Personal tools

FFCP PHASE1:Mm9::chr8:11727817..11727831,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=54126|HGNC=|UniProt=Q9ES28|association_with_transcript=-273bp_to_ENSMUST00000033908,ENSMUST00000110909,NM_001113517,uc009kvu.2,uc009kvv.2_5end|description=CAGE_peak_12_at_Arhgef7_5end|id=chr8:11727817..11727831,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,2.49e-16,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!2.44e-10!21;UBERON:0001869!2.44e-10!21;UBERON:0000203!2.44e-10!21;UBERON:0002020!1.50e-09!34;UBERON:0000025!2.10e-09!114;UBERON:0002791!3.16e-09!29;UBERON:0003528!3.16e-09!29;UBERON:0001893!3.16e-09!29;UBERON:0004111!1.37e-08!122;UBERON:0003056!9.13e-08!49;UBERON:0002619!1.24e-07!17;UBERON:0000033!1.84e-07!63;UBERON:0002346!6.14e-07!71;UBERON:0003075!6.14e-07!71;UBERON:0007284!6.14e-07!71;UBERON:0000955!7.30e-07!50;UBERON:0006238!7.30e-07!50;UBERON:0003080!9.60e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.55e-24,21;UBERON:0001869,2.55e-24,21;UBERON:0000203,2.55e-24,21;UBERON:0003528,5.15e-17,29;UBERON:0002791,5.15e-17,29;UBERON:0001893,5.15e-17,29;UBERON:0002619,9.13e-17,17;UBERON:0010314,1.40e-14,92;UBERON:0002020,3.42e-14,34;UBERON:0007100,3.87e-12,18;UBERON:0000948,3.87e-12,18;UBERON:0005498,3.87e-12,18;UBERON:0004140,3.87e-12,18;UBERON:0009881,3.87e-12,18;UBERON:0004141,3.87e-12,18;UBERON:0003084,3.87e-12,18;UBERON:0007005,3.87e-12,18;UBERON:0004139,3.87e-12,18;UBERON:0004291,3.87e-12,18;UBERON:0002780,4.31e-12,39;UBERON:0001890,4.31e-12,39;UBERON:0006240,4.31e-12,39;UBERON:0003080,9.80e-12,40;UBERON:0000955,1.67e-11,47;UBERON:0006238,1.67e-11,47;UBERON:0003056,8.53e-11,49;UBERON:0002616,6.42e-10,46;UBERON:0000025,7.70e-10,114;UBERON:0002021,2.86e-09,10;UBERON:0000411,2.86e-09,10;UBERON:0001950,2.86e-09,10;UBERON:0004535,2.94e-09,23;UBERON:0001009,2.94e-09,23;UBERON:0001954,5.25e-09,7;UBERON:0003022,5.25e-09,7;UBERON:0002421,5.25e-09,7;UBERON:0000349,5.25e-09,7;UBERON:0002600,5.25e-09,7;UBERON:0004111,5.93e-09,122;UBERON:0001049,1.60e-08,52;UBERON:0005068,1.60e-08,52;UBERON:0006241,1.60e-08,52;UBERON:0007135,1.60e-08,52;UBERON:0000073,3.98e-08,54;UBERON:0002346,1.05e-07,64;UBERON:0003075,1.05e-07,64;UBERON:0007284,1.05e-07,64;UBERON:0010371,1.34e-07,73;UBERON:0000483,9.40e-07,174|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,1.65903379693564,3.24014251996058,2.52389953621658,0.285650984403804,0.441737081903227,2.32732518508413,1.53352753629178,0.919218786610021,0,0.127687338085188,0.307213066512487,0.923204014111357,0.640413505216868,0.52091337055676,0,0,0,0,0.427115042397309,0.372798891650601,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.502617408451458,0.521472960576829,0.511430914660661,0.83115217823824,0,0.101839363850316,0.124406970610093,0,0,0,0.459804208866946,0.540186389416048,0,0.408218994907967,1.0249097622788,0.937017245597288,0.517406741478031,0.646703978798527,0,0.351902248327898,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0.540186184383045,0.710234206755631,0.787056926989615,0.925602677324269,1.39520366850245,2.68273401399619,1.5179494507732,1.6455984991348,0.492502392237286,2.35099547682982,1.46199987425332,1.09775057645525,1.61047702512446,1.68231958851302,1.9551876352064,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0.505157755894224,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0.780534591431195,0.788175720530955,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0,0.757412781613119,0.94652465824877,0,0.861693590931196,0.238968797952552,0.222798674082394,0,0,0,0,1.92792789853084,0.283880170416537,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0,0,0,0,0,0,0,1.13025098687134,0.301564624640779,0.477489376012546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,2.82375921308533,0.920650473014354,0.572895513439397,1.71853182343688,2.05524755931193,0,1.35004500046361,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,0.760437899670719,1.50901073108861,0.468207537349412,0.512201219238954,0.631790158511746,0.476293691283074,0.463537303779422,0.77163688185482,0,0.883193520806384,0,0.177475806159338,0,0.726732083161643,0.470546902076653,0.592302255241736,0.548783918618318,0.789209134313529,0.407412341537585,0,0.474540072496697,0.492522411877817,0.818462086339379,0.619747364743864,0.192906610981141,0.749431733813838,0.233931608445408,0.859484216193193,0.956441660344217,0.441182838239031,0|short_description=p12@Arhgef7}}
