FFCP PHASE1:Hg19::chr12:49932805..49932858,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23416 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6252 | |||
|TSSclassifier=strong | |||
|UniProt=Q9ULD8 | |||
|association_with_transcript=-81bp_to_ENST00000257981,NM_012284,uc001ruh.1,uc010smj.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_KCNH3_5end | |||
|id=chr12:49932805..49932858,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.27e-18!42;CL:0000860!3.57e-16!45;CL:0000766!1.90e-08!76;CL:0002194!3.94e-08!63;CL:0000576!3.94e-08!63;CL:0000040!3.94e-08!63;CL:0000559!3.94e-08!63;CL:0002009!6.09e-08!65;CL:0000738!7.23e-08!140;CL:0002087!1.57e-07!119;CL:0000557!2.81e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.54e-13;33!CL:0002057;7.54e-13;33!CL:0000576;7.36e-11;48!CL:0000473;4.80e-08;39!CL:0000234;4.80e-08;39!CL:0000791;6.71e-07;18!CL:0000789;6.71e-07;18!CL:0002419;6.71e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.48e-21,42;CL:0002057,5.48e-21,42;CL:0000473,7.45e-17,48;CL:0000234,7.45e-17,48;CL:0002194,3.03e-11,59;CL:0000576,3.03e-11,59;CL:0000040,3.03e-11,59;CL:0000559,3.03e-11,59;CL:0000766,3.07e-11,72;CL:0002009,1.52e-10,61;CL:0000557,2.45e-09,67;CL:0002087,2.98e-09,115;CL:0000839,5.32e-09,66;CL:0000738,8.58e-09,136;CL:0002393,7.90e-08,9;CL:0002397,7.90e-08,9;CL:0000791,6.59e-07,18;CL:0000789,6.59e-07,18;CL:0002420,6.59e-07,18;CL:0002419,6.59e-07,18;CL:0000790,6.59e-07,18;CL:0002031,8.41e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-14;42!CL:0000790;6.71e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.33e-23!41;UBERON:0001890!4.33e-23!41;UBERON:0006240!4.33e-23!41;UBERON:0001017!1.57e-22!82;UBERON:0000955!3.14e-22!69;UBERON:0006238!3.14e-22!69;UBERON:0003080!4.87e-22!42;UBERON:0005743!1.86e-21!86;UBERON:0001049!3.60e-21!57;UBERON:0005068!3.60e-21!57;UBERON:0006241!3.60e-21!57;UBERON:0007135!3.60e-21!57;UBERON:0000073!1.42e-20!94;UBERON:0001016!1.42e-20!94;UBERON:0001893!4.33e-20!34;UBERON:0001869!1.22e-19!32;UBERON:0007023!1.74e-19!115;UBERON:0002791!2.56e-19!33;UBERON:0002020!3.53e-19!34;UBERON:0003528!3.53e-19!34;UBERON:0002616!1.09e-18!59;UBERON:0002619!1.73e-16!22;UBERON:0001950!5.46e-15!20;UBERON:0000956!1.06e-14!25;UBERON:0000203!1.06e-14!25;UBERON:0002346!6.76e-14!90;UBERON:0003075!2.02e-13!86;UBERON:0007284!2.02e-13!86;UBERON:0003056!2.82e-13!61;UBERON:0000153!2.13e-11!129;UBERON:0007811!2.13e-11!129;UBERON:0000033!8.22e-11!123;UBERON:0000924!5.33e-09!173;UBERON:0006601!5.33e-09!173;UBERON:0004121!1.45e-08!169;UBERON:0002390!8.88e-08!102;UBERON:0003061!8.88e-08!102;UBERON:0002420!3.42e-07!9;UBERON:0007245!3.42e-07!9;UBERON:0010009!3.42e-07!9;UBERON:0010011!3.42e-07!9;UBERON:0000454!3.42e-07!9;UBERON:0001474!8.40e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.82e-25;32!UBERON:0002619;2.84e-24;22!UBERON:0001893;6.95e-24;34!UBERON:0002791;6.85e-23;32!UBERON:0001950;4.97e-22;20!UBERON:0003528;8.78e-22;34!UBERON:0002020;8.78e-22;34!UBERON:0002780;9.25e-22;41!UBERON:0001890;9.25e-22;41!UBERON:0000956;2.17e-20;25!UBERON:0000203;2.17e-20;25!UBERON:0000073;1.16e-14;53!UBERON:0002616;1.16e-14;53!UBERON:0000955;2.77e-12;68!UBERON:0001017;3.37e-11;75!UBERON:0001016;4.29e-10;83!UBERON:0002420;1.02e-08;9!UBERON:0007245;1.02e-08;9!UBERON:0010009;1.02e-08;9!UBERON:0010011;1.02e-08;9!UBERON:0000454;1.02e-08;9!UBERON:0000200;1.92e-08;6!UBERON:0000349;2.80e-07;5!UBERON:0001872;4.29e-07;5!UBERON:0001871;6.97e-07;6!UBERON:0002021;8.