FFCP PHASE1:Mm9::chr9:36954842..36954908,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=208076|HGNC=|MCL_coexpression_id=817|UniProt=Q8BG99,Q8BJF5|association_with_transcript=0bp_to_ENSMUST00000039674,ENSMUST00000080754,NM_001029838,NM_148950,uc009oue.1,uc009ouf.1,uc009oug.1,uc009ouh.1_5end|description=CAGE_peak_1_at_Pknox2_5end|id=chr9:36954842..36954908,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.62e-17!52;UBERON:0005068!1.62e-17!52;UBERON:0006241!1.62e-17!52;UBERON:0007135!1.62e-17!52;UBERON:0000033!4.30e-16!63;UBERON:0002346!5.33e-16!71;UBERON:0003075!5.33e-16!71;UBERON:0007284!5.33e-16!71;UBERON:0001017!5.49e-16!73;UBERON:0005743!5.49e-16!73;UBERON:0000073!6.24e-15!75;UBERON:0001016!6.24e-15!75;UBERON:0000955!6.86e-15!50;UBERON:0006238!6.86e-15!50;UBERON:0003056!7.54e-15!49;UBERON:0002616!2.28e-14!49;UBERON:0003080!1.16e-13!40;UBERON:0002780!2.82e-13!39;UBERON:0001890!2.82e-13!39;UBERON:0006240!2.82e-13!39;UBERON:0004121!2.62e-12!102;UBERON:0000924!2.62e-12!102;UBERON:0006601!2.62e-12!102;UBERON:0002020!4.52e-12!34;UBERON:0004111!3.45e-11!122;UBERON:0000025!1.78e-10!114;UBERON:0000468!6.25e-10!333;UBERON:0002791!1.04e-09!29;UBERON:0003528!1.04e-09!29;UBERON:0001893!1.04e-09!29;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0000956!4.52e-08!21;UBERON:0001869!4.52e-08!21;UBERON:0000203!4.52e-08!21;UBERON:0002619!6.03e-08!17;UBERON:0000922!3.55e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-18,64;UBERON:0003075,1.04e-18,64;UBERON:0007284,1.04e-18,64;UBERON:0001049,1.38e-17,52;UBERON:0005068,1.38e-17,52;UBERON:0006241,1.38e-17,52;UBERON:0007135,1.38e-17,52;UBERON:0000073,6.29e-17,54;UBERON:0001017,4.75e-16,73;UBERON:0010371,2.17e-15,73;UBERON:0000955,3.10e-15,47;UBERON:0006238,3.10e-15,47;UBERON:0001016,5.45e-15,75;UBERON:0003056,6.60e-15,49;UBERON:0010314,8.21e-15,92;UBERON:0002616,1.05e-14,46;UBERON:0004121,6.51e-14,95;UBERON:0000924,6.51e-14,95;UBERON:0006601,6.51e-14,95;UBERON:0003080,1.03e-13,40;UBERON:0002780,2.51e-13,39;UBERON:0001890,2.51e-13,39;UBERON:0006240,2.51e-13,39;UBERON:0002020,4.07e-12,34;UBERON:0004111,4.29e-11,122;UBERON:0000025,2.21e-10,114;UBERON:0003528,9.54e-10,29;UBERON:0002791,9.54e-10,29;UBERON:0001893,9.54e-10,29;UBERON:0002021,3.28e-08,10;UBERON:0000411,3.28e-08,10;UBERON:0001950,3.28e-08,10;UBERON:0000956,4.23e-08,21;UBERON:0001869,4.23e-08,21;UBERON:0000203,4.23e-08,21;UBERON:0002619,5.65e-08,17;UBERON:0000922,4.08e-07,320|phase1_expression=17.2960754873177,0,0,0,0,0,0.233612640595526,0.258246646883153,0.985521055061667,1.17032263160997,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,0,0,0,0,21.4309091180696,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,4.60384793810598,2.3440060335714,5.23523743973798,3.52938892818609,3.41522742479223,5.34061388334269,8.18329316841252,11.6583470902442,28.816840089384,17.9950009200049,7.19483016055474,5.93152693383074,7.19390626574849,8.9591309840232,10.062679505548,0,0,0.672187598284928,15.6928255981928,28.0802771139982,11.8604581223812,26.9080892943265,17.4567023159771,17.1134478946668,10.8430250262122,10.6715375533337,0,0,0,10.1864037576258,14.2160772968975,12.6501327016343,13.9056116481641,12.6194976810829,23.7090317055157,28.7129103237098,18.618601480673,20.8943126819755,18.3843757322004,7.70811166995721,13.2794831608595,17.664751324468,24.3989632300859,24.1527379110361,22.9201883044974,9.77140496504833,17.4456409109821,19.0997809721013,35.6500588423138,39.8640