FFCP PHASE1:Mm9::chrX:162784541..162784544,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=593|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:162784541..162784544,+|id=chrX:162784541..162784544,+|ontology_enrichment_celltype=CL:0000393!9.25e-20!39;CL:0000211!9.25e-20!39;CL:0000540!1.95e-19!33;CL:0000047!1.95e-19!33;CL:0000031!1.95e-19!33;CL:0000404!1.95e-19!33;CL:0000221!3.89e-19!44;CL:0000133!3.89e-19!44;CL:0002319!2.02e-18!43;CL:0000055!2.45e-18!50;CL:0000117!5.39e-12!23;CL:0000337!5.39e-12!23;CL:0002321!8.20e-09!70;CL:0000220!8.20e-09!70;CL:0000107!1.32e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.38e-32,33;CL:0000047,1.38e-32,33;CL:0000031,1.38e-32,33;CL:0000404,1.38e-32,33;CL:0000221,9.65e-30,44;CL:0000133,9.65e-30,44;CL:0002319,4.39e-28,43;CL:0000393,1.28e-26,39;CL:0000211,1.28e-26,39;CL:0000107,1.63e-20,9;CL:0000117,1.43e-16,23;CL:0000337,1.43e-16,23;CL:0002321,3.58e-16,70;CL:0002609,1.64e-08,6;CL:0000723,5.35e-08,91;CL:0000048,5.35e-08,91;CL:0000034,3.72e-07,97;CL:0002612,5.86e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.27e-29!75;UBERON:0001016!4.27e-29!75;UBERON:0001017!1.29e-27!73;UBERON:0005743!1.29e-27!73;UBERON:0004121!4.80e-24!102;UBERON:0000924!4.80e-24!102;UBERON:0006601!4.80e-24!102;UBERON:0000033!2.20e-18!63;UBERON:0002020!2.56e-17!34;UBERON:0000955!8.07e-17!50;UBERON:0006238!8.07e-17!50;UBERON:0001049!1.82e-16!52;UBERON:0005068!1.82e-16!52;UBERON:0006241!1.82e-16!52;UBERON:0007135!1.82e-16!52;UBERON:0002616!2.40e-16!49;UBERON:0002346!3.64e-16!71;UBERON:0003075!3.64e-16!71;UBERON:0007284!3.64e-16!71;UBERON:0002791!3.88e-16!29;UBERON:0003528!3.88e-16!29;UBERON:0001893!3.88e-16!29;UBERON:0003056!1.10e-14!49;UBERON:0003080!9.16e-14!40;UBERON:0002780!2.68e-13!39;UBERON:0001890!2.68e-13!39;UBERON:0006240!2.68e-13!39;UBERON:0000956!9.08e-12!21;UBERON:0001869!9.08e-12!21;UBERON:0000203!9.08e-12!21;UBERON:0000010!7.55e-10!11;UBERON:0002619!2.70e-09!17;UBERON:0007811!2.82e-09!86;UBERON:0002410!1.32e-08!9;UBERON:0000153!8.69e-08!94;UBERON:0002021!1.30e-07!10;UBERON:0000411!1.30e-07!10;UBERON:0001950!1.30e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.24e-31,75;UBERON:0004121,6.68e-30,95;UBERON:0000924,6.68e-30,95;UBERON:0006601,6.68e-30,95;UBERON:0001017,9.49e-29,73;UBERON:0002020,2.12e-24,34;UBERON:0000010,7.25e-24,11;UBERON:0003528,2.61e-21,29;UBERON:0002791,2.61e-21,29;UBERON:0001893,2.61e-21,29;UBERON:0002346,6.24e-21,64;UBERON:0003075,6.24e-21,64;UBERON:0007284,6.24e-21,64;UBERON:0002410,1.63e-20,9;UBERON:0010371,4.84e-19,73;UBERON:0000073,7.49e-18,54;UBERON:0000956,3.26e-16,21;UBERON:0001869,3.26e-16,21;UBERON:0000203,3.26e-16,21;UBERON:0001049,1.29e-15,52;UBERON:0005068,1.29e-15,52;UBERON:0006241,1.29e-15,52;UBERON:0007135,1.29e-15,52;UBERON:0003056,4.73e-15,49;UBERON:0002780,1.23e-14,39;UBERON:0001890,1.23e-14,39;UBERON:0006240,1.23e-14,39;UBERON:0003080,3.72e-14,40;UBERON:0010314,1.29e-13,92;UBERON:0002616,3.35e-13,46;UBERON:0000955,8.11e-13,47;UBERON:0006238,8.11e-13,47;UBERON:0002619,2.65e-12,17;UBERON:0002021,5.02e-12,10;UBERON:0000411,5.02e-12,10;UBERON:0001950,5.02e-12,10;UBERON:0000013,5.47e-08,3;UBERON:0010313,6.38e-08,3;UBERON:0002342,6.38e-08,3;UBERON:0002005,6.38e-08,3;UBERON:0005428,6.38e-08,3;UBERON:0005062,6.38e-08,3;UBERON:0000011,8.67e-08,3;UBERON:0011216,9.22e-08,194;UBERON:0002257,5.86e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0.202316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,3.83651565541367,1.75507719831198,1.89292465216244,0,0.220868540951614,1.71487118900936,1.24599112323707,0.919218786610021,1.10115880999389,1.14918604276669,0.921639199537461,1.05509030184155,0.640413505216868,1.04182674111352,0.279182999001381,2.8138130501584,1.98637722109853,2.35702868378934,1.70846016958924,2.42319279572891,1.06016670666458,2.56943304363071,