FFCP PHASE1:Mm9::chr17:74154285..74154296,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=57440|HGNC=|UniProt=Q9QXY6|association_with_transcript=104bp_to_ENSMUST00000024860,NM_020578,uc008dnn.2_5end|description=CAGE_peak_4_at_Ehd3_5end|id=chr17:74154285..74154296,+|ontology_enrichment_celltype=CL:0000055!9.23e-09!50;CL:0002319!1.33e-08!43;CL:0000221!1.48e-08!44;CL:0000133!1.48e-08!44;CL:0000540!4.50e-07!33;CL:0000047!4.50e-07!33;CL:0000031!4.50e-07!33;CL:0000404!4.50e-07!33|ontology_enrichment_celltype_v019_2=CL:0002610,8.91e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.17e-19!75;UBERON:0001016!1.17e-19!75;UBERON:0001017!3.35e-19!73;UBERON:0005743!3.35e-19!73;UBERON:0002346!5.55e-16!71;UBERON:0003075!5.55e-16!71;UBERON:0007284!5.55e-16!71;UBERON:0001049!7.34e-15!52;UBERON:0005068!7.34e-15!52;UBERON:0006241!7.34e-15!52;UBERON:0007135!7.34e-15!52;UBERON:0004121!8.23e-15!102;UBERON:0000924!8.23e-15!102;UBERON:0006601!8.23e-15!102;UBERON:0000955!1.39e-14!50;UBERON:0006238!1.39e-14!50;UBERON:0002616!6.23e-14!49;UBERON:0002020!3.79e-13!34;UBERON:0007811!3.19e-12!86;UBERON:0002791!6.67e-11!29;UBERON:0003528!6.67e-11!29;UBERON:0001893!6.67e-11!29;UBERON:0000153!7.65e-11!94;UBERON:0000033!2.92e-10!63;UBERON:0003080!2.24e-09!40;UBERON:0002619!2.96e-09!17;UBERON:0002780!8.74e-09!39;UBERON:0001890!8.74e-09!39;UBERON:0006240!8.74e-09!39;UBERON:0000475!8.82e-09!200;UBERON:0000477!1.21e-08!154;UBERON:0002021!1.95e-08!10;UBERON:0000411!1.95e-08!10;UBERON:0001950!1.95e-08!10;UBERON:0000956!3.63e-08!21;UBERON:0001869!3.63e-08!21;UBERON:0000203!3.63e-08!21;UBERON:0000025!1.18e-07!114;UBERON:0003056!3.77e-07!49;UBERON:0000119!5.51e-07!183;UBERON:0