FFCP PHASE1:Mm9::chr9:29770697..29770726,-: Difference between revisions
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{{FFCP|EntrezGene=235106|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG33,Q3USC2|association_with_transcript=0bp_to_ENSMUST00000075069,ENSMUST00000124119,ENSMUST00000146651,ENSMUST00000151977,ENSMUST00000152513,NM_172290,uc009oqu.1,uc009oqv.1,uc009oqx.1_5end|description=CAGE_peak_1_at_Ntm_5end|id=chr9:29770697..29770726,-|ontology_enrichment_celltype=CL:0000117!3.97e-13!23;CL:0000337!3.97e-13!23;CL:0000540!1.29e-10!33;CL:0000047!1.29e-10!33;CL:0000031!1.29e-10!33;CL:0000404!1.29e-10!33;CL:0000221!2.69e-08!44;CL:0000133!2.69e-08!44;CL:0002319!3.06e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-15,23;CL:0000337,1.33e-15,23;CL:0000540,2.29e-10,33;CL:0000047,2.29e-10,33;CL:0000031,2.29e-10,33;CL:0000404,2.29e-10,33;CL:0000221,4.68e-08,44;CL:0000133,4.68e-08,44;CL:0002319,5.58e-08,43;CL:0000393,3.09e-07,39;CL:0000211,3.09e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.11e-24!73;UBERON:0005743!1.11e-24!73;UBERON:0000073!2.68e-23!75;UBERON:0001016!2.68e-23!75;UBERON:0000033!6.33e-23!63;UBERON:0001049!6.25e-22!52;UBERON:0005068!6.25e-22!52;UBERON:0006241!6.25e-22!52;UBERON:0007135!6.25e-22!52;UBERON:0002346!1.70e-21!71;UBERON:0003075!1.70e-21!71;UBERON:0007284!1.70e-21!71;UBERON:0004121!6.86e-21!102;UBERON:0000924!6.86e-21!102;UBERON:0006601!6.86e-21!102;UBERON:0000955!1.08e-20!50;UBERON:0006238!1.08e-20!50;UBERON:0002616!4.31e-20!49;UBERON:0003056!2.63e-19!49;UBERON:0002020!4.29e-18!34;UBERON:0003080!8.69e-17!40;UBERON:0002780!3.89e-16!39;UBERON:0001890!3.89e-16!39;UBERON:0006240!3.89e-16!39;UBERON:0002791!3.38e-15!29;UBERON:0003528!3.38e-15!29;UBERON:0001893!3.38e-15!29;UBERON:0000025!3.42e-12!114;UBERON:0004111!3.28e-11!122;UBERON:0007811!3.43e-11!86;UBERON:0000956!1.06e-10!21;UBERON:0001869!1.06e-10!21;UBERON:0000203!1.06e-10!21;UBERON:0000153!1.41e-10!94;UBERON:0002619!1.14e-08!17;UBERON:0002021!2.20e-08!10;UBERON:0000411!2.20e-08!10;UBERON:0001950!2.20e-08!10;UBERON:0000468!2.24e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.41e-28,64;UBERON:0003075,4.41e-28,64;UBERON:0007284,4.41e-28,64;UBERON:0000073,5.37e-27,54;UBERON:0001017,7.02e-26,73;UBERON:0001049,1.56e-25,52;UBERON:0005068,1.56e-25,52;UBERON:0006241,1.56e-25,52;UBERON:0007135,1.56e-25,52;UBERON:0001016,1.76e-24,75;UBERON:0004121,8.63e-23,95;UBERON:0000924,8.63e-23,95;UBERON:0006601,8.63e-23,95;UBERON:0010371,3.13e-22,73;UBERON:0003056,4.68e-22,49;UBERON:0000955,7.74e-22,47;UBERON:0006238,7.74e-22,47;UBERON:0002020,1.01e-21,34;UBERON:0002616,3.95e-21,46;UBERON:0003080,5.53e-19,40;UBERON:0010314,1.12e-18,92;UBERON:0002780,3.33e-18,39;UBERON:0001890,3.33e-18,39;UBERON:0006240,3.33e-18,39;UBERON:0003528,3.37e-18,29;UBERON:0002791,3.37e-18,29;UBERON:0001893,3.37e-18,29;UBERON:0000956,9.79e-13,21;UBERON:0001869,9.79e-13,21;UBERON:0000203,9.79e-13,21;UBERON:0000025,3.36e-12,114;UBERON:0004111,1.28e-10,122;UBERON:0002619,2.89e-10,17;UBERON:0002021,7.57e-10,10;UBERON:0000411,7.57e-10,10;UBERON:0001950,7.57e-10,10;UBERON:0003076,4.23e-07,12;UBERON:0003057,4.23e-07,12|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9382034960763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0.699932108126813,2.87505128729943,0,0,0,0,0,0,44.1049884673923,58.7179986991957,46.9035