706237488,45.6678642271986,1.74170244666323,3.09843396437821,17.971598299504,0.860423876981386,0,0,0,0.448026887097336,11.5164424508037,0.170430322578058,0.259786004602869,0,5.49289337129054,2.56652954828636,7.64415719119937,0,0,0.253359865475099,0,4.68153906848146,13.9826457169473,4.60170631100957,8.50078101154066,6.39377504455497,5.30415643688935,6.48107354376277,9.05433044944927,2.63899841792318,4.44950941921873,9.39895819979426,3.5384422077995,16.8237523945306,12.367125033782,10.6672555689749,1.86391761218122,42.7459963636859,25.761944938055,3.0654846625031,0,0,0,25.1648274200102,26.5350349634803,21.6125485634127,64.3149984711423,54.7231078686907,19.5320761885986,30.6635987198062,24.2377685963753,8.33526703087623,2.77995034277042,11.1534183619831,27.0650521362424,11.9549094305406,18.1862751103403,21.2493793148358,22.7922272156948,21.0106501267154,17.9907311154679,12.6764651662118,26.5148631307396,23.4491539408096,15.1317966780996,7.01426343768239,11.9560317167007,17.7608604926305,9.05441400194951,27.0686602873151,0,0,0.284163499395593,10.9776659443816,9.38104239924385,10.6236616261999,11.3637473080901,8.65762619688577,6.78775296704464,7.20855228726264,6.70683503499048,6.30532848782715,9.37991144506839,13.1333971263276,9.64718833595683,10.3801991071986,13.6121071480451,10.3338942445486,31.1229123874908,26.755199218614,0.660837565967596,2.64450566663544,26.2344548158338,23.9203772016252,12.371276286921,11.0925938542838,10.0070119730192,7.03834816616469,1.42358718463353,6.58795818896044,6.53471542880701,5.17286827306992,6.04388670069272,0.898819408654221,4.75503709724327,3.38540164532424,9.67306294860717,14.1668155636064,18.0332377076929,15.4775009162439,13.3827216145662,11.8529535614638,16.6944458008039,9.15182917473533,3.92496819603437,4.31890073726302,2.07516838961004,3.83743743147016,2.55526693647164,1.12431056192427,1.21716072833102,0.72353147925725,1.2731292589071,2.87696137450811,1.45921704097532,2.47105271869273,7.18841032636773,4.46569137202204,3.74445207737473,1.51547326768267,1.07638448113147,2.8946611281802,25.6806934331581,8.33762211790133,14.6668478797823,16.8047634917436,20.8874320976767,22.2783322397615,19.9956658344252,39.4169968672754,35.7831777121054,29.4548037232871,33.3260466494148,44.7346849173965,33.8462564457155,42.8161213401274,0,0,2.45882136509518,4.96686143348518,21.0321272884007,15.9407893765396,1.47541450839008,28.5292147740941,10.4117712407365,8.58965237452605,20.0343759891503,9.08081432219698,5.56996685205985,7.64306633129848,7.69140333182299,5.55286130031493,7.90575555893047,36.9519513885078,44.7111268406046,22.4362660620742,18.2433394476005,62.6886467295635,2.65490276679926,7.76898035695941,5.13950046840077,2.82907619633847,4.42952839321159,7.37844355065426,7.23599220871019,5.08947221268508,6.06045543254026,6.0046984007805,5.27093042874994,3.09406629744561,20.7668159509811,31.5106914554793,29.7524972700335,45.225114391666,42.7389963077879,27.2904290931168,22.7077648430927,13.700922710157,38.4861601224485,9.74427525973573,26.4634077665954,15.4993077764991,4.35953952078945,5.06628569396509,2.02932984805332,3.11867709515616,4.37221254944776,22.8073121472927,3.2465467351592,15.8917888331681,11.2968661695524,3.01389531207506,1.77702496037333,1.83022538565218,0,0,0,3.81868247206045,16.7658076598002,17.6887936400358,17.6048705539536,17.3543285692009,14.4119292072477,11.5983337890946,11.2408699786457,4.97336289769656,5.05498395837992,6.21339313086926