FFCP PHASE1:Hg19::chr21:27011923..27011947,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14686 | |||
|TSSclassifier=strong | |||
|UniProt=B4DGT9 | |||
|association_with_transcript=13bp_to_ENST00000425221_5end | |||
|description=CAGE_peak_8_at_JAM2_5end | |||
|id=chr21:27011923..27011947,+ | |||
|ontology_enrichment_celltype=CL:0000133!5.31e-07!59;CL:0000047!5.98e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.04e-07;3!CL:0002605;5.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.41e-07,3;CL:0002605,7.18e-07,3;CL:0000047,8.27e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.71e-07;3!UBERON:0003057;1.71e-07;3!UBERON:0006601;3.65e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.58e-36!94;UBERON:0001016!8.58e-36!94;UBERON:0001017!1.25e-35!82;UBERON:0005743!6.42e-34!86;UBERON:0007023!1.68e-33!115;UBERON:0001049!2.51e-30!57;UBERON:0005068!2.51e-30!57;UBERON:0006241!2.51e-30!57;UBERON:0007135!2.51e-30!57;UBERON:0000955!2.15e-26!69;UBERON:0006238!2.15e-26!69;UBERON:0003075!5.88e-26!86;UBERON:0007284!5.88e-26!86;UBERON:0002616!7.40e-26!59;UBERON:0002346!2.48e-25!90;UBERON:0003080!4.61e-23!42;UBERON:0002020!5.46e-23!34;UBERON:0003528!5.46e-23!34;UBERON:0001893!5.50e-23!34;UBERON:0002780!2.50e-22!41;UBERON:0001890!2.50e-22!41;UBERON:0006240!2.50e-22!41;UBERON:0002791!2.74e-22!33;UBERON:0001869!6.57e-22!32;UBERON:0003056!6.30e-19!61;UBERON:0004121!3.07e-18!169;UBERON:0000924!3.70e-18!173;UBERON:0006601!3.70e-18!173;UBERON:0000956!3.53e-17!25;UBERON:0000203!3.53e-17!25;UBERON:0002619!6.97e-15!22;UBERON:0000153!4.69e-14!129;UBERON:0007811!4.69e-14!129;UBERON:0001950!7.29e-14!20;UBERON:0000033!1.76e-13!123;UBERON:0003076!2.26e-08!15;UBERON:0003057!2.26e-08!15;UBERON:0000064!5.43e-08!219;UBERON:0002308!2.93e-07!9;UBERON:0000125!2.93e-07!9;UBERON:0002420!4.03e-07!9;UBERON:0007245!4.03e-07!9;UBERON:0010009!4.03e-07!9;UBERON:0010011!4.03e-07!9;UBERON:0000454!4.03e-07!9;UBERON:0001871!4.80e-07!7;UBERON:0002298!8.31e-07!8;UBERON:0004732!9.56e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.39e-19;34!UBERON:0001869;2.25e-19;32!UBERON:0003528;3.67e-19;34!UBERON:0002020;3.67e-19;34!UBERON:0002791;1.24e-17;32!UBERON:0000956;5.46e-15;25!UBERON:0000203;5.46e-15;25!UBERON:0002780;5.46e-13;41!UBERON:0001890;5.46e-13;41!UBERON:0000073;8.07e-13;53!UBERON:0002616;8.07e-13;53!UBERON:0001950;3.17e-12;20!UBERON:0001017;4.05e-12;75!UBERON:0000955;6.52e-12;68!UBERON:0001016;6.95e-12;83!UBERON:0002619;6.57e-11;22!UBERON:0000922;7.42e-10;49!UBERON:0004732;5.32e-09;13!UBERON:0002298;8.65e-09;6!UBERON:0007023;3.44e-08;114!UBERON:0003124;1.04e-07;3!UBERON:0000920;1.04e-07;3!UBERON:0000125;1.09e-07;9!UBERON:0002308;1.09e-07;9!UBERON:0001871;1.14e-07;6!UBERON:0004733;1.21e-07;12!UBERON:0002028;1.21e-07;12!UBERON:0002240;1.71e-07;3!UBERON:0005174;1.71e-07;3!UBERON:0001137;1.71e-07;3!UBERON:0002021;3.56e-07;5!UBERON:0000988;5.81e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.77e-35,89;UBERON:0001017,4.74e-32,81;UBERON:0001049,4.11e-29,56;UBERON:0005068,4.11e-29,56;UBERON:0006241,4.11e-29,56;UBERON:0007135,4.11e-29,56;UBERON:0000073,9.59e-25,53;UBERON:0002616,9.59e-25,53;UBERON:0003075,4.35e-24,82;UBERON:0007284,4.35e-24,82;UBERON:0002346,1.70e-22,86;UBERON:0000955,5.41e-22,68;UBERON:0006238,5.41e-22,68;UBERON:0003528,7.09e-21,34;UBERON:0002020,7.09e-21,34;UBERON:0001893,7.17e-21,34;UBERON:0001869,4.00e-20,32;UBERON:0010371,2.07e-19,104;UBERON:0007023,2.42e-19,114;UBERON:0002780,2.18e-18,41;UBERON:0001890,2.18e-18,41;UBERON:0003080,2.18e-18,41;UBERON:0006240,2.18e-18,41;UBERON:0002791,4.41e-18,32;UBERON:0004121,4.82e-17,171;UBERON:0000924,4.82e-17,171;UBERON:0006601,4.82e-17,171;UBERON:0010314,4.62e-15,132;UBERON:0000956,1.19e-14,25;UBERON:0000203,1.19e-14,25;UBERON:0003056,3.85e-14,61;UBERON:0011216,2.39e-12,223;UBERON:0003076,2.55e-12,15;UBERON:0003057,2.55e-12,15;UBERON:0001950,6.11e-12,20;UBERON:0002619,1.18e-10,22;UBERON:0004732,5.05e-09,13;UBERON:0002298,1.19e-08,6;UBERON:0000125,8.79e-08,9;UBERON:0002308,8.79e-08,9;UBERON:0004733,1.10e-07,12;UBERON:0002028,1.10e-07,12;UBERON:0007277,1.10e-07,12;UBERON:0000920,1.41e-07,3;UBERON:0001871,1.74e-07,6;UBERON:0002240,2.60e-07,3;UBERON:0005174,2.60e-07,3;UBERON:0001137,2.60e-07,3;UBERON:0002021,3.55e-07,5;UBERON:0000988,9.79e-07,3 