FFCP PHASE1:Mm9::chr9:50536222..50536234,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330938|HGNC=|MCL_coexpression_id=30|UniProt=Q80Y83|association_with_transcript=-50bp_to_ENSMUST00000117646_5end|description=CAGE_peak_9_at_Dixdc1_5end|id=chr9:50536222..50536234,-|ontology_enrichment_celltype=CL:0000117!2.53e-13!23;CL:0000337!2.53e-13!23;CL:0000540!2.09e-08!33;CL:0000047!2.09e-08!33;CL:0000031!2.09e-08!33;CL:0000404!2.09e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.67e-26,23;CL:0000337,6.67e-26,23;CL:0000540,1.72e-17,33;CL:0000047,1.72e-17,33;CL:0000031,1.72e-17,33;CL:0000404,1.72e-17,33;CL:0002612,1.30e-14,3;CL:0000393,1.65e-14,39;CL:0000211,1.65e-14,39;CL:0002613,1.11e-13,3;CL:0002319,5.57e-13,43;CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44;CL:0002321,3.18e-07,70;CL:0000120,5.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.48e-15!102;UBERON:0000924!6.48e-15!102;UBERON:0006601!6.48e-15!102;UBERON:0002346!9.69e-14!71;UBERON:0003075!9.69e-14!71;UBERON:0007284!9.69e-14!71;UBERON:0000033!2.74e-13!63;UBERON:0001049!2.23e-11!52;UBERON:0005068!2.23e-11!52;UBERON:0006241!2.23e-11!52;UBERON:0007135!2.23e-11!52;UBERON:0002020!6.18e-11!34;UBERON:0001017!9.11e-11!73;UBERON:0005743!9.11e-11!73;UBERON:0000073!5.08e-10!75;UBERON:0001016!5.08e-10!75;UBERON:0000955!7.39e-10!50;UBERON:0006238!7.39e-10!50;UBERON:0002616!2.72e-09!49;UBERON:0003056!5.47e-09!49;UBERON:0002791!1.11e-07!29;UBERON:0003528!1.11e-07!29;UBERON:0001893!1.11e-07!29;UBERON:0007811!2.81e-07!86;UBERON:0000153!4.31e-07!94;UBERON:0002420!8.79e-07!8;UBERON:0007245!8.79e-07!8;UBERON:0010009!8.79e-07!8;UBERON:0010011!8.79e-07!8;UBERON:0000454!8.79e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.00e-22,5;UBERON:0002435,5.00e-22,5;UBERON:0000204,5.00e-22,5;UBERON:0010082,5.00e-22,5;UBERON:0000073,1.77e-21,54;UBERON:0001049,9.86e-20,52;UBERON:0005068,9.86e-20,52;UBERON:0006241,9.86e-20,52;UBERON:0007135,9.86e-20,52;UBERON:0001017,1.39e-19,73;UBERON:0002420,2.14e-19,8;UBERON:0007245,2.14e-19,8;UBERON:0010009,2.14e-19,8;UBERON:0010011,2.14e-19,8;UBERON:0000454,2.14e-19,8;UBERON:0001016,5.48e-19,75;UBERON:0002346,1.12e-17,64;UBERON:0003075,1.12e-17,64;UBERON:0007284,1.12e-17,64;UBERON:0002020,6.17e-17,34;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0010371,3.58e-15,73;UBERON:0002257,1.30e-14,3;UBERON:0002616,2.27e-14,46;UBERON:0000955,5.09e-14,47;UBERON:0006238,5.09e-14,47;UBERON:0003076,1.10e-13,12;UBERON:0003057,1.10e-13,12;UBERON:0010314,1.76e-11,92;UBERON:0003528,5.48e-11,29;UBERON:0002791,5.48e-11,29;UBERON:0001893,5.48e-11,29;UBERON:0003080,1.59e-09,40;UBERON:0003056,4.25e-09,49;UBERON:0001948,5.77e-09,5;UBERON:0002315,5.77e-09,5;UBERON:0002780,7.55e-08,39;UBERON:0001890,7.55e-08,39;UBERON:0006240,7.55e-08,39;UBERON:0004733,1.18e-07,6;UBERON:0004732,1.18e-07,6;UBERON:0002028,1.18e-07,6;UBERON:0007277,1.18e-07,6;UBERON:0000025,1.41e-07,114;UBERON:0002240,1.52e-07,6;UBERON:0005174,1.52e-07,6;UBERON:0001137,1.52e-07,6;UBERON:0004111,6.68e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0,0,1.21389876515759,0,1.26766280701236,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.630974884054146,0.856952953211411,0.662605622854841,1.10241719293459,0.479227355091182,0,1.10115880999389,0.638436690425939,0.307213066512487,1.05509030184155,2.47016637726506