,1.69107881605257,54.2745062139643,42.6882905379312,63.0021850234714,57.7344410945458,56.4313459139199,59.3827627547515,31.249052362548,19.8184160964594,7.00593950395418,5.76060012515731,2.21207784439725,8.31173382689673,5.23825881540619,2.46849563657811,4.833720783022,2.58285761215644,1.80293174279953,2.36303243479324,2.42319479875554,1.295515713135,0.907435666231565,1.46186821109629,0.962118416403295,1.75315353272353,31.7422537061296,0.221985953374065,0,0.335769232728157,13.1368923941889,60.2460746198294,45.604754442549,15.2201549146137,12.0377304968487,75.1119950680698,67.2074845300478,89.9445956099853,59.6330542732596,68.5082519770642,71.0070263546318,71.5523850245714,79.706852970687,68.8776461655991,75.5930055157657,21.3801936023404,24.7395421508639,21.1709671135126,16.2881500435757,15.3017608718427,13.420576116851,20.4466989577486,20.6035057238894,17.329637317958,23.2481434822694,15.2087579934144,21.6920292593988,17.0427543595186,19.2715708738657,17.8049953762401,26.6724467118521,19.3526824327909,19.6767404872979,21.0163809409686,22.963031540966,16.8005933668854,20.0547660960051,19.7902037656276,16.7148379127178,18.8218760830661,16.9229215783353,16.6464455314223,19.9932980692761,16.5681018891951,21.8845485946518,20.1679530811096,16.1547351095924,17.187703813127,18.5924209423159,16.2041553224159,21.9833308585392,13.8019648982791,15.4707158914775,16.6420848899894,13.2354851471709,21.5637087126992|short_description=p1@Pknox2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:208076 | |||
|HGNC= | |||
|MCL_coexpression_id=817 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG99,uniprot:Q8BJF5 | |||
|association_with_transcript=0bp_to_ENSMUST00000039674,ENSMUST00000080754,NM_001029838,NM_148950,uc009oue.1,uc009ouf.1,uc009oug.1,uc009ouh.1_5end | |||
|cluster_id=chr9:36954842..36954908,- | |||
|description=CAGE_peak_1_at_Pknox2_5end | |||
|id=chr9:36954842..36954908,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.62e-17!52;UBERON:0005068!1.62e-17!52;UBERON:0006241!1.62e-17!52;UBERON:0007135!1.62e-17!52;UBERON:0000033!4.30e-16!63;UBERON:0002346!5.33e-16!71;UBERON:0003075!5.33e-16!71;UBERON:0007284!5.33e-16!71;UBERON:0001017!5.49e-16!73;UBERON:0005743!5.49e-16!73;UBERON:0000073!6.24e-15!75;UBERON:0001016!6.24e-15!75;UBERON:0000955!6.86e-15!50;UBERON:0006238!6.86e-15!50;UBERON:0003056!7.54e-15!49;UBERON:0002616!2.28e-14!49;UBERON:0003080!1.16e-13!40;UBERON:0002780!2.82e-13!39;UBERON:0001890!2.82e-13!39;UBERON:0006240!2.82e-13!39;UBERON:0004121!2.62e-12!102;UBERON:0000924!2.62e-12!102;UBERON:0006601!2.62e-12!102;UBERON:0002020!4.52e-12!34;UBERON:0004111!3.45e-11!122;UBERON:0000025!1.78e-10!114;UBERON:0000468!6.25e-10!333;UBERON:0002791!1.04e-09!29;UBERON:0003528!1.04e-09!29;UBERON:0001893!1.04e-09!29;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0000956!4.52e-08!21;UBERON:0001869!4.52e-08!21;UBERON:0000203!4.52e-08!21;UBERON:0002619!6.03e-08!17;UBERON:0000922!3.55e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-18,64;UBERON:0003075,1.04e-18,64;UBERON:0007284,1.04e-18,64;UBERON:0001049,1.38e-17,52;UBERON:0005068,1.38e-17,52;UBERON:0006241,1.38e-17,52;UBERON:0007135,1.38e-17,52;UBERON:0000073,6.29e-17,54;UBERON:0001017,4.75e-16,73;UBERON:0010371,2.17e-15,73;UBERON:0000955,3.10e-15,47;UBERON:0006238,3.10e-15,47;UBERON:0001016,5.45e-15,75;UBERON:0003056,6.60e-15,49;UBERON:0010314,8.21e-15,92;UBERON:0002616,1.05e-14,46;UBERON:0004121,6.51e-14,95;UBERON:0000924