238594573,0.338844532069132,0,0,0,0,3.59520132622086,8.06858441175265,29.2404706709907,24.0310570230409,28.8145197051393,96.5500327284856,97.8447636415648,26.70299422886,23.4821403994679,19.3035945188104,69.3730050296149,95.6378162258056,98.6153943505083,73.0650034025274,93.8663223360723,100.536280517455,67.2831027593328,66.4059879837382,68.3008167562341,60.6934886075755,127.137910953599,43.2446714314697,0.151452386666368,0,1.15945795480671,7.74381489283248,0,0.539703191637817,1.29955283489534,1.79210754838934,4.35377702408431,0,0,0,1.40843419776681,0,0,0,0,0,0,4.45317130904334,0.258937883647172,0.29688427812965,0.867426633830679,0.608930956624282,0,0,0.940709657085638,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,136.728632204393,149.963842078434,0.255457055208591,0,0,0,132.564715873268,137.707681448407,64.9633000423509,183.558482123044,221.961016962727,128.413011537808,119.247328354802,1.73126918545538,0.373220911830279,0,8.83855794723191,2.34216797332867,3.21862946206862,5.22180176435513,8.59017461663576,14.6958838166868,13.5800543501941,13.118241438362,23.2833033665114,0.431135985865684,2.26927296201383,0.879755620819744,0.219195732427575,1.11218899690239,0,0.823128545631774,0.398068533636986,0,0,0,1.65700618028402,1.64168241986767,1.44049649168812,1.89395788468168,1.57411385397923,1.85120535464854,2.55787339225449,1.87791380979733,1.05088808130453,0.822799249567402,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.402619256281115,109.140483304782,44.2489833230923,0,0,1.70630600428187,1.62565670302307,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0,0.7540056264008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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:235106 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG33,uniprot:Q3USC2 | |||
|association_with_transcript=0bp_to_ENSMUST00000075069,ENSMUST00000124119,ENSMUST00000146651,ENSMUST00000151977,ENSMUST00000152513,NM_172290,uc009oqu.1,uc009oqv.1,uc009oqx.1_5end | |||
|cluster_id=chr9:29770697..29770726,- | |||
|description=CAGE_peak_1_at_Ntm_5end | |||
|id=chr9:29770697..29770726,- | |||
|ontology_enrichment_celltype=CL:0000117!3.97e-13!23;CL:0000337!3.97e-13!23;CL:0000540!1.29e-10!33;CL:0000047!1.29e-10!33;CL:0000031!1.29e-10!33;CL:0000404!1.29e-10!33;CL:0000221!2.69e-08!44;CL:0000133!2.69e-08!44;CL:0002319!3.06e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-15,23;CL:0000337,1.33e-15,23;CL:0000540,2.29e-10,33;CL:0000047,2.29e-10,33;CL:0000031,2.29e-10,33;CL:0000404,2.29e-10,33;CL:0000221,4.68e-08,44;CL:0000133,4.68e-08,44;CL:0002319,5.58e-08,43;CL:0000393,3.09e-07,39;CL:0000211,3.09e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-24!73;UBERON:0005743!1.11e-24!73;UBERON:0000073!2.68e-23!75;UBERON:0001016!2.68e-23!75;UBERON:0000033!6.33e-23!63;UBERON:0001049!6.25e-22!52;UBERON:0005068!6.25e-22!52;UBERON:0006241!6.25e-22!52;UBERON:0007135!6.25e-22!52;UBERON:0002346!1.70e-21!71;UBERON:0003075!1.70e-21!71;UBERON:0007284!1.70e-21!71;UBERON:0004121!6.86e-21!102;UBERON:0000924!6.86e-21!102;UBERON:0006601!6.86e-21!102;UBERON:0000955!1.08e-20!50;UBERON:0006238!1.08e-20!50;UBERON:0002616!4.31e-20!49;UBERON:0003056!2.63e-19!49;UBERON:0002020!4.29e-18!34;UBERON:0003080!8.69e-17!40;UBERON:0002780!3.89e-16!39;UBERON:0001890!3.89e-16!39;UBERON:0006240!3.89e-16!39;UBERON:0002791!3.38e-