,1.04182674111352,0.279182999001381,1.12552522006336,0.45839474333043,1.17851434189467,1.56608848879013,2.05039390407831,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,8.19786231632332,9.84399522023239,0,0,0,0,1.3481157546434,1.37250180845588,1.13088916901578,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.30140963567143,0.612328492361951,1.0249097622788,0.468508622798644,0.258703370739016,0,0,0.879755620819744,0.43839146485515,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.321101179975584,1.17211686592203,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0.704015124191131,0,0,0.49465875882444,0.645857706783622,0.180938774784468,0.238744688006273,0,0,0.556275906031529,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.406638934253697,0,0,0.218362563746178,0,0.41326727862668,0,0,0.621339313086926,0,0,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.36630324853453,0,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0,0.838452650511929,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.448176066834085,0.516919220600519,0.476293691283074,0.347652977834566,0,0,0.441596760403192,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p9@Dixdc1}} | ||
|EntrezGene=330938 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=Q80Y83 | |||
|association_with_transcript=-50bp_to_ENSMUST00000117646_5end | |||
|description=CAGE_peak_9_at_Dixdc1_5end | |||
|id=chr9:50536222..50536234,- | |||
|ontology_enrichment_celltype=CL:0000117!2.53e-13!23;CL:0000337!2.53e-13!23;CL:0000540!2.09e-08!33;CL:0000047!2.09e-08!33;CL:0000031!2.09e-08!33;CL:0000404!2.09e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.67e-26,23;CL:0000337,6.67e-26,23;CL:0000540,1.72e-17,33;CL:0000047,1.72e-17,33;CL:0000031,1.72e-17,33;CL:0000404,1.72e-17,33;CL:0002612,1.30e-14,3;CL:0000393,1.65e-14,39;CL:0000211,1.65e-14,39;CL:0002613,1.11e-13,3;CL:0002319,5.57e-13,43;CL:0000221,1.22e-12,44;CL:0000133,1.22e-12,44;CL:0002321,3.18e-07,70;CL:0000120,5.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.48e-15!102;UBERON:0000924!6.48e-15!102;UBERON:0006601!6.48e-15!102;UBERON:0002346!9.69e-14!71;UBERON:0003075!9.69e-14!71;UBERON:0007284!9.69e-14!71;UBERON:0000033!2.74e-13!63;UBERON:0001049!2.23e-11!52;UBERON:0005068!2.23e-11!52;UBERON:0006241!2.23e-11!52;UBERON:0007135!2.23e-11!52;UBERON:0002020!6.18e-11!34;UBERON:0001017!9.11e-11!73;UBERON:0005743!9.11e-11!73;UBERON:0000073!5.08e-10!75;UBERON:0001016!5.08e-10!75;UBERON:0000955!7.39e-10!50;UBERON:0006238!7.39e-10!50;UBERON:0002616!2.72e-09!49;UBERON:0003056!5.47e-09!49;UBERON:0002791!1.11e-07!29;UBERON:0003528!1.11e-07!29;UBERON:0001893!1.11e-07!29;UBERON:0007811!2.81e-07!86;UBERON:0000153!4.31e-07!94;UBERON:0002420!8.79e-07!8;UBERON:0007245!8.79e-07!8;UBERON:0010009!8.79e-07!8;UBERON:0010011!8.79e-07!8;UBERON:0000454!8.79e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.00e-22,5;UBERON:0002435,5.00e-22,5;UBERON:0000204,5.00e-22,5;UBERON:0010082,5.00e-22,5;UBERON:0000073,1.77e-21,54;UBERON:0001049,9.86e-20,52;UBERON:0005068,9.86e-20,52;UBERON:0006241,9.86e-20,52;UBERON:0007135,9.86e-20,52;UBERON:0001017,1.39e-19,73;UBERON:0002420,2.14e-19,8;UBERON:0007245,2.14e-19,8;UBERON:0010009,2.14e-19,8;UBERON:0010011,2.14e-19,8;UBERON:0000454,2.14e-19,8;UBERON:0001016,5.48e-19,75;UBERON:0002346,1.12e-17,64;UBERON:0003075