FFCP PHASE1:Mm9::chr12:68323576..68323587,-: Difference between revisions
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{{FFCP|EntrezGene=320772|HGNC=|MCL_coexpression_id=1|UniProt=Q3UV20,P60755,B2RQF5|association_with_transcript=-40bp_to_NM_001193266,NM_207010,uc007nrl.2,uc007nrm.2,uc007nro.2,uc011ymi.1_5end|description=CAGE_peak_3_at_Mdga2_5end|id=chr12:68323576..68323587,-|ontology_enrichment_celltype=CL:0000540!8.40e-15!33;CL:0000047!8.40e-15!33;CL:0000031!8.40e-15!33;CL:0000404!8.40e-15!33;CL:0000117!3.20e-14!23;CL:0000337!3.20e-14!23;CL:0002319!1.46e-12!43;CL:0000221!5.00e-12!44;CL:0000133!5.00e-12!44;CL:0000393!5.45e-11!39;CL:0000211!5.45e-11!39;CL:0000055!2.53e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-12,23;CL:0000337,1.61e-12,23;CL:0002612,3.18e-08,3;CL:0000540,5.74e-08,33;CL:0000047,5.74e-08,33;CL:0000031,5.74e-08,33;CL:0000404,5.74e-08,33;CL:0002610,6.51e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.27e-31!73;UBERON:0005743!3.27e-31!73;UBERON:0000073!1.05e-30!75;UBERON:0001016!1.05e-30!75;UBERON:0002346!6.01e-29!71;UBERON:0003075!6.01e-29!71;UBERON:0007284!6.01e-29!71;UBERON:0004121!5.20e-28!102;UBERON:0000924!5.20e-28!102;UBERON:0006601!5.20e-28!102;UBERON:0000033!2.17e-26!63;UBERON:0001049!1.52e-25!52;UBERON:0005068!1.52e-25!52;UBERON:0006241!1.52e-25!52;UBERON:0007135!1.52e-25!52;UBERON:0002020!6.52e-24!34;UBERON:0000955!1.69e-23!50;UBERON:0006238!1.69e-23!50;UBERON:0003056!2.88e-23!49;UBERON:0002616!1.26e-22!49;UBERON:0002791!3.50e-19!29;UBERON:0003528!3.50e-19!29;UBERON:0001893!3.50e-19!29;UBERON:0003080!1.24e-18!40;UBERON:0002780!1.01e-17!39;UBERON:0001890!1.01e-17!39;UBERON:0006240!1.01e-17!39;UBERON:0000956!1.20e-15!21;UBERON:0001869!1.20e-15!21;UBERON:0000203!1.20e-15!21;UBERON:0007811!2.42e-14!86;UBERON:0002619!4.60e-14!17;UBERON:0000153!1.03e-13!94;UBERON:0002021!7.45e-11!10;UBERON:0000411!7.45e-11!10;UBERON:0001950!7.45e-11!10;UBERON:0003076!1.81e-07!12;UBERON:0003057!1.81e-07!12;UBERON:0002240!6.15e-07!6;UBERON:0005174!6.15e-07!6;UBERON:0001137!6.15e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-35,54;UBERON:0001017,1.65e-32,73;UBERON:0001049,1.20e-31,52;UBERON:0005068,1.20e-31,52;UBERON:0006241,1.20e-31,52;UBERON:0007135,1.20e-31,52;UBERON:0001016,1.87e-31,75;UBERON:0002020,8.45e-28,34;UBERON:0002346,1.82e-26,64;UBERON:0003075,1.82e-26,64;UBERON:0007284,1.82e-26,64;UBERON:0004121,5.57e-25,95;UBERON:0000924,5.57e-25,95;UBERON:0006601,5.57e-25,95;UBERON:0002021,9.69e-25,10;UBERON:0000411,9.69e-25,10;UBERON:0001950,9.69e-25,10;UBERON:0000955,1.43e-22,47;UBERON:0006238,1.43e-22,47;UBERON:0010371,2.14e-22,73;UBERON:0002616,5.60e-21,46;UBERON:0002619,2.58e-19,17;UBERON:0003528,2.23e-18,29;UBERON:0002791,2.23e-18,29;UBERON:0001893,2.23e-18,29;UBERON:0003080,4.94e-18,40;UBERON:0000956,1.15e-17,21;UBERON:0001869,1.15e-17,21;UBERON:0000203,1.15e-17,21;UBERON:0010314,2.04e-16,92;UBERON:0002780,2.09e-16,39;UBERON:0001890,2.09e-16,39;UBERON:0006240,2.09e-16,39;UBERON:0003056,1.65e-15,49;UBERON:0003076,2.00e-15,12;UBERON:0003057,2.00e-15,12;UBERON:0002240,5.60e-15,6;UBERON:0005174,5.60e-15,6;UBERON:0001137,5.60e-15,6;UBERON:0001948,1.04e-12,5;UBERON:0002315,1.04e-12,5;UBERON:0000025,5.91e-11,114;UBERON:0004111,8.06e-10,122;UBERON:0002257,3.18e-08,3;UBERON:0004684,6.51e-08,3;UBERON:0002275,6.51e-08,3;UBERON:0011216,9.94e-08,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.420649922702764,2.85650984403804,2.42955395046775,0.244981598429908,0.0958454710182364,0.919218786610021,2.20231761998777,2.042997409363