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.986680828671798,1.0007329835313,0.893922188854576,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0,1.88072832886853,2.28988789704845,1.64249310087461,1.25542639594803,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0.853460445133014,0,0.574752439954483,0.661044872784862,0,0,0,0,3.96513985737078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.756278537312543,0,0.351339142772504,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0.423863802319124,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,1.34171076742555,0.927708378250397,1.2781333715647,0.725627385107593,0.252320850875628,0.36497735907583,1.56449532329816,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0.927443239800615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,1.77866236955724,1.30139853857622,3.09315525111078,0.502548796003046,3.18969375826582,0,0,0,0.49076596687656,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,3.43143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,1.06337790121334,0.154048617114644,0.307007349452259,0.827019434907183,0.107420244868274,1.30515024522806,1.44885266607372,14.6012538460649,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0.71623345421307,0,0,3.97659059106519,0.562677665642051,0.333926115068718,0,0,1.19548792950642,0.828851746593443,0,0.102268682502155,2.46169610922139,0.933118762985422,0,0,0,0.493217028184668,0,0,3.87733098438087,2.04089815956073,0,0,0,1.44999915086959,0,0,0,0,0.291604613383254,0.694499979733169,1.77148277162768,0.723578631752448,0,0.442317039724898,1.47773809476774,2.63262476584767,0,0,0.769502585037971,0.113942055847001,0,0,0,3.82801391678303,1.28236630762607,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,2.4441205797345,1.77912677208373,1.11207545051853,2.8193926366473,1.88723172345896,1.60515529459758,2.57690890297873,0,0,0,0,1.20990716048664,3.36680037793539,0.568679216656392,0.901940516486955,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.484945082442097,0.441280633457501,1.80784592624426,0,0,1.39283751102933,0,0,0.640358984218058,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,1.80126086612937,0.547621515567972,0,0,1.05154941711726,1.39641200636127,0.458320848023367,1.43574604915363,0.199679000498991,0.429226048136571,0.223171457441873,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0.482259445395058,0.687697182986169,2.07720169014593,0,0,0.789744236554321,0,0.157611414598396,0.472091293214983,0,0,0,2.1440859791201,0,0,0,0,0,1.19730191562487,0.082092520749339,0.170388021785422,0,0,0,2.45637617086946,1.05786081394152,0,0,0.213574825135389,2.04365596629566,1.65695622138878,0,0,0,0,0,0.2506898940227,0,0,0,0,1.22026264901963,0.751145584238999,0.573409195690071,1.66393577305278,2.11127770000704,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0.754703705257725,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0,0,0.310525913752519,0,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0,0,0.928067519756987,0,0.400027764663154,0,0,0,0,0,0.521988583930423,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0.967809053062115,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,1.91841556955478,2.47997066212368,0.629063767423586,3.71312769852847,0.169732529954025,0.212574920101683,0,0,0,0.315446980005013,0,0.352675943690684,0,1.86264752779733,1.41696576325585,0.798169295285756,2.2562800066483,1.76450187355203,2.14387482639075,1.29180516505481,1.42769420259154,0,0,0,0,0.381382095467167,0.690359926060101,0.397832444232549,1.5794168953344,0,0,0,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| |||
|short_description=p8@JAM2 | |||
}} |
Revision as of 13:09, 21 January 2014
Short description: | p8@JAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_JAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000425221_5end |
EntrezGene: | JAM2 |
HGNC: | 14686 |
UniProt: | B4DGT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.41e-07 | 3 |
astrocyte of the cerebral cortex | 7.18e-07 | 3 |
neuronal stem cell | 8.27e-07 | 8 |