FFCP PHASE1:Hg19::chrX:71526813..71526840,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4435|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1986|TSSclassifier=S|UniProt=Q99966|association_with_transcript=0bp_to_ENST00000246139,NM_004143,uc004eas.2_5end|description=CAGE_peak_4_at_CITED1_5end|id=chrX:71526813..71526840,-|ontology_enrichment_celltype=CL:0000133!2.99e-10!59;CL:0000333!8.57e-09!41;CL:0000221!8.46e-08!71;CL:0002319!1.11e-07!25;CL:0000148!1.36e-07!10;CL:0000541!1.36e-07!10|ontology_enrichment_celltype_v019=CL:0000148;4.64e-13;10!CL:0000147;5.25e-09;14!CL:0002567;1.02e-08;3!CL:0000710;1.14e-07;20|ontology_enrichment_celltype_v019_2=CL:0000148,4.48e-13,10;CL:0000541,4.48e-13,10;CL:0000133,8.94e-12,59;CL:0000333,1.20e-09,41;CL:0000147,5.13e-09,14;CL:0000221,6.99e-09,72;CL:0002567,1.04e-08,3;CL:0000710,1.26e-07,20|ontology_enrichment_development_v019=UBERON:0006601;2.12e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;7.66e-08;6|ontology_enrichment_disease_v019_2=DOID:169,7.85e-08,6|ontology_enrichment_uberon=UBERON:0000073!1.27e-27!94;UBERON:0001016!1.27e-27!94;UBERON:0001017!2.00e-26!82;UBERON:0005743!2.45e-25!86;UBERON:0000955!2.61e-24!69;UBERON:0006238!2.61e-24!69;UBERON:0000924!5.75e-21!173;UBERON:0006601!5.75e-21!173;UBERON:0004121!2.43e-20!169;UBERON:0002780!4.42e-20!41;UBERON:0001890!4.42e-20!41;UBERON:0006240!4.42e-20!41;UBERON:0001049!1.05e-19!57;UBERON:0005068!1.05e-19!57;UBERON:0006241!1.05e-19!57;UBERON:0007135!1.05e-19!57;UBERON:0003080!2.74e-19!42;UBERON:0002616!1.70e-18!59;UBERON:0001869!9.91e-18!32;UBERON:0001893!2.41e-17!34;UBERON:0002020!3.98e-17!34;UBERON:0003528!3.98e-17!34;UBERON:0002619!5.27e-17!22;UBERON:0002791!1.63e-16!33;UBERON:0002346!4.30e-16!90;UBERON:0000033!9.63e-16!123;UBERON:0001950!1.33e-15!20;UBERON:0003075!1.46e-15!86;UBERON:0007284!1.46e-15!86;UBERON:0000153!2.44e-15!129;UBERON:0007811!2.44e-15!129;UBERON:0000956!3.85e-15!25;UBERON:0000203!3.85e-15!25;UBERON:0003056!5.62e-14!61;UBERON:0007023!1.04e-10!115|ontology_enrichment_uberon_v019=UBERON:0002619;1.25e-20;22!UBERON:0001950;1.41e-19;20!UBERON:0000956;7.77e-18;25!UBERON:0000203;7.77e-18;25!UBERON:0002780;5.71e-17;41!UBERON:0001890;5.71e-17;41!UBERON:0001869;1.63e-16;32!UBERON:0001893;2.02e-15;34!UBERON:0002791;2.74e-14;32!UBERON:0003528;3.40e-13;34!UBERON:0002020;3.40e-13;34!UBERON:0003296;1.12e-12;4!UBERON:0010133;1.12e-12;4!UBERON:0000073;3.72e-11;53!UBERON:0002616;3.72e-11;53!UBERON:0001894;1.67e-10;7!UBERON:0000955;2.06e-10;68!UBERON:0001016;8.97e-10;83!UBERON:0001017;3.84e-09;75!UBERON:0001872;9.09e-09;5!UBERON:0000200;1.28e-07;6!UBERON:0000007;2.26e-07;2!UBERON:0001905;5.71e-07;2!UBERON:0002757;5.71e-07;2!UBERON:0010134;5.71e-07;2!UBERON:0005408;5.71e-07;2!UBERON:0001899;5.71e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.95e-28,89;UBERON:0001017,3.56e-24,81;UBERON:0002780,3.62e-24,41;UBERON:0001890,3.62e-24,41;UBERON:0003080,3.62e-24,41;UBERON:0006240,3.62e-24,41;UBERON:0002619,9.59e-21,22;UBERON:0000955,3.59e-20,68;UBERON:0006238,3.59e-20,68;UBERON:0001950,1.03e-19,20;UBERON:0000073,2.41e-19,53;UBERON:0002616,2.41e-19,53;UBERON:0001049,5.19e-18,56;UBERON:0005068,5.19e-18,56;UBERON:0006241,5.19e-18,56;UBERON:0007135,5.19e-18,56;UBERON:0003056,5.98e-18,61;UBERON:0000956,6.15e-18,25;UBERON:0000203,6.15e-18,25;UBERON:0001869,1.01e-17,32;UBERON:0001893,1.80e-16,34;UBERON:0002791,2.04e-15,32;UBERON:0004121,3.20e-15,171;UBERON:0000924,3.20e-15,171;UBERON:0006601,3.20e-15,171;UBERON:0003528,2.55e-14,34;UBERON:0002020,2.55e-14,34;UBERON:0010371,2.22e-13,104;UBERON:0003075,4.39e-13,82;UBERON:0007284,4.39e-13,82;UBERON:0003296,1.03e-12,4;UBERON:0010133,1.03e-12,4;UBERON:0002346,3.38e-12,86;UBERON:0007023,1.42e-11,114;UBERON:0001894,2.14e-10,7;UBERON:0006222,2.14e-10,7;UBERON:0011216,9.45e-09,223;UBERON:0001872,9.96e-09,5;UBERON:0010314,2.99e-08,132;UBERON:0000200,6.56e-08,6;UBERON:0000007,2.31e-07,2;UBERON:0001905,5.11e-07,2;UBERON:0002757,5.11e-07,2;UBERON:0010134,5.11e-07,2;UBERON:0005408,5.11e-07,2;UBERON:0001899,5.11e-07,2|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.609868530647977,0.265059536642971,0.232387885739037,0.518305275076852,0,0.72995471815166,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4435 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1986 | |||