,2.15049146558741,0.395658863190582,0.365950574409639,0,1.11673199600552,0.56276261003168,1.5279824777681,5.30331453852602,3.27454865837937,1.1183966749518,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,3.14560342750128,2.28750301409313,0.753926112677186,1.39059456153821,1.02286182932132,1.66230435647648,1.78465389374533,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.896796041993948,0.843315521037559,1.29351685369508,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.89260953707715,1.02904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,1.52375192569864,0,0,0.315508219416257,0.780877488593277,0,0,0.222798674082394,0,0.809621403349789,0.292255857911312,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.643011105094777,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,3.22227665555024,2.29158205375759,3.60891682921744,3.42541259885321,5.2877572817279,1.35004500046361,3.60256962579376,2.71885445390523,2.5888015587591,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.64183841918363,0,0.25347929989024,0,0,0.448176066834085,0.34461281373368,0,0.115884325944855,0.578727661391115,0,0,0,0.354951612318675,0.715308569841963,0.581385666529314,0.564656282491984,0.338458431566706,0,0,0.407412341537585,1.68342681497322,0.118635018124174,0.394017929502254,0.818462086339379,0,0.771626443924566,1.49886346762768,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0|short_description=p3@Mdga2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320772 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UV20,uniprot:P60755,uniprot:B2RQF5 | |||
|association_with_transcript=-40bp_to_NM_001193266,NM_207010,uc007nrl.2,uc007nrm.2,uc007nro.2,uc011ymi.1_5end | |||
|cluster_id=chr12:68323576..68323587,- | |||
|description=CAGE_peak_3_at_Mdga2_5end | |||
|id=chr12:68323576..68323587,- | |||
|ontology_enrichment_celltype=CL:0000540!8.40e-15!33;CL:0000047!8.40e-15!33;CL:0000031!8.40e-15!33;CL:0000404!8.40e-15!33;CL:0000117!3.20e-14!23;CL:0000337!3.20e-14!23;CL:0002319!1.46e-12!43;CL:0000221!5.00e-12!44;CL:0000133!5.00e-12!44;CL:0000393!5.45e-11!39;CL:0000211!5.45e-11!39;CL:0000055!2.53e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-12,23;CL:0000337,1.61e-12,23;CL:0002612,3.18e-08,3;CL:0000540,5.74e-08,33;CL:0000047,5.74e-08,33;CL:0000031,5.74e-08,33;CL:0000404,5.74e-08,33;CL:0002610,6.51e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.27e-31!73;UBERON:0005743!3.27e-31!73;UBERON:0000073!1.05e-30!75;UBERON:0001016!1.05e-30!75;UBERON:0002346!6.01e-29!71;UBERON:0003075!6.01e-29!71;UBERON:0007284!6.01e-29!71;UBERON:0004121!5.20e-28!102;UBERON:0000924!5.20e-28!102;UBERON:0006601!5.20e-28!102;UBERON:0000033!2.17e-26!63;UBERON:0001049!1.52e-25!52;UBERON:0005068!1.52e-25!52;UBERON:0006241!1.52e-25!52;UBERON:0007135!1.52e-25!52;UBERON:0002020!6.52e-24!34;UBERON:0000955!1.69e-23!50;UBERON:0006238!1.69e-23!50;UBERON:0003056!2.88e-23!49;UBERON:0002616!1.26e-22!49;UBERON:0002791!3.50e-19!29;UBERON:0003528!3.50e-19!29;UBERON:0001893!3.50e-19!29;UBERON:0003080!1.24e-18!40;UBERON:0002780!1.01e-17!39;UBERON:0001890!1.01e-17!39;UBERON:0006240!1.01e-17!39;UBERON:0000956!1.20e-15!21;UBERON:0001869!1.20e-15!21;UBERON:0000203!1.20e-15!21;UBERON:0007811!2.42e-14!86;UBERON:0002619!4.60e-14!17;UBERON:0000153!1.03e-13!94;UBERON:0002021!7.45e-11!10;UBERON:0000411!7.45e-11!10;UBERON:0001950!7.45e-11!10;UBERON:0003076!1.81e-07!12;UBERON:0003057!1.81e-07!12;UBERON:0002240!6.15e-07!6;UBERON:0005174!6.15e-07!6;UBERON:0001137!6.15e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