FFCP PHASE1:Hg19::chr12:96830430..96830450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr12:96830430..96830450,+ | |||
|id=chr12:96830430..96830450,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.39e-47!24;CL:0000115!1.27e-37!35;CL:0000071!2.35e-35!18;CL:0002546!2.35e-35!18;CL:0000222!2.71e-34!119;CL:0000359!5.27e-31!32;CL:0002078!5.08e-28!44;CL:0000192!1.48e-23!42;CL:0000514!1.48e-23!42;CL:0000213!1.38e-19!57;CL:0000215!1.38e-19!57;CL:1000413!4.07e-18!9;CL:0002539!5.22e-18!10;CL:0000187!6.13e-18!54;CL:0000183!2.87e-17!59;CL:0000393!9.52e-17!60;CL:0000211!9.52e-17!60;CL:0000680!1.42e-16!57;CL:0000056!1.42e-16!57;CL:0000355!1.42e-16!57;CL:0000220!1.63e-13!246;CL:0002321!2.83e-13!248;CL:0002543!4.26e-13!6;CL:0005020!6.59e-13!6;CL:0002138!6.59e-13!6;CL:0005022!6.59e-13!6;CL:0002544!1.21e-12!6;CL:0002595!3.32e-10!5;CL:0002494!6.61e-10!16;CL:0000569!1.06e-07!4;CL:0000011!1.06e-07!4;CL:0002594!1.87e-07!4;CL:0002144!2.12e-07!3;CL:0002618!2.39e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.10e-94;24!CL:0000071;1.94e-70;18!CL:0000115;1.21e-63;36!CL:0002078;5.64e-38;45!CL:1000413;3.50e-35;9!CL:0002539;7.42e-35;10!CL:0000359;1.76e-29;32!CL:0000213;3.74e-27;58!CL:0000215;3.74e-27;58!CL:0002543;6.08e-25;6!CL:0002138;1.26e-24;6!CL:0002544;5.32e-24;6!CL:0000192;1.06e-16;43!CL:0002144;1.97e-13;3!CL:0002618;2.68e-13;3!CL:0002595;5.48e-13;5!CL:0000076;1.00e-10;63!CL:0002545;4.79e-09;2!CL:0002593;5.85e-09;2!CL:0000187;5.04e-08;55!CL:0002494;6.60e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.88e-94,24;CL:0000115,2.04e-76,36;CL:0000071,1.72e-70,18;CL:0002546,1.72e-70,18;CL:0002078,9.63e-60,45;CL:0000222,2.95e-54,121;CL:0000213,8.54e-45,58;CL:0000215,8.54e-45,58;CL:1000413,3.24e-35,9;CL:0002539,5.40e-35,10;CL:0000359,6.06e-30,32;CL:0002543,5.61e-25,6;CL:0005020,1.37e-24,6;CL:0002138,1.37e-24,6;CL:0005022,1.37e-24,6;CL:0002544,4.72e-24,6;CL:0002321,1.20e-23,250;CL:0000192,3.02e-21,43;CL:0000514,3.02e-21,43;CL:0000076,7.46e-17,63;CL:0000187,9.66e-16,55;CL:0000680,1.01e-14,58;CL:0000056,1.01e-14,58;CL:0000355,1.01e-14,58;CL:0000393,8.29e-14,61;CL:0000211,8.29e-14,61;CL:0002144,2.06e-13,3;CL:0002618,2.63e-13,3;CL:0002595,5.65e-13,5;CL:0002545,4.60e-09,2;CL:0002593,6.09e-09,2;CL:0002494,7.01e-08,16 | |||