15!29;UBERON:0003528!3.38e-15!29;UBERON:0001893!3.38e-15!29;UBERON:0000025!3.42e-12!114;UBERON:0004111!3.28e-11!122;UBERON:0007811!3.43e-11!86;UBERON:0000956!1.06e-10!21;UBERON:0001869!1.06e-10!21;UBERON:0000203!1.06e-10!21;UBERON:0000153!1.41e-10!94;UBERON:0002619!1.14e-08!17;UBERON:0002021!2.20e-08!10;UBERON:0000411!2.20e-08!10;UBERON:0001950!2.20e-08!10;UBERON:0000468!2.24e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.41e-28,64;UBERON:0003075,4.41e-28,64;UBERON:0007284,4.41e-28,64;UBERON:0000073,5.37e-27,54;UBERON:0001017,7.02e-26,73;UBERON:0001049,1.56e-25,52;UBERON:0005068,1.56e-25,52;UBERON:0006241,1.56e-25,52;UBERON:0007135,1.56e-25,52;UBERON:0001016,1.76e-24,75;UBERON:0004121,8.63e-23,95;UBERON:0000924,8.63e-23,95;UBERON:0006601,8.63e-23,95;UBERON:0010371,3.13e-22,73;UBERON:0003056,4.68e-22,49;UBERON:0000955,7.74e-22,47;UBERON:0006238,7.74e-22,47;UBERON:0002020,1.01e-21,34;UBERON:0002616,3.95e-21,46;UBERON:0003080,5.53e-19,40;UBERON:0010314,1.12e-18,92;UBERON:0002780,3.33e-18,39;UBERON:0001890,3.33e-18,39;UBERON:0006240,3.33e-18,39;UBERON:0003528,3.37e-18,29;UBERON:0002791,3.37e-18,29;UBERON:0001893,3.37e-18,29;UBERON:0000956,9.79e-13,21;UBERON:0001869,9.79e-13,21;UBERON:0000203,9.79e-13,21;UBERON:0000025,3.36e-12,114;UBERON:0004111,1.28e-10,122;UBERON:0002619,2.89e-10,17;UBERON:0002021,7.57e-10,10;UBERON:0000411,7.57e-10,10;UBERON:0001950,7.57e-10,10;UBERON:0003076,4.23e-07,12;UBERON:0003057,4.23e-07,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9382034960763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0.699932108126813,2.87505128729943,0,0,0,0,0,0,44.1049884673923,58.7179986991957,46.9035238594573,0.338844532069132,0,0,0,0,3.59520132622086,8.06858441175265,29.2404706709907,24.0310570230409,28.8145197051393,96.5500327284856,97.8447636415648,26.70299422886,23.4821403994679,19.3035945188104,69.3730050296149,95.6378162258056,98.6153943505083,73.0650034025274,93.8663223360723,100.536280517455,67.2831027593328,66.4059879837382,68.3008167562341,60.6934886075755,127.137910953599,43.2446714314697,0.151452386666368,0,1.15945795480671,7.74381489283248,0,0.539703191637817,1.29955283489534,1.79210754838934,4.35377702408431,0,0,0,1.40843419776681,0,0,0,0,0,0,4.45317130904334,0.258937883647172,0.29688427812965,0.867426633830679,0.608930956624282,0,0,0.940709657085638,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,136.728632204393,149.963842078434,0.255457055208591,0,0,0,132.564715873268,137.707681448407,64.9633000423509,183.558482123044,221.961016962727,128.413011537808,119.247328354802,1.73126918545538,0.373220911830279,0,8.83855794723191,2.34216797332867,3.21862946206862,5.22180176435513,8.59017461663576,14.6958838166868,13.5800543501941,13.118241438362,23.2833033665114,0.431135985865684,2.26927296201383,0.879755620819744,0.219195732427575,1.11218899690239,0,0.823128545631774,0.398068533636986,0,0,0,1.65700618028402,1.64168241986767,1.44049649168812,1.89395788468168,1.57411385397923,1.85120535464854,2.55787339225449,1.87791380979733,1.05088808130453,0.822799249567402,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.402619256281115,109.140483304782,44.2489833230923,0,0,1.70630600428187,1.62565670302307,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0,0.754005626400808,0.795825888164603,0.58489226135736,0,0.432276099749388,0.597423819763