-35,54;UBERON:0001017,1.65e-32,73;UBERON:0001049,1.20e-31,52;UBERON:0005068,1.20e-31,52;UBERON:0006241,1.20e-31,52;UBERON:0007135,1.20e-31,52;UBERON:0001016,1.87e-31,75;UBERON:0002020,8.45e-28,34;UBERON:0002346,1.82e-26,64;UBERON:0003075,1.82e-26,64;UBERON:0007284,1.82e-26,64;UBERON:0004121,5.57e-25,95;UBERON:0000924,5.57e-25,95;UBERON:0006601,5.57e-25,95;UBERON:0002021,9.69e-25,10;UBERON:0000411,9.69e-25,10;UBERON:0001950,9.69e-25,10;UBERON:0000955,1.43e-22,47;UBERON:0006238,1.43e-22,47;UBERON:0010371,2.14e-22,73;UBERON:0002616,5.60e-21,46;UBERON:0002619,2.58e-19,17;UBERON:0003528,2.23e-18,29;UBERON:0002791,2.23e-18,29;UBERON:0001893,2.23e-18,29;UBERON:0003080,4.94e-18,40;UBERON:0000956,1.15e-17,21;UBERON:0001869,1.15e-17,21;UBERON:0000203,1.15e-17,21;UBERON:0010314,2.04e-16,92;UBERON:0002780,2.09e-16,39;UBERON:0001890,2.09e-16,39;UBERON:0006240,2.09e-16,39;UBERON:0003056,1.65e-15,49;UBERON:0003076,2.00e-15,12;UBERON:0003057,2.00e-15,12;UBERON:0002240,5.60e-15,6;UBERON:0005174,5.60e-15,6;UBERON:0001137,5.60e-15,6;UBERON:0001948,1.04e-12,5;UBERON:0002315,1.04e-12,5;UBERON:0000025,5.91e-11,114;UBERON:0004111,8.06e-10,122;UBERON:0002257,3.18e-08,3;UBERON:0004684,6.51e-08,3;UBERON:0002275,6.51e-08,3;UBERON:0011216,9.94e-08,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.420649922702764,2.85650984403804,2.42955395046775,0.244981598429908,0.0958454710182364,0.919218786610021,2.20231761998777,2.042997409363,2.15049146558741,0.395658863190582,0.365950574409639,0,1.11673199600552,0.56276261003168,1.5279824777681,5.30331453852602,3.27454865837937,1.1183966749518,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,3.14560342750128,2.28750301409313,0.753926112677186,1.39059456153821,1.02286182932132,1.66230435647648,1.78465389374533,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.896796041993948,0.843315521037559,1.29351685369508,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.89260953707715,1.02904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,1.52375192569864,0,0,0.315508219416257,0.780877488593277,0,0,0.222798674082394,0,0.809621403349789,0.292255857911312,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.643011105094777,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,3.22227665555024,2.29158205375759,3.60891682921744,3.42541259885321,5.2877572817279,1.35004500046361,3.60256962579376,2.71885445390523,2.5888015587591,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.64183841918363,0,0.25347929989024,0,0,0.448176066834085,0.34461281373368,0,0.115884325944855,0.578727661391115,0,0,0,0.354951612318675,0.715308569841963,0.581385666529314,0.564656282491984,0.338458431566706,0,0,0.407412341537585,1.68342681497322,0.118635018124174,0.394017929502254,0.818462086339379,0,0.771626443924566,1.49886346762768,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0 | |||
|short_description=p3@Mdga2 | |||
}} |
Revision as of 03:57, 5 August 2015
Short description: | p3@Mdga2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mdga2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -40bp_to_NM_001193266, NM_207010, uc007nrl.2, uc007nrm.2, uc007nro.2, uc011ymi.1_5end |
EntrezGene: | 320772 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.61e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-12 | 23 |
neuron of the ventral spinal cord | 3.18e-08 | 3 |
neuron | 5.74e-08 | 33 |
neuronal stem cell | 5.74e-08 | 33 |
neuroblast | 5.74e-08 | 33 |
electrically signaling cell | 5.74e-08 | 33 |
raphe nuclei neuron | 6.51e-08 | 3 |