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.04e-29,41;UBERON:0001890,1.04e-29,41;UBERON:0003080,1.04e-29,41;UBERON:0006240,1.04e-29,41;UBERON:0001869,8.94e-28,32;UBERON:0001893,2.84e-27,34;UBERON:0002791,1.89e-25,32;UBERON:0000955,2.19e-25,68;UBERON:0006238,2.19e-25,68;UBERON:0001017,7.94e-25,81;UBERON:0003528,8.92e-25,34;UBERON:0002020,8.92e-25,34;UBERON:0000073,2.08e-24,53;UBERON:0002616,2.08e-24,53;UBERON:0002619,2.62e-24,22;UBERON:0001049,2.01e-23,56;UBERON:0005068,2.01e-23,56;UBERON:0006241,2.01e-23,56;UBERON:0007135,2.01e-23,56;UBERON:0001016,7.68e-23,89;UBERON:0001950,4.57e-22,20;UBERON:0000956,2.02e-20,25;UBERON:0000203,2.02e-20,25;UBERON:0003056,9.45e-18,61;UBERON:0007023,3.77e-15,114;UBERON:0003075,3.41e-13,82;UBERON:0007284,3.41e-13,82;UBERON:0002346,1.07e-12,86;UBERON:0001474,3.26e-09,82;UBERON:0002390,3.36e-09,98;UBERON:0003061,3.36e-09,98;UBERON:0002420,1.06e-08,9;UBERON:0007245,1.06e-08,9;UBERON:0010009,1.06e-08,9;UBERON:0010011,1.06e-08,9;UBERON:0000454,1.06e-08,9;UBERON:0000200,1.98e-08,6;UBERON:0010371,2.34e-08,104;UBERON:0004765,1.94e-07,90;UBERON:0000349,2.85e-07,5;UBERON:0002193,3.03e-07,108;UBERON:0002371,4.14e-07,76;UBERON:0001872,4.33e-07,5;UBERON:0002021,7.01e-07,5;UBERON:0001871,7.22e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0.125542639594803,0,0,0,2.36018566109342,0.767658796194425,2.16742572642506,0,0,0,0,0,0,5.53995408531877,3.81034450193269,3.03815219002193,0,0.647787332037959,0,3.05336301437086,0.755751887377619,2.18325655069035,1.16214518452842,0.822335776043652,1.23882548358041,2.8769239232215,2.81776777182011,1.6553756092201,1.37898272294647,0.645484683583826,6.77132432971709,1.50593871634084,1.63743690034707,1.12361742222542,0.306083892370903,1.92557416245656,2.55734850319616,1.9791078011203,1.99463657621632,1.70489900213078,0.870627715885752,2.8369261234557,1.86846674698672,2.00998932205395,2.60741459210101,1.73751075764093,1.81619850790011,1.47311054395026,1.26584954976354,2.32380814943136,2.55125159958052,2.30624510059213,3.81917345898083,3.90459921387916,3.85741408072992,1.99508920618874,1.79025009479181,1.0959849225878,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,2.360517241366,1.57204305099666,2.46721798799411,3.34372990781356,3.91106719960308,0,1.94826728407911,1.22551502573691,0.589211814949674,1.10766947291811,0.812411591295047,2.81800903396485,1.69077151827842,0.657751618414705,0.552700035571697,1.15921234294021,1.18629250529648,1.60524496853828,3.1360657141493,2.49280553934646,1.53288197440768,0.34362744548263,0.506039384039006,1.59282707162048,1.30216690771284,0,1.20460095262218,0.76791966692651,2.49861453104692,2.13099526839615,1.64225599384209,1.81446068902259,2.13952156626806,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,7.66227591661619,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0,0.286836620748814,0,2.24271040056923,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0.860413786167011,0,0,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.503946384596579,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.2937654491571,0.898401253958239,0,0,2.31986643833309,1.00509759200609,2.55175500661265,0,0,1.65766205374414,