,6.51e-14,95;UBERON:0006601,6.51e-14,95;UBERON:0003080,1.03e-13,40;UBERON:0002780,2.51e-13,39;UBERON:0001890,2.51e-13,39;UBERON:0006240,2.51e-13,39;UBERON:0002020,4.07e-12,34;UBERON:0004111,4.29e-11,122;UBERON:0000025,2.21e-10,114;UBERON:0003528,9.54e-10,29;UBERON:0002791,9.54e-10,29;UBERON:0001893,9.54e-10,29;UBERON:0002021,3.28e-08,10;UBERON:0000411,3.28e-08,10;UBERON:0001950,3.28e-08,10;UBERON:0000956,4.23e-08,21;UBERON:0001869,4.23e-08,21;UBERON:0000203,4.23e-08,21;UBERON:0002619,5.65e-08,17;UBERON:0000922,4.08e-07,320 | |||
|phase1_expression=17.2960754873177,0,0,0,0,0,0.233612640595526,0.258246646883153,0.985521055061667,1.17032263160997,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,0,0,0,0,21.4309091180696,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,4.60384793810598,2.3440060335714,5.23523743973798,3.52938892818609,3.41522742479223,5.34061388334269,8.18329316841252,11.6583470902442,28.816840089384,17.9950009200049,7.19483016055474,5.93152693383074,7.19390626574849,8.9591309840232,10.062679505548,0,0,0.672187598284928,15.6928255981928,28.0802771139982,11.8604581223812,26.9080892943265,17.4567023159771,17.1134478946668,10.8430250262122,10.6715375533337,0,0,0,10.1864037576258,14.2160772968975,12.6501327016343,13.9056116481641,12.6194976810829,23.7090317055157,28.7129103237098,18.618601480673,20.8943126819755,18.3843757322004,7.70811166995721,13.2794831608595,17.664751324468,24.3989632300859,24.1527379110361,22.9201883044974,9.77140496504833,17.4456409109821,19.0997809721013,35.6500588423138,39.8640706237488,45.6678642271986,1.74170244666323,3.09843396437821,17.971598299504,0.860423876981386,0,0,0,0.448026887097336,11.5164424508037,0.170430322578058,0.259786004602869,0,5.49289337129054,2.56652954828636,7.64415719119937,0,0,0.253359865475099,0,4.68153906848146,13.9826457169473,4.60170631100957,8.50078101154066,6.39377504455497,5.30415643688935,6.48107354376277,9.05433044944927,2.63899841792318,4.44950941921873,9.39895819979426,3.5384422077995,16.8237523945306,12.367125033782,10.6672555689749,1.86391761218122,42.7459963636859,25.761944938055,3.0654846625031,0,0,0,25.1648274200102,26.5350349634803,21.6125485634127,64.3149984711423,54.7231078686907,19.5320761885986,30.6635987198062,24.2377685963753,8.33526703087623,2.77995034277042,11.1534183619831,27.0650521362424,11.9549094305406,18.1862751103403,21.2493793148358,22.7922272156948,21.0106501267154,17.9907311154679,12.6764651662118,26.5148631307396,23.4491539408096,15.1317966780996,7.01426343768239,11.9560317167007,17.7608604926305,9.05441400194951,27.0686602873151,0,0,0.284163499395593,10.9776659443816,9.38104239924385,10.6236616261999,11.3637473080901,8.65762619688577,6.78775296704464,7.20855228726264,6.70683503499048,6.30532848782715,9.37991144506839,13.1333971263276,9.64718833595683,10.3801991071986,13.6121071480451,10.3338942445486,31.1229123874908,26.755199218614,0.660837565967596,2.64450566663544,26.2344548158338,23.9203772016252,12.371276286921,11.0925938542838,10.0070119730192,7.03834816616469,1.42358718463353,6.58795818896044,6.53471542880701,5.17286827306992,6.04388670069272,0.898819408654221,4.75503709724327,3.38540164532424,9.67306294860717,14.1668155636064,18.0332377076929,15.4775009162439,13.3827216145662,11.8529535614638,16.6944458008039,9.15182917473533,3.92496819603437,4.31890073726302,2.07516838961004,3.83743743147016,2.55526693647164,1.12431056192427,1.21716072833102,0.72353147925725,1.