|EntrezGene=54126
|HGNC=
|UniProt=Q9ES28
|association_with_transcript=-273bp_to_ENSMUST00000033908,ENSMUST00000110909,NM_001113517,uc009kvu.2,uc009kvv.2_5end
|description=CAGE_peak_12_at_Arhgef7_5end
|id=chr8:11727817..11727831,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,2.49e-16,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000956!2.44e-10!21;UBERON:0001869!2.44e-10!21;UBERON:0000203!2.44e-10!21;UBERON:0002020!1.50e-09!34;UBERON:0000025!2.10e-09!114;UBERON:0002791!3.16e-09!29;UBERON:0003528!3.16e-09!29;UBERON:0001893!3.16e-09!29;UBERON:0004111!1.37e-08!122;UBERON:0003056!9.13e-08!49;UBERON:0002619!1.24e-07!17;UBERON:0000033!1.84e-07!63;UBERON:0002346!6.14e-07!71;UBERON:0003075!6.14e-07!71;UBERON:0007284!6.14e-07!71;UBERON:0000955!7.30e-07!50;UBERON:0006238!7.30e-07!50;UBERON:0003080!9.60e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.55e-24,21;UBERON:0001869,2.55e-24,21;UBERON:0000203,2.55e-24,21;UBERON:0003528,5.15e-17,29;UBERON:0002791,5.15e-17,29;UBERON:0001893,5.15e-17,29;UBERON:0002619,9.13e-17,17;UBERON:0010314,1.40e-14,92;UBERON:0002020,3.42e-14,34;UBERON:0007100,3.87e-12,18;UBERON:0000948,3.87e-12,18;UBERON:0005498,3.87e-12,18;UBERON:0004140,3.87e-12,18;UBERON:0009881,3.87e-12,18;UBERON:0004141,3.87e-12,18;UBERON:0003084,3.87e-12,18;UBERON:0007005,3.87e-12,18;UBERON:0004139,3.87e-12,18;UBERON:0004291,3.87e-12,18;UBERON:0002780,4.31e-12,39;UBERON:0001890,4.31e-12,39;UBERON:0006240,4.31e-12,39;UBERON:0003080,9.80e-12,40;UBERON:0000955,1.67e-11,47;UBERON:0006238,1.67e-11,47;UBERON:0003056,8.53e-11,49;UBERON:0002616,6.42e-10,46;UBERON:0000025,7.70e-10,114;UBERON:0002021,2.86e-09,10;UBERON:0000411,2.86e-09,10;UBERON:0001950,2.86e-09,10;UBERON:0004535,2.94e-09,23;UBERON:0001009,2.94e-09,23;UBERON:0001954,5.25e-09,7;UBERON:0003022,5.25e-09,7;UBERON:0002421,5.25e-09,7;UBERON:0000349,5.25e-09,7;UBERON:0002600,5.25e-09,7;UBERON:0004111,5.93e-09,122;UBERON:0001049,1.60e-08,52;UBERON:0005068,1.60e-08,52;UBERON:0006241,1.60e-08,52;UBERON:0007135,1.60e-08,52;UBERON:0000073,3.98e-08,54;UBERON:0002346,1.05e-07,64;UBERON:0003075,1.05e-07,64;UBERON:0007284,1.05e-07,64;UBERON:0010371,1.34e-07,73;UBERON:0000483,9.40e-07,174
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,1.65903379693564,3.24014251996058,2.52389953621658,0.285650984403804,0.441737081903227,2.32732518508413,1.53352753629178,0.919218786610021,0,0.127687338085188,0.307213066512487,0.923204014111357,0.640413505216868,0.52091337055676,0,0,0,0,0.427115042397309,0.372798891650601,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.502617408451458,0.521472960576829,0.511430914660661,0.83115217823824,0,0.101839363850316,0.124406970610093,0,0,0,0.459804208866946,0.540186389416048,0,0.408218994907967,1.0249097622788,0.937017245597288,0.517406741478031,0.646703978798527,0,0.351902248327898,0,0,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0.540186184383045,0.710234206755631,0.787056926989615,0.925602677324269,1.39520366850245,2.68273401399619,1.5179494507732,1.6455984991348,0.492502392237286,2.35099547682982,1.46199987425332,1.09775057645525,1.61047702512446,1.68231958851302,1.9551876352064,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0.505157755894224,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0.780534591431195,0.788175720530955,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0,0.757412781613119,0.94652465824877,0,0.861693590931196,0.238968797952552,0.222798674082394,0,0,0,0,1.92792789853084,0.283880170416537,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0,0,0,0,0,0,0,1.13025098687134,0.301564624640779,0.477489376012546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,2.82375921308533,0.920650473014354,0.572895513439397,1.71853182343688,2.05524755931193,0,1.35004500046361,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,0.760437899670719,1.50901073108861,0.468207537349412,0.512201219238954,0.631790158511746,0.476293691283074,0.463537303779422,0.77163688185482,0,0.883193520806384,0,0.177475806159338,0,0.726732083161643,0.470546902076653,0.592302255241736,0.548783918618318,0.789209134313529,0.407412341537585,0,0.474540072496697,0.492522411877817,0.818462086339379,0.619747364743864,0.192906610981141,0.749431733813838,0.233931608445408,0.859484216193193,0.956441660344217,0.441182838239031,0
|short_description=p12@Arhgef7
}}

