FFCP PHASE1:Mm9::chr9:95650714..95650752,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22063|HGNC=|MCL_coexpression_id=1|UniProt=B2RPS7,B7ZMP6,Q61056|association_with_transcript=24bp_to_ENSMUST00000053785,ENSMUST00000113006,NM_011643,uc009rbh.1,uc009rbi.1,uc009rbj.1,uc012gyl.1_5end|description=CAGE_peak_1_at_Trpc1_5end|id=chr9:95650714..95650752,-|ontology_enrichment_celltype=CL:0000221!7.48e-07!44;CL:0000133!7.48e-07!44|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.66e-19!75;UBERON:0001016!2.66e-19!75;UBERON:0001017!1.59e-18!73;UBERON:0005743!1.59e-18!73;UBERON:0000033!3.55e-17!63;UBERON:0000955!3.07e-16!50;UBERON:0006238!3.07e-16!50;UBERON:0001049!5.98e-16!52;UBERON:0005068!5.98e-16!52;UBERON:0006241!5.98e-16!52;UBERON:0007135!5.98e-16!52;UBERON:0002616!1.23e-15!49;UBERON:0004121!1.62e-15!102;UBERON:0000924!1.62e-15!102;UBERON:0006601!1.62e-15!102;UBERON:0000025!2.34e-14!114;UBERON:0002346!2.35e-14!71;UBERON:0003075!2.35e-14!71;UBERON:0007284!2.35e-14!71;UBERON:0004111!1.07e-13!122;UBERON:0003056!2.21e-13!49;UBERON:0003080!4.32e-12!40;UBERON:0002020!4.37e-12!34;UBERON:0002780!1.49e-11!39;UBERON:0001890!1.49e-11!39;UBERON:0006240!1.49e-11!39;UBERON:0002791!8.65e-11!29;UBERON:0003528!8.65e-11!29;UBERON:0001893!8.65e-11!29;UBERON:0000956!4.09e-08!21;UBERON:0001869!4.09e-08!21;UBERON:0000203!4.09e-08!21;UBERON:0007811!4.54e-08!86;UBERON:0002021!6.33e-08!10;UBERON:0000411!6.33e-08!10;UBERON:0001950!6.33e-08!10;UBERON:0002619!1.82e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-19,75;UBERON:0001017,2.22e-18,73;UBERON:0000073,1.94e-17,54;UBERON:0002346,2.05e-16,64;UBERON:0003075,2.05e-16,64;UBERON:0007284,2.05e-16,64;UBERON:0001049,3.16e-16,52;UBERON:0005068,3.16e-16,52;UBERON:0006241,3.16e-16,52;UBERON:0007135,3.16e-16,52;UBERON:0004121,3.95e-16,95;UBERON:0000924,3.95e-16,95;UBERON:0006601,3.95e-16,95;UBERON:0010314,1.26e-15,92;UBERON:0000955,8.45e-15,47;UBERON:0006238,8.45e-15,47;UBERON:0002616,3.53e-14,46;UBERON:0010371,3.89e-14,73;UBERON:0000025,1.04e-13,114;UBERON:0004111,4.03e-13,122;UBERON:0003056,5.67e-13,49;UBERON:0002020,3.40e-12,34;UBERON:0003080,4.20e-12,40;UBERON:0002780,1.55e-11,39;UBERON:0001890,1.55e-11,39;UBERON:0006240,1.55e-11,39;UBERON:0003528,8.57e-11,29;UBERON:0002791,8.57e-11,29;UBERON:0001893,8.57e-11,29;UBERON:0002021,2.02e-08,10;UBERON:0000411,2.02e-08,10;UBERON:0001950,2.02e-08,10;UBERON:0000956,6.29e-08,21;UBERON:0001869,6.29e-08,21;UBERON:0000203,6.29e-08,21;UBERON:0002619,3.39e-07,17|phase1_expression=5.12476310735341,0,1.36499771816861,0,1.00179145989269,1.6787927191189,1.16806320297763,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0,4.93251082876205,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.304130793658544,0,1.56478268869608,1.52617609466313,1.75748946187577,2.91644848611425,0.55994568650145,1.43752564364972,0,0,0.336093799142464,1.28629718017973,2.0057340795713,4.12537673821954,2.22548106945558,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,1.15265491596466,2.17748185847803,1.4850653216486,2.3135745748652,1.99955689082663,4.41737081903227,0.979926393719632,0.766763768145891,1.83843757322004,11.0115880999389,8.68273898979276,4.76180253094355,1.97829431595291,2.19570344645783,2.08365348222704,6.97957497503452,3.93933827022176,6.72312290217964,3.53554302568401,4.6982654663704,1.86399445825301,2.95332153999418,2.94729084416464,2.02905142091174,0.860423876981386,2.03991400112325,0,0,0,2.24711072210803,1.87473354835864,1.03914401841148,1.7666978725517,7.32385782838739,5.13305909657271,0,0,0.216491041011214,0.253359865475099,1.01104889002957,2.51204535381932,0.258937883647172,1.1875371125186,1.21439728736295,0,0.461230994512117,1.05505848386836,1.41106448562846,0.753999547978053,0.988779870937496,2.31358971071859,0.884610551949874,1.13236794963186,0.441683036920787,0.969750506270444,1.86391761218122,8.78342391034641,9.63454851341893,1.27728527604296,0.239630249011841,0,0.127070227073065,9.43681028250383,17.3850229071078,4.14659361972453,13.210648334613,18.1557974704535,10.389402227978,14.1149898868949,1.42575109390443,0.746441823660558,0.505445516867349,8.20723237957248,0.910843100738926,0.689706313300419,1.80062129805349,1.80845781402858,2.9255694635071,3.58718416797579,2.62364828767241,12.4177617954728,0.431135985865684,0.567318240503458,0.351902248327898,0.657587197282725,0.556094498451196,1.39300866608867,1.4404749548556,0,0,0.257347907114715,0,1.24275463521301,0.469052119962192,1.62055855314913,1.42046841351126,1.96764231747404,1.69693824176116,1.62773761325285,1.60964040839772,1.75148013550754,2.46839774870221,1.97000956894914,2.67527071501324,2.48539978623065,2.41505126820156,1.74468344388483,10.9350773253346,2.98423375899925,0,0.528901133327089,0.853153002140936,5.80591679651096,1.28867461322093,2.42020229548011,0.889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| ||
|EntrezGene=22063 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=B2RPS7,B7ZMP6,Q61056 | |||
|association_with_transcript=24bp_to_ENSMUST00000053785,ENSMUST00000113006,NM_011643,uc009rbh.1,uc009rbi.1,uc009rbj.1,uc012gyl.1_5end | |||
|description=CAGE_peak_1_at_Trpc1_5end | |||
|id=chr9:95650714..95650752,- | |||
|ontology_enrichment_celltype=CL:0000221!7.48e-07!44;CL:0000133!7.48e-07!44 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.66e-19!75;UBERON:0001016!2.66e-19!75;UBERON:0001017!1.59e-18!73;UBERON:0005743!1.59e-18!73;UBERON:0000033!3.55e-17!63;UBERON:0000955!3.07e-16!50;UBERON:0006238!3.07e-16!50;UBERON:0001049!5.98e-16!52;UBERON:0005068!5.98e-16!52;UBERON:0006241!5.98e-16!52;UBERON:0007135!5.98e-16!52;UBERON:0002616!1.23e-15!49;UBERON:0004121!1.62e-15!102;UBERON:0000924!1.62e-15!102;UBERON:0006601!1.62e-15!102;UBERON:0000025!2.34e-14!114;UBERON:0002346!2.35e-14!71;UBERON:0003075!2.35e-14!71;UBERON:0007284!2.35e-14!71;UBERON:0004111!1.07e-13!122;UBERON:0003056!2.21e-13!49;UBERON:0003080!4.32e-12!40;UBERON:0002020!4.37e-12!34;UBERON:0002780!1.49e-11!39;UBERON:0001890!1.49e-11!39;UBERON:0006240!1.49e-11!39;UBERON:0002791!8.65e-11!29;UBERON:0003528!8.65e-11!29;UBERON:0001893!8.65e-11!29;UBERON:0000956!4.09e-08!21;UBERON:0001869!4.09e-08!21;UBERON:0000203!4.09e-08!21;UBERON:0007811!4.54e-08!86;UBERON:0002021!6.33e-08!10;UBERON:0000411!6.33e-08!10;UBERON:0001950!6.33e-08!10;UBERON:0002619!1.82e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-19,75;UBERON:0001017,2.22e-18,73;UBERON:0000073,1.94e-17,54;UBERON:0002346,2.05e-16,64;UBERON:0003075,2.05e-16,64;UBERON:0007284,2.05e-16,64;UBERON:0001049,3.16e-16,52;UBERON:0005068,3.16e-16,52;UBERON:0006241,3.16e-16,52;UBERON:0007135,3.16e-16,52;UBERON:0004121,3.95e-16,95;UBERON:0000924,3.95e-16,95;UBERON:0006601,3.95e-16,95;UBERON:0010314,1.26e-15,92;UBERON:0000955,8.45e-15,47;UBERON:0006238,8.45e-15,47;UBERON:0002616,3.53e-14,46;UBERON:0010371,3.89e-14,73;UBERON:0000025,1.04e-13,114;UBERON:0004111,4.03e-13,122;UBERON:0003056,5.67e-13,49;UBERON:0002020,3.40e-12,34;UBERON:0003080,4.20e-12,40;UBERON:0002780,1.55e-11,39;UBERON:0001890,1.55e-11,39;UBERON:0006240,1.55e-11,39;UBERON:0003528,8.57e-11,29;UBERON:0002791,8.57e-11,29;UBERON:0001893,8.57e-11,29;UBERON:0002021,2.02e-08,10;UBERON:0000411,2.02e-08,10;UBERON:0001950,2.02e-08,10;UBERON:0000956,6.29e-08,21;UBERON:0001869,6.29e-08,21;UBERON:0000203,6.29e-08,21;UBERON:0002619,3.39e-07,17 | |||
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| |||
|short_description=p1@Trpc1 | |||
}} |
Revision as of 19:01, 14 September 2013
Short description: | p1@Trpc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trpc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 24bp_to_ENSMUST00000053785, ENSMUST00000113006, NM_011643, uc009rbh.1, uc009rbi.1, uc009rbj.1, uc012gyl.1_5end |
EntrezGene: | Trpc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.