FFCP PHASE1:Hg19::chr3:98241713..98241758,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1322 | |||
|TSSclassifier=strong | |||
|UniProt=D6R9K1,D6RIU2,D6RAZ7,D6RB31,F2Z2D9,D6RCP3 | |||
|association_with_transcript=0bp_to_ENST00000502288,ENST00000502980,ENST00000503621,ENST00000503799,ENST00000507411,ENST00000510541,ENST00000511081,ENST00000512147,ENST00000513988_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_CLDND1_5end | |||
|id=chr3:98241713..98241758,- | |||
|ontology_enrichment_celltype=CL:0000738!4.81e-13!140;CL:0002057!8.81e-11!42;CL:0002031!2.13e-10!124;CL:0002087!3.65e-09!119;CL:0000860!1.93e-08!45;CL:0000037!1.04e-07!172;CL:0000566!1.04e-07!172;CL:0002032!1.19e-07!165;CL:0000837!1.19e-07!165;CL:0000084!8.35e-07!25;CL:0000827!8.35e-07!25;CL:0000988!9.45e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.95e-13;33!CL:0002057;6.95e-13;33!CL:0000473;1.80e-08;39!CL:0000234;1.80e-08;39!CL:0000084;8.16e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.95e-14,136;CL:0002031,1.10e-11,120;CL:0000860,8.81e-11,42;CL:0002057,8.81e-11,42;CL:0002087,2.24e-10,115;CL:0000037,1.38e-08,168;CL:0002032,1.54e-08,161;CL:0000837,1.54e-08,161;CL:0000473,1.61e-08,48;CL:0000234,1.61e-08,48;CL:0000766,5.59e-08,72;CL:0000988,7.51e-08,177;CL:0000084,8.35e-07,25;CL:0000827,8.35e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.10e-23!115;UBERON:0001049!3.43e-20!57;UBERON:0005068!3.43e-20!57;UBERON:0006241!3.43e-20!57;UBERON:0007135!3.43e-20!57;UBERON:0001017!4.99e-18!82;UBERON:0005743!2.60e-17!86;UBERON:0002780!3.70e-17!41;UBERON:0001890!3.70e-17!41;UBERON:0006240!3.70e-17!41;UBERON:0000073!4.06e-17!94;UBERON:0001016!4.06e-17!94;UBERON:0003080!4.26e-17!42;UBERON:0002616!9.39e-17!59;UBERON:0000955!1.62e-15!69;UBERON:0006238!1.62e-15!69;UBERON:0001893!7.84e-15!34;UBERON:0002020!7.93e-15!34;UBERON:0003528!7.93e-15!34;UBERON:0002791!3.14e-14!33;UBERON:0001869!1.54e-13!32;UBERON:0003075!1.18e-11!86;UBERON:0007284!1.18e-11!86;UBERON:0002346!7.16e-11!90;UBERON:0002619!1.28e-09!22;UBERON:0000956!1.38e-09!25;UBERON:0000203!1.38e-09!25;UBERON:0001950!1.71e-08!20;UBERON:0003056!2.27e-08!61;UBERON:0000153!1.01e-07!129;UBERON:0007811!1.01e-07!129;UBERON:0004121!2.66e-07!169;UBERON:0000033!2.91e-07!123;UBERON:0002308!4.48e-07!9;UBERON:0000125!4.48e-07!9;UBERON:0000924!5.67e-07!173;UBERON:0006601!5.67e-07!173;UBERON:0002420!7.45e-07!9;UBERON:0007245!7.45e-07!9;UBERON:0010009!7.45e-07!9;UBERON:0010011!7.45e-07!9;UBERON:0000454!7.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.69e-13;34!UBERON:0003528;1.10e-12;34!UBERON:0002020;1.10e-12;34!UBERON:0002780;1.60e-12;41!UBERON:0001890;1.60e-12;41!UBERON:0002791;2.93e-12;32!UBERON:0001869;3.12e-12;32!UBERON:0000073;2.84e-11;53!UBERON:0002616;2.84e-11;53!UBERON:0002619;1.22e-09;22!UBERON:0000956;1.31e-09;25!UBERON:0000203;1.31e-09;25!UBERON:0001950;1.63e-08;20!UBERON:0001017;2.26e-08;75!UBERON:0000955;2.33e-07;68!UBERON:0000125;4.47e-07;9!UBERON:0002308;4.47e-07;9!UBERON:0002420;7.43e-07;9!UBERON:0007245;7.43e-07;9!UBERON:0010009;7.43e-07;9!UBERON:0010011;7.43e-07;9!UBERON:0000454;7.43e-07;9!UBERON:0007023;8.64e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.45e-22,114;UBERON:0001049,3.20e-20,56;UBERON:0005068,3.20e-20,56;UBERON:0006241,3.20e-20,56;UBERON:0007135,3.20e-20,56;UBERON:0000073,2.00e-18,53;UBERON:0002616,2.00e-18,53;UBERON:0001017,5.44e-18,81;UBERON:0001016,1.05e-17,89;UBERON:0002780,3.70e-17,41;UBERON:0001890,3.70e-17,41;UBERON:0003080,3.70e-17,41;UBERON:0006240,3.70e-17,41;UBERON:0000955,1.75e-15,68;UBERON:0006238,1.75e-15,68;UBERON:0001893,7.84e-15,34;UBERON:0003528,7.93e-15,34;UBERON:0002020,7.93e-15,34;UBERON:0002791,1.38e-13,32;UBERON:0001869,1.54e-13,32;UBERON:0003075,1.72e-11,82;UBERON:0007284,1.72e-11,82;UBERON:0002346,1.09e-10,86;UBERON:0002619,1.28e-09,22;UBERON:0000956,1.38e-09,25;UBERON:0000203,1.38e-09,25;UBERON:0003056,8.92e-09,61;UBERON:0001950,1.71e-08,20;UBERON:0010371,3.75e-08,104;UBERON:0000125,4.48e-07,9;UBERON:0002308,4.48e-07,9;UBERON:0002420,7.45e-07,9;UBERON:0007245,7.45e-07,9;UBERON:0010009,7.45e-07,9;UBERON:0010011,7.45e-07,9;UBERON:0000454,7.45e-07,9 | |||
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| |||
|short_description=p1@CLDND1 | |||
}} |
Revision as of 20:04, 21 January 2014
Short description: | p1@CLDND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDND1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000502288, ENST00000502980, ENST00000503621, ENST00000503799, ENST00000507411, ENST00000510541, ENST00000511081, ENST00000512147, ENST00000513988_5end |
EntrezGene: | CLDND1 |
HGNC: | 1322 |
UniProt: | D6R9K1D6RIU2D6RAZ7D6RB31F2Z2D9D6RCP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.95e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.10e-11 | 120 |
classical monocyte | 8.81e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.81e-11 | 42 |
nongranular leukocyte | 2.24e-10 | 115 |
hematopoietic stem cell | 1.38e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.54e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-08 | 161 |
defensive cell | 1.61e-08 | 48 |
phagocyte | 1.61e-08 | 48 |
myeloid leukocyte | 5.59e-08 | 72 |
hematopoietic cell | 7.51e-08 | 177 |
T cell | 8.35e-07 | 25 |
pro-T cell | 8.35e-07 | 25 |