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,1.37257369524342,2.27444828735176,2.5885704098234,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0,0.515205058238611,3.57120912791539,3.87794649626764,0,0.650060246036521,1.6068392984416,0,0,0.15350367472613,0,0,0,0.511359764496605,0.534192213880424,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,3.55213326462519,3.0585488285695,5.12682468456746,2.85878130549347,2.46817363851717,0.648473311192717,2.16012574895246,1.58625035258854,1.1750647824022,2.88743956579008,2.94048259177238,0.185803175125719,0,0.284567373393656,0.956557636372934,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0.728163130497081,0,0,0.23874448473769,0,0,35.7893153195867,47.4055933303428,0.222617410045812,0,2.74463030566391,1.39473591775749,0.828851746593443,1.25966373927138,0.102268682502155,0.369254416383208,0,0.0898683511473268,0,0,0.0986434056369336,0,0,55.2519665274275,28.9436466264976,15.9691038400955,0.260427761085233,0.0874599999961957,0,4.66553137970549,0,0.472775363535873,1.72371686620732,1.16641845353302,5.90324982773194,40.7441037474366,15.9187298985538,1.52581736317083,0.552896299656123,0.591095237907095,37.0761321190214,0,2.37020365273626,0.230850775511391,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.652931232636591,0,0.216388639742091,0,0,0,0.296521128680622,0,0,2.15683625538167,0,17.1013045379498,0,0.782658475728359,0.242780379534093,0.394584402849391,0,5.50930970934882,1.0741718536843,1.9542044523884,0.103688191397247,1.32930774541437,1.65495977937749,2.19753042885058,2.38944859545918,1.99226682220855,4.02156551738102,0,1.7638631534588,1.48000651186684,1.7472666824203,0.171986032471617,0.0967563312890851,0,0,0.0969890164884194,2.64768380074501,0,2.05562886970126,0.397429223405979,43.8743815974239,0.782205530939212,0,2.13452994739353,1.79828648623917,0.144090417154106,0.229073192331831,3.08870996151536,0,0.869767748958028,0,3.94122197613481,4.07951100618099,0.305994652908965,0,7.805463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| |||
|short_description=p1@KCNH3 | |||
}} |
Revision as of 13:20, 11 January 2014
Short description: | p1@KCNH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNH3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -81bp_to_ENST00000257981, NM_012284, uc001ruh.1, uc010smj.1_5end |
EntrezGene: | KCNH3 |
HGNC: | 6252 |
UniProt: | Q9ULD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.48e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.48e-21 | 42 |
defensive cell | 7.45e-17 | 48 |
phagocyte | 7.45e-17 | 48 |
monopoietic cell | 3.03e-11 | 59 |
monocyte | 3.03e-11 | 59 |
monoblast | 3.03e-11 | 59 |
promonocyte | 3.03e-11 | 59 |
myeloid leukocyte | 3.07e-11 | 72 |
macrophage dendritic cell progenitor | 1.52e-10 | 61 |
granulocyte monocyte progenitor cell | 2.45e-09 | 67 |
nongranular leukocyte | 2.98e-09 | 115 |
myeloid lineage restricted progenitor cell | 5.32e-09 | 66 |
leukocyte | 8.58e-09 | 136 |
intermediate monocyte | 7.90e-08 | 9 |
CD14-positive, CD16-positive monocyte | 7.90e-08 | 9 |
mature alpha-beta T cell | 6.59e-07 | 18 |
alpha-beta T cell | 6.59e-07 | 18 |
immature T cell | 6.59e-07 | 18 |
mature T cell | 6.59e-07 | 18 |
immature alpha-beta T cell | 6.59e-07 | 18 |
hematopoietic lineage restricted progenitor cell | 8.41e-07 | 120 |