,1.12e-17,64;UBERON:0007284,1.12e-17,64;UBERON:0002020,6.17e-17,34;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0010371,3.58e-15,73;UBERON:0002257,1.30e-14,3;UBERON:0002616,2.27e-14,46;UBERON:0000955,5.09e-14,47;UBERON:0006238,5.09e-14,47;UBERON:0003076,1.10e-13,12;UBERON:0003057,1.10e-13,12;UBERON:0010314,1.76e-11,92;UBERON:0003528,5.48e-11,29;UBERON:0002791,5.48e-11,29;UBERON:0001893,5.48e-11,29;UBERON:0003080,1.59e-09,40;UBERON:0003056,4.25e-09,49;UBERON:0001948,5.77e-09,5;UBERON:0002315,5.77e-09,5;UBERON:0002780,7.55e-08,39;UBERON:0001890,7.55e-08,39;UBERON:0006240,7.55e-08,39;UBERON:0004733,1.18e-07,6;UBERON:0004732,1.18e-07,6;UBERON:0002028,1.18e-07,6;UBERON:0007277,1.18e-07,6;UBERON:0000025,1.41e-07,114;UBERON:0002240,1.52e-07,6;UBERON:0005174,1.52e-07,6;UBERON:0001137,1.52e-07,6;UBERON:0004111,6.68e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0,0,1.21389876515759,0,1.26766280701236,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.630974884054146,0.856952953211411,0.662605622854841,1.10241719293459,0.479227355091182,0,1.10115880999389,0.638436690425939,0.307213066512487,1.05509030184155,2.47016637726506,1.04182674111352,0.279182999001381,1.12552522006336,0.45839474333043,1.17851434189467,1.56608848879013,2.05039390407831,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,8.19786231632332,9.84399522023239,0,0,0,0,1.3481157546434,1.37250180845588,1.13088916901578,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.30140963567143,0.612328492361951,1.0249097622788,0.468508622798644,0.258703370739016,0,0,0.879755620819744,0.43839146485515,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.321101179975584,1.17211686592203,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0.704015124191131,0,0,0.49465875882444,0.645857706783622,0.180938774784468,0.238744688006273,0,0,0.556275906031529,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.406638934253697,0,0,0.218362563746178,0,0.41326727862668,0,0,0.621339313086926,0,0,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.36630324853453,0,0,1.12950368523413,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0,0.838452650511929,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.448176066834085,0.516919220600519,0.476293691283074,0.347652977834566,0,0,0.441596760403192,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.548783918618318,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p9@Dixdc1 | |||
}} |
Revision as of 18:10, 14 September 2013
Short description: | p9@Dixdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Dixdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -50bp_to_ENSMUST00000117646_5end |
EntrezGene: | Dixdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.67e-26 | 23 |
neuroblast (sensu Vertebrata) | 6.67e-26 | 23 |
neuron | 1.72e-17 | 33 |
neuronal stem cell | 1.72e-17 | 33 |
neuroblast | 1.72e-17 | 33 |
electrically signaling cell | 1.72e-17 | 33 |
neuron of the ventral spinal cord | 1.30e-14 | 3 |
electrically responsive cell | 1.65e-14 | 39 |
electrically active cell | 1.65e-14 | 39 |
striatum neuron | 1.11e-13 | 3 |
neural cell | 5.57e-13 | 43 |
ectodermal cell | 1.22e-12 | 44 |
neurectodermal cell | 1.22e-12 | 44 |
embryonic cell | 3.18e-07 | 70 |
granule cell | 5.23e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.