|TSSclassifier=S | |||
|UniProt=Q99966 | |||
|association_with_transcript=0bp_to_ENST00000246139,NM_004143,uc004eas.2_5end | |||
|description=CAGE_peak_4_at_CITED1_5end | |||
|id=chrX:71526813..71526840,- | |||
|ontology_enrichment_celltype=CL:0000133!2.99e-10!59;CL:0000333!8.57e-09!41;CL:0000221!8.46e-08!71;CL:0002319!1.11e-07!25;CL:0000148!1.36e-07!10;CL:0000541!1.36e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.64e-13;10!CL:0000147;5.25e-09;14!CL:0002567;1.02e-08;3!CL:0000710;1.14e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.48e-13,10;CL:0000541,4.48e-13,10;CL:0000133,8.94e-12,59;CL:0000333,1.20e-09,41;CL:0000147,5.13e-09,14;CL:0000221,6.99e-09,72;CL:0002567,1.04e-08,3;CL:0000710,1.26e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.12e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;7.66e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.85e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.27e-27!94;UBERON:0001016!1.27e-27!94;UBERON:0001017!2.00e-26!82;UBERON:0005743!2.45e-25!86;UBERON:0000955!2.61e-24!69;UBERON:0006238!2.61e-24!69;UBERON:0000924!5.75e-21!173;UBERON:0006601!5.75e-21!173;UBERON:0004121!2.43e-20!169;UBERON:0002780!4.42e-20!41;UBERON:0001890!4.42e-20!41;UBERON:0006240!4.42e-20!41;UBERON:0001049!1.05e-19!57;UBERON:0005068!1.05e-19!57;UBERON:0006241!1.05e-19!57;UBERON:0007135!1.05e-19!57;UBERON:0003080!2.74e-19!42;UBERON:0002616!1.70e-18!59;UBERON:0001869!9.91e-18!32;UBERON:0001893!2.41e-17!34;UBERON:0002020!3.98e-17!34;UBERON:0003528!3.98e-17!34;UBERON:0002619!5.27e-17!22;UBERON:0002791!1.63e-16!33;UBERON:0002346!4.30e-16!90;UBERON:0000033!9.63e-16!123;UBERON:0001950!1.33e-15!20;UBERON:0003075!1.46e-15!86;UBERON:0007284!1.46e-15!86;UBERON:0000153!2.44e-15!129;UBERON:0007811!2.44e-15!129;UBERON:0000956!3.85e-15!25;UBERON:0000203!3.85e-15!25;UBERON:0003056!5.62e-14!61;UBERON:0007023!1.04e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.25e-20;22!UBERON:0001950;1.41e-19;20!UBERON:0000956;7.77e-18;25!UBERON:0000203;7.77e-18;25!UBERON:0002780;5.71e-17;41!UBERON:0001890;5.71e-17;41!UBERON:0001869;1.63e-16;32!UBERON:0001893;2.02e-15;34!UBERON:0002791;2.74e-14;32!UBERON:0003528;3.40e-13;34!UBERON:0002020;3.40e-13;34!UBERON:0003296;1.12e-12;4!UBERON:0010133;1.12e-12;4!UBERON:0000073;3.72e-11;53!UBERON:0002616;3.72e-11;53!UBERON:0001894;1.67e-10;7!UBERON:0000955;2.06e-10;68!UBERON:0001016;8.97e-10;83!UBERON:0001017;3.84e-09;75!UBERON:0001872;9.09e-09;5!UBERON:0000200;1.28e-07;6!UBERON:0000007;2.26e-07;2!UBERON:0001905;5.71e-07;2!UBERON:0002757;5.71e-07;2!UBERON:0010134;5.71e-07;2!UBERON:0005408;5.71e-07;2!UBERON:0001899;5.71e-07;2 | |||
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| |||
|short_description=p4@CITED1 | |||
}} |
Revision as of 12:29, 14 September 2013
Short description: | p4@CITED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CITED1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000246139, NM_004143, uc004eas.2_5end |
EntrezGene: | CITED1 |
HGNC: | 1986 |
UniProt: | Q99966 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.48e-13 | 10 |
melanoblast | 4.48e-13 | 10 |
neurectodermal cell | 8.94e-12 | 59 |
migratory neural crest cell | 1.20e-09 | 41 |
pigment cell | 5.13e-09 | 14 |
ectodermal cell | 6.99e-09 | 72 |
light melanocyte | 1.04e-08 | 3 |
neurecto-epithelial cell | 1.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.85e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.