Revision as of 14:50, 14 September 2013

Short description:p12@Arhgef7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_12_at_Arhgef7_5end
Coexpression cluster:NA
Association with transcript: -273bp_to_ENSMUST00000033908, ENSMUST00000110909, NM_001113517, uc009kvu.2, uc009kvv.2_5end
EntrezGene:Arhgef7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p12@Arhgef7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex2.49e-166

Uber anatomy
Ontology termp-valuen
cerebral cortex2.55e-2421
cerebral hemisphere2.55e-2421
pallium2.55e-2421
brain grey matter5.15e-1729
regional part of telencephalon5.15e-1729
telencephalon5.15e-1729
regional part of cerebral cortex9.13e-1717
structure with developmental contribution from neural crest1.40e-1492
gray matter3.42e-1434
primary circulatory organ3.87e-1218
heart3.87e-1218
primitive heart tube3.87e-1218
primary heart field3.87e-1218
anterior lateral plate mesoderm3.87e-1218
heart tube3.87e-1218
heart primordium3.87e-1218
cardiac mesoderm3.87e-1218
cardiogenic plate3.87e-1218
heart rudiment3.87e-1218
regional part of forebrain4.31e-1239
forebrain4.31e-1239
future forebrain4.31e-1239
anterior neural tube9.80e-1240
brain1.67e-1147
future brain1.67e-1147
pre-chordal neural plate8.53e-1149
regional part of brain6.42e-1046
tube7.70e-10114
occipital lobe2.86e-0910
visual cortex2.86e-0910
neocortex2.86e-0910
cardiovascular system2.94e-0923
circulatory system2.94e-0923
Ammon's horn5.25e-097
lobe parts of cerebral cortex5.25e-097
hippocampal formation5.25e-097
limbic system5.25e-097
limbic lobe5.25e-097
anatomical conduit5.93e-09122
neural tube1.60e-0852
neural rod1.60e-0852
future spinal cord1.60e-0852
neural keel1.60e-0852
regional part of nervous system3.98e-0854
neurectoderm1.05e-0764
neural plate1.05e-0764
presumptive neural plate1.05e-0764
ecto-epithelium1.34e-0773
epithelium9.40e-07174







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:11727817..11727831,%2B&oldid=3052545"