2731292589071,2.87696137450811,1.45921704097532,2.47105271869273,7.18841032636773,4.46569137202204,3.74445207737473,1.51547326768267,1.07638448113147,2.8946611281802,25.6806934331581,8.33762211790133,14.6668478797823,16.8047634917436,20.8874320976767,22.2783322397615,19.9956658344252,39.4169968672754,35.7831777121054,29.4548037232871,33.3260466494148,44.7346849173965,33.8462564457155,42.8161213401274,0,0,2.45882136509518,4.96686143348518,21.0321272884007,15.9407893765396,1.47541450839008,28.5292147740941,10.4117712407365,8.58965237452605,20.0343759891503,9.08081432219698,5.56996685205985,7.64306633129848,7.69140333182299,5.55286130031493,7.90575555893047,36.9519513885078,44.7111268406046,22.4362660620742,18.2433394476005,62.6886467295635,2.65490276679926,7.76898035695941,5.13950046840077,2.82907619633847,4.42952839321159,7.37844355065426,7.23599220871019,5.08947221268508,6.06045543254026,6.0046984007805,5.27093042874994,3.09406629744561,20.7668159509811,31.5106914554793,29.7524972700335,45.225114391666,42.7389963077879,27.2904290931168,22.7077648430927,13.700922710157,38.4861601224485,9.74427525973573,26.4634077665954,15.4993077764991,4.35953952078945,5.06628569396509,2.02932984805332,3.11867709515616,4.37221254944776,22.8073121472927,3.2465467351592,15.8917888331681,11.2968661695524,3.01389531207506,1.77702496037333,1.83022538565218,0,0,0,3.81868247206045,16.7658076598002,17.6887936400358,17.6048705539536,17.3543285692009,14.4119292072477,11.5983337890946,11.2408699786457,4.97336289769656,5.05498395837992,6.21339313086926,1.69107881605257,54.2745062139643,42.6882905379312,63.0021850234714,57.7344410945458,56.4313459139199,59.3827627547515,31.249052362548,19.8184160964594,7.00593950395418,5.76060012515731,2.21207784439725,8.31173382689673,5.23825881540619,2.46849563657811,4.833720783022,2.58285761215644,1.80293174279953,2.36303243479324,2.42319479875554,1.295515713135,0.907435666231565,1.46186821109629,0.962118416403295,1.75315353272353,31.7422537061296,0.221985953374065,0,0.335769232728157,13.1368923941889,60.2460746198294,45.604754442549,15.2201549146137,12.0377304968487,75.1119950680698,67.2074845300478,89.9445956099853,59.6330542732596,68.5082519770642,71.0070263546318,71.5523850245714,79.706852970687,68.8776461655991,75.5930055157657,21.3801936023404,24.7395421508639,21.1709671135126,16.2881500435757,15.3017608718427,13.420576116851,20.4466989577486,20.6035057238894,17.329637317958,23.2481434822694,15.2087579934144,21.6920292593988,17.0427543595186,19.2715708738657,17.8049953762401,26.6724467118521,19.3526824327909,19.6767404872979,21.0163809409686,22.963031540966,16.8005933668854,20.0547660960051,19.7902037656276,16.7148379127178,18.8218760830661,16.9229215783353,16.6464455314223,19.9932980692761,16.5681018891951,21.8845485946518,20.1679530811096,16.1547351095924,17.187703813127,18.5924209423159,16.2041553224159,21.9833308585392,13.8019648982791,15.4707158914775,16.6420848899894,13.2354851471709,21.5637087126992 | |||
|short_description=p1@Pknox2 | |||
}} |
Revision as of 01:26, 5 August 2015
Short description: | p1@Pknox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pknox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:817 |
Association with transcript: | 0bp_to_ENSMUST00000039674, ENSMUST00000080754, NM_001029838, NM_148950, uc009oue.1, uc009ouf.1, uc009oug.1, uc009ouh.1_5end |
EntrezGene: | 208076 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data