102,1.51734320762465,1.82797620175566,1.1270773567308,0.814605311381257,0.387904974335251,0.771494018793504,0,0,0.156998727841375,0,5.63259991465583,0,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0.575392274901621,2.10775794807546,1.37280706594041,8.62609239164127,6.69853705803306,7.80094182786401,5.05157755894223,2.15276896226295,3.85954817090694,0.739012760666419,2.08440552947533,0,0.169745085775188,0.234690248288502,0.167506257441816,0.714130922658041,0,0,0.221464689648775,0,0.81931657357869,1.03610989119537,1.44649058581512,0,0,0.983528546038072,0.827810238914197,108.853300011723,94.1209843335392,0,0,0.94652465824877,1.95219372148319,1.07711698866399,0,1.33679204449436,1.41538265394416,0.404810701674894,0.876767573733936,0.395287777946524,78.0810798904991,1.56134093729095,0.712262414669021,0.651547837414304,2.14461159864296,0,0.728341908464944,0,0,0,0,0,0.727067458955011,0,0,0,0,0.680879211507576,1.26042765821917,0.646793418913773,1.92903331528433,1.77340233642274,2.49716344642899,3.29098041204242,2.43571959291679,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,114.407411340484,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.86404272657441,0.836353184057875,0,0.809186078308924,1.40510874733071,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.330916980914195,1.75006069509643,1.16243841129958,1.520605129417,0.938857909166032,1.17183946359555,0.314578033277133,0.241584120826006,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0,0.100826185136841,0.292373642219257,0.0962118416403295,0.350630706544707,1.13365191807606,0,0,0,0,0.187682475451182,2.56412273974171,0.214368379079066,0,289.717695262555,311.179859878852,287.020652233138,335.457411934878,166.475052304266,221.330411935182,196.431547567455,189.585226557397,182.616390820634,134.099920743721,0.93408612825759,8.37952234142165,11.9513524027894,12.8846560046196,7.75568701723535,10.1113929647508,13.1125569402953,14.4224540067226,15.7250412699989,16.6780159764106,14.1948407938534,14.5242282867279,17.510961896868,17.158740844505,20.1024141344646,12.3836359733599,14.3696564171621,15.8185560780238,13.5988347265091,15.1614887738429,12.343293085875,15.0854435235437,20.7439485254169,15.4067201630268,18.8218760830661,16.1613901073102,16.6464455314223,17.0995312434598,15.6174730922741,17.9565526930476,12.2194068667899,11.0325020260631,16.3692417267876,14.0992525479229,10.2240503820005,20.7342779688495,8.65546951248011,10.9584237564632,6.69509162240952,1.76473135295612,2.55054619182464 | |||
|short_description=p1@Ntm | |||
}} |
Revision as of 23:33, 4 August 2015
Short description: | p1@Ntm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ntm_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000075069, ENSMUST00000124119, ENSMUST00000146651, ENSMUST00000151977, ENSMUST00000152513, NM_172290, uc009oqu.1, uc009oqv.1, uc009oqx.1_5end |
EntrezGene: | 235106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.33e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-15 | 23 |
neuron | 2.29e-10 | 33 |
neuronal stem cell | 2.29e-10 | 33 |
neuroblast | 2.29e-10 | 33 |
electrically signaling cell | 2.29e-10 | 33 |
ectodermal cell | 4.68e-08 | 44 |
neurectodermal cell | 4.68e-08 | 44 |
neural cell | 5.58e-08 | 43 |
electrically responsive cell | 3.09e-07 | 39 |
electrically active cell | 3.09e-07 | 39 |