111658257,1.47650946440386,3.99665692327106,1.03371317267288,2.90826983582004,2.13898427030833,1.26414703174326,0,0,2.38307724027652,6.30213829109586,4.91562998374467,6.64444808597936,6.56158864476412,8.56170324489939,4.27827453565514,9.13394847343798,0.23467170806371,0.21183207086382,0,1.81374878235628,3.39075296061402,3.01564624640779,2.26807453605959,2.46211349617592,0,18.17167959703,0,2.06386867963222,0.370389054739423,0,0,0,0.169978429993855,0,0.138199973804424,0,7.11755985557555,3.25311147402958,1.83609079397062,1.88179466413022,1.31017538247707,0.404593039154462,1.90102948168273,0,0.129614973291793,0,0,4.9340460194513,1.48912641411388,2.91676782516071,3.61647505737647,3.71703476079712,5.75050469364194,4.1665403150064,1.8874681996628,0.483168241652012,0.576060012515731,1.26404448251271,2.63542779877213,2.77319584345034,2.20865399062252,1.43221356533985,3.57626438606277,2.64429988943931,2.65841148914239,2.3222283488074,4.11516755936999,2.52065462842101,3.11865218367208,1.15454209968395,1.98690733708667,0,0,0,0.671538465456314,0.772758376128762,0.563047426353546,2.74727436400898,1.2862102744744,0,39.5326289831947,39.5879703396172,40.6755814541972,35.745461927487,27.4033007908257,29.4603619981983,29.7009900101995,37.3766598676103,30.8136838109259,39.8675440048901,4.4628559461196,11.1726964552289,10.0732827394939,6.80698807791223,7.75568701723535,9.19217542250071,7.11189528965169,5.97501665992793,6.09746498224449,8.59170519996911,9.63221339582911,8.67681170375951,6.55490552289177,7.17081706934536,7.86865924691902,9.0495801343784,6.37363792696705,5.20854895252004,3.29668720642645,5.88795680537589,5.8287772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| |||
|short_description=p2@Tacc2 | |||
}} |
Revision as of 12:03, 14 September 2013
Short description: | p2@Tacc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 117bp_to_ENSMUST00000033141, NM_021314, uc009kak.1, uc009kal.1, uc009kam.1_5end |
EntrezGene: | Tacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.32e-16 | 33 |
neuronal stem cell | 7.32e-16 | 33 |
neuroblast | 7.32e-16 | 33 |
electrically signaling cell | 7.32e-16 | 33 |
electrically responsive cell | 1.76e-14 | 39 |
electrically active cell | 1.76e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.90e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.90e-14 | 23 |
ectodermal cell | 1.92e-13 | 44 |
neurectodermal cell | 1.92e-13 | 44 |
neural cell | 2.04e-13 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.