|ontology_enrichment_development_v019=CL:0002546;1.94e-70;18!CL:0005022;1.26e-24;6!CL:0000514;1.06e-16;43!CL:0000222;9.61e-15;121!CL:0000355;8.37e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.79e-75!69;UBERON:0001981!1.02e-67!60;UBERON:0007500!1.02e-67!60;UBERON:0004537!1.02e-67!60;UBERON:0006965!1.02e-67!60;UBERON:0004872!3.50e-64!84;UBERON:0002049!2.94e-63!79;UBERON:0007798!2.94e-63!79;UBERON:0004535!7.32e-56!110;UBERON:0001009!7.44e-54!113;UBERON:0001637!1.77e-51!42;UBERON:0003509!1.77e-51!42;UBERON:0004572!1.77e-51!42;UBERON:0000025!1.41e-44!194;UBERON:0004573!4.67e-43!33;UBERON:0004571!4.67e-43!33;UBERON:0003914!1.89e-42!118;UBERON:0004111!8.31e-42!241;UBERON:0001986!2.35e-35!18;UBERON:0004638!2.35e-35!18;UBERON:0004852!2.35e-35!18;UBERON:0000477!1.85e-34!286;UBERON:0000487!8.22e-28!22;UBERON:0000947!1.27e-26!21;UBERON:0010191!1.27e-26!21;UBERON:0000483!2.68e-26!309;UBERON:0000119!8.08e-26!312;UBERON:0006914!9.44e-24!25;UBERON:0000490!2.52e-22!138;UBERON:0003915!4.07e-18!9;UBERON:0004700!4.07e-18!9;UBERON:0001917!4.07e-18!9;UBERON:0004237!5.22e-18!10;UBERON:0004695!5.22e-18!10;UBERON:0002111!5.22e-18!10;UBERON:0004178!5.22e-18!10;UBERON:0003081!1.22e-16!216;UBERON:0001135!1.37e-15!15;UBERON:0002385!2.08e-15!63;UBERON:0001015!2.08e-15!63;UBERON:0000383!2.08e-15!63;UBERON:0001134!5.72e-15!61;UBERON:0002036!5.72e-15!61;UBERON:0003082!5.72e-15!61;UBERON:0004290!2.87e-13!70;UBERON:0003513!1.71e-11!8;UBERON:0000467!3.31e-11!625;UBERON:0000480!3.80e-11!626;UBERON:0000914!7.22e-11!83;UBERON:0002329!7.22e-11!83;UBERON:0003077!7.22e-11!83;UBERON:0003059!7.22e-11!83;UBERON:0007282!7.22e-11!83;UBERON:0009618!7.22e-11!83;UBERON:0007285!7.22e-11!83;UBERON:0003834!3.32e-10!5;UBERON:0001533!3.32e-10!5;UBERON:0000486!3.34e-10!82;UBERON:0000468!7.92e-10!659;UBERON:0001473!2.10e-09!8;UBERON:0004536!2.10e-09!8;UBERON:0006558!2.10e-09!8;UBERON:0001049!6.43e-09!57;UBERON:0005068!6.43e-09!57;UBERON:0006241!6.43e-09!57;UBERON:0007135!6.43e-09!57;UBERON:0000948!1.57e-08!24;UBERON:0005498!1.57e-08!24;UBERON:0004140!1.57e-08!24;UBERON:0009881!1.57e-08!24;UBERON:0004141!1.57e-08!24;UBERON:0003084!1.57e-08!24;UBERON:0007005!1.57e-08!24;UBERON:0004139!1.57e-08!24;UBERON:0004291!1.57e-08!24;UBERON:0001638!2.33e-08!9;UBERON:0003920!2.33e-08!9;UBERON:0004582!2.33e-08!9;UBERON:0002780!3.22e-08!41;UBERON:0001890!3.22e-08!41;UBERON:0006240!3.22e-08!41;UBERON:0000922!3.87e-08!612;UBERON:0001893!4.07e-08!34;UBERON:0000923!4.71e-08!604;UBERON:0005291!4.71e-08!604;UBERON:0006598!4.71e-08!604;UBERON:0002532!4.71e-08!604;UBERON:0002050!5.33e-08!605;UBERON:0005423!5.33e-08!605;UBERON:0003080!6.25e-08!42;UBERON:0002616!1.56e-07!59;UBERON:0001310!1.87e-07!4;UBERON:0001915!2.12e-07!3;UBERON:0001982!2.12e-07!3;UBERON:0002465!2.61e-07!10;UBERON:0007100!2.86e-07!27;UBERON:0002791!2.90e-07!33;UBERON:0000481!3.38e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.94e-70;18!UBERON:0001986;1.94e-70;18!UBERON:0004852;1.94e-70;18!UBERON:0000487;8.76e-57;22!UBERON:0004573;1.71e-56;33!UBERON:0004571;1.71e-56;33!UBERON:0007500;1.52e-49;56!UBERON:0001981;1.52e-49;56!UBERON:0004537;1.52e-49;56!UBERON:0006914;2.07e-49;25!UBERON:0000947;2.24e-48;21!UBERON:0010191;2.24e-48;21!UBERON:0000055;4.52e-48;65!UBERON:0001637;1.04e-44;42!UBERON:0003509;1.04e-44;42!UBERON:0004572;1.04e-44;42!UBERON:0003915;3.50e-35;9!UBERON:0004700;3.50e-35;9!UBERON:0001917;3.50e-35;9!UBERON:0004237;7.42e-35;10!UBERON:0004695;7.42e-35;10!UBERON:0002111;7.42e-35;10!UBERON:0004178;7.42e-35;10!UBERON:0002049;3.29e-34;75!UBERON:0007798;3.29e-34;75!UBERON:0000490;2.44e-33;33!UBERON:0003914;2.20e-31;74!UBERON:0001135;1.30e-22;15!UBERON:0001009;1.88e-18;112!UBERON:0001473;2.65e-18;8!UBERON:0004536;2.65e-18;8!UBERON:0006558;2.65e-18;8!UBERON:0004535;4.42e-18;109!UBERON:0000025;1.87e-17;93!UBERON:0001638;2.13e-16;9!UBERON:0003920;2.13e-16;9!UBERON:0004582;2.13e-16;9!UBERON:0002465;1.67e-14;10!UBERON:0003513;8.26e-14;7!UBERON:0010523;1.97e-13;3!UBERON:0001915;1.97e-13;3!UBERON:0001982;1.97e-13;3!UBERON:0003834;5.48e-13;5!UBERON:0001533;5.48e-13;5!UBERON:0004111;2.84e-11;130!UBERON:0002385;1.44e-09;31!UBERON:0001015;1.44e-09;31!UBERON:0000383;1.44e-09;31!UBERON:0005800;4.79e-09;2!UBERON:0001515;4.79e-09;2!UBERON:0002456;5.85e-09;2!UBERON:0000119;1.75e-08;139!UBERON:0002066;3.89e-08;5!UBERON:0000483;4.89e-08;136 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.30e-99,68;UBERON:0002049,2.75e-85,78;UBERON:0007798,2.75e-85,78;UBERON:0007500,3.03e-83,59;UBERON:0001981,3.03e-83,59;UBERON:0004537,3.03e-83,59;UBERON:0006965,3.03e-83,59;UBERON:0004535,7.97e-71,109;UBERON:0004872,1.30e-70,83;UBERON:0004638,1.72e-70,18;UBERON:0001986,1.72e-70,18;UBERON:0004852,1.72e-70,18;UBERON:0001009,1.14e-68,112;UBERON:0004573,3.79e-61,33;UBERON:0004571,3.79e-61,33;UBERON:0001637,1.65e-60,42;UBERON:0003509,1.65e-60,42;UBERON:0004572,1.65e-60,42;UBERON:0000487,7.96e-57,22;UBERON:0003914,1.08e-52,117;UBERON:0006914,1.91e-49,25;UBERON:0000947,1.43e-48,21;UBERON:0010191,1.43e-48,21;UBERON:0003915,3.24e-35,9;UBERON:0004700,3.24e-35,9;UBERON:0001917,3.24e-35,9;UBERON:0004237,5.40e-35,10;UBERON:0004695,5.40e-35,10;UBERON:0002111,5.40e-35,10;UBERON:0004178,5.40e-35,10;UBERON:0004111,3.87e-31,240;UBERON:0000025,8.24e-30,192;UBERON:0000490,5.97e-28,148;UBERON:0003081,3.54e-26,203;UBERON:0001135,1.06e-22,15;UBERON:0001473,2.82e-18,8;UBERON:0004536,2.82e-18,8;UBERON:0006558,2.82e-18,8;UBERON:0001638,2.02e-16,9;UBERON:0003920,2.02e-16,9;UBERON:0004582,2.02e-16,9;UBERON:0000483,3.43e-16,306;UBERON:0000119,6.12e-16,309;UBERON:0000926,1.80e-15,315;UBERON:0004120,1.80e-15,315;UBERON:0006603,1.80e-15,315;UBERON:0002465,1.76e-14,10;UBERON:0007503,2.06e-14,78;UBERON:0003513,8.27e-14,7;UBERON:0001134,1.60e-13,62;UBERON:0002036,1.60e-13,62;UBERON:0003082,1.60e-13,62;UBERON:0010523,2.06e-13,3;UBERON:0001915,2.06e-13,3;UBERON:0001982,2.06e-13,3;UBERON:0002385,5.59e-13,64;UBERON:0001015,5.59e-13,64;UBERON:0000383,5.59e-13,64;UBERON:0003834,5.65e-13,5;UBERON:0001533,5.65e-13,5;UBERON:0002329,6.95e-13,71;UBERON:0003059,6.95e-13,71;UBERON:0007282,6.95e-13,71;UBERON:0004290,6.95e-13,71;UBERON:0009618,6.95e-13,71;UBERON:0003077,1.20e-12,72;UBERON:0007285,1.20e-12,72;UBERON:0007524,2.03e-12,73;UBERON:0000486,1.96e-10,83;UBERON:0005800,4.60e-09,2;UBERON:0001515,4.60e-09,2;UBERON:0002456,6.09e-09,2;UBERON:0005256,1.49e-08,122;UBERON:0002066,3.84e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,2.92124036154949,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,24.8453009208381,6.881876760849,14.9270415691266,2.82653970962005,8.38998872419812,6.05259692268148,11.7037181260614,13.6960882359744,13.1633517194083,20.4179573786449,21.7527831238939,15.9657142200888,11.470916704764,7.72092468726324,5.67099363517232,31.4335043559961,11.900056749187,9.1215299191491,13.7984973719295,20.8838445104988,13.5569290508501,0,0,0,0,0.25326102332916,2.91300197789081,0,0,0,2.1349799145941,0.24666754841716,0,3.09834545760283,1.47115712802113,0,0,0,0,2.85235910772225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,17.1796072835678,9.72269576410883,4.37584550139576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,3.40187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,1.39453664789186,1.88887408098384,1.3940745403212,4.92853728281742,3.72614221221915,1.73986598415015,0.37064843820784,0.572499546967965,0,0,0,0,0,0.636406495851874,3.92474320099615,0,0,0.117812402345686,2.22400729730648,0,2.52755073743389,0,5.36169677188826,5.28250733783777,0,0,0,0.551365343546124,4.64407282668854,6.57676327880644,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0,0,0.7133421029625,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08012009519708,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0.19871461170299,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915360273587694,0.302461847526478,0.621748802331122,2.21782724984451,0.318593534327405,0,0.155262956876259,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.263091094251396,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:96830430..96830450,+ | |||
}} |
Revision as of 15:21, 11 January 2014
Short description: | p@chr12:96830430..96830450, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96830430..96830450, + |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data