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0.969750506270444,0,1.75668478206928,0.628340120440365,0,0,0,0,0.748953197024114,3.66000482254901,0.502617408451458,0.521472960576829,1.27857728665165,0.83115217823824,0.324482526135515,0.203678727700633,0.373220911830279,0,0,0,0.229902104433473,0,0.753524089178575,1.29269348387523,3.07472928683639,0.937017245597288,1.03481348295606,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,1.89260953707715,0.92614151141356,0,0,0.426576501070468,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0.252470927204373,4.10160685241134,3.12350995437311,3.44677436372478,2.38968797952552,5.12436950389506,3.39691836946599,4.85772842009873,4.38383786866968,2.76701444562566,0.642642632843614,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0,0,0.484393280087717,0.0603129249281559,0,0.164140899745061,0,0.370850604021019,0.341741761595705,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.844780627453891,0.469428954583016,0.13020438484395,0.104859344425711,0.966336483304024,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.214368379079066,0,2.25900737046827,0.920650473014354,1.71868654031819,3.26521046453006,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,2.5888015587591,0.103787347584177,0,1.02440163452481,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.715308569841963,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p@chrX:162784541..162784544,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=593 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:162784541..162784544,+ | |||
|id=chrX:162784541..162784544,+ | |||
|ontology_enrichment_celltype=CL:0000393!9.25e-20!39;CL:0000211!9.25e-20!39;CL:0000540!1.95e-19!33;CL:0000047!1.95e-19!33;CL:0000031!1.95e-19!33;CL:0000404!1.95e-19!33;CL:0000221!3.89e-19!44;CL:0000133!3.89e-19!44;CL:0002319!2.02e-18!43;CL:0000055!2.45e-18!50;CL:0000117!5.39e-12!23;CL:0000337!5.39e-12!23;CL:0002321!8.20e-09!70;CL:0000220!8.20e-09!70;CL:0000107!1.32e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.38e-32,33;CL:0000047,1.38e-32,33;CL:0000031,1.38e-32,33;CL:0000404,1.38e-32,33;CL:0000221,9.65e-30,44;CL:0000133,9.65e-30,44;CL:0002319,4.39e-28,43;CL:0000393,1.28e-26,39;CL:0000211,1.28e-26,39;CL:0000107,1.63e-20,9;CL:0000117,1.43e-16,23;CL:0000337,1.43e-16,23;CL:0002321,3.58e-16,70;CL:0002609,1.64e-08,6;CL:0000723,5.35e-08,91;CL:0000048,5.35e-08,91;CL:0000034,3.72e-07,97;CL:0002612,5.86e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.27e-29!75;UBERON:0001016!4.27e-29!75;UBERON:0001017!1.29e-27!73;UBERON:0005743!1.29e-27!73;UBERON:0004121!4.80e-24!102;UBERON:0000924!4.80e-24!102;UBERON:0006601!4.80e-24!102;UBERON:0000033!2.20e-18!63;UBERON:0002020!2.56e-17!34;UBERON:0000955!8.07e-17!50;UBERON:0006238!8.07e-17!50;UBERON:0001049!1.82e-16!52;UBERON:0005068!1.82e-16!52;UBERON:0006241!1.82e-16!52;UBERON:0007135!1.82e-16!52;UBERON:0002616!2.40e-16!49;UBERON:0002346!3.64e-16!71;UBERON:0003075!3.64e-16!71;UBERON:0007284!3.64e-16!71;UBERON:0002791!3.88e-16!29;UBERON:0003528!3.88e-16!29;UBERON:0001893!3.88e-16!29;UBERON:0003056!1.10e-14!49;UBERON:0003080!9.16e-14!40;UBERON:0002780!2.68e-13!39;UBERON:0001890!2.68e-13!39;UBERON:0006240!2.68e-13!39;UBERON:0000956!9.08e-12!21;UBERON:0001869!9.08e-12!21;UBERON:0000203!9.08e-12!21;UBERON:0000010!7.55e-10!11;UBERON:0002619!2.70e-09!17;UBERON:0007811!2.82e-09!86;UBERON:0002410!1.32e-08!9;UBERON:0000153!8.69e-08!94;UBERON:0002021!1.30e-07!10;UBERON:0000411!1.30e-07!10;UBERON:0001950!1.30e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.24e-31,75;UBERON:0004121,6.68e-30,95;UBERON:0000924,6.68e-30,95;UBERON:0006601,6.68e-30,95;UBERON:0001017,9.49e-29,73;UBERON:0002020,2.12e-24,34;UBERON:0000010,7.25e-24,11;UBERON:0003528,2.61e-21,29;UBERON:0002791,2.61e-21,29;UBERON:0001893,2.61e-21,29;UBERON:0002346,6.24e-21,64;UBERON:0003075,6.24e-21,64;UBERON:0007284,6.24e-21,64;UBERON:0002410,1.63e-20,9;UBERON:0010371,4.84e-19,73;UBERON:0000073,7.49e-18,54;UBERON:0000956,3.26e-16,21;UBERON:0001869,3.26e-16,21;UBERON:0000203,3.26e-16,21;UBERON:0001049,1.29e-15,52;UBERON:0005068,1.29e-15,52;UBERON:0006241,1.29e-15,52;UBERON:0007135,1.29e-15,52;UBERON:0003056,4.73e-15,49;UBERON:0002780,1.23e-14,39;UBERON:0001890,1.23e-14,39;UBERON:0006240,1.23e-14,39;UBERON:0003080,3.72e-14,40;UBERON:0010314,1.29e-13,92;UBERON:0002616,3.35e-13,46;UBERON:0000955,8.11e-13,47;UBERON:0006238,8.11e-13,47;UBERON:0002619,2.65e-12,17;UBERON:0002021,5.02e-12,10;UBERON:0000411,5.02e-12,10;UBERON:0001950,5.02e-12,10;UBERON:0000013,5.47e-08,3;UBERON:0010313,6.38e-08,3;UBERON:0002342,6.38e-08,3;UBERON:0002005,6.38e-08,3;UBERON:0005428,6.38e-08,3;UBERON:0005062,6.38e-08,3;UBERON:0000011,8.67e-08,3;UBERON:0011216,9.22e-08,194;UBERON:0002257,5.86e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0.202316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,3.83651565541367,1.75507719831198,1.89292465216244,0,0.220868540951614,1.71487118900936,1.24599112323707,0.919218786610021,1.10115880999389,1.14918604276669,0.921639199537461,1.05509030184155,0.640413505216868,1.04182674111352,0.279182999001381,2.8138130501584,1.98637722109853,2.35702868378934,1.70846016958924,2.42319279572891,1.06016670666458,2.56943304363071,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0.969750506270444,0,1.75668478206928,0.628340120440365,0,0,0,0,0.748953197024114,3.66000482254901,0.502617408451458,0.521472960576829,1.27857728665165,0.83115217823824,0.324482526135515,0.203678727700633,0.373220911830279,0,0,0,0.229902104433473,0,0.753524089178575,1.29269348387523,3.07472928683639,0.937017245597288,1.03481348295606,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,1.89260953707715,0.92614151141356,0,0,0.426576501070468,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0.252470927204373,4.10160685241134,3.12350995437311,3.44677436372478,2.38968797952552,5.12436950389506,3.39691836946599,4.85772842009873,4.38383786866968,2.76701444562566,0.642642632843614,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0,0,0.484393280087717,0.0603129249281559,0,0.164140899745061,0,0.370850604021019,0.341741761595705,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.844780627453891,0.469428954583016,0.13020438484395,0.104859344425711,0.966336483304024,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.214368379079066,0,2.25900737046827,0.920650473014354,1.71868654031819,3.26521046453006,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,2.5888015587591,0.103787347584177,0,1.02440163452481,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.715308569841963,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p@chrX:162784541..162784544,+ | |||
}} |
Revision as of 19:39, 14 September 2013
Short description: | p@chrX:162784541..162784544, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:162784541..162784544, + |
Coexpression cluster: | MCL_coexpression_mm9:593 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.38e-32 | 33 |
neuronal stem cell | 1.38e-32 | 33 |
neuroblast | 1.38e-32 | 33 |
electrically signaling cell | 1.38e-32 | 33 |
ectodermal cell | 9.65e-30 | 44 |
neurectodermal cell | 9.65e-30 | 44 |
neural cell | 4.39e-28 | 43 |
electrically responsive cell | 1.28e-26 | 39 |
electrically active cell | 1.28e-26 | 39 |
autonomic neuron | 1.63e-20 | 9 |
CNS neuron (sensu Vertebrata) | 1.43e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-16 | 23 |
embryonic cell | 3.58e-16 | 70 |
neuron of cerebral cortex | 1.64e-08 | 6 |
somatic stem cell | 5.35e-08 | 91 |
multi fate stem cell | 5.35e-08 | 91 |
stem cell | 3.72e-07 | 97 |
neuron of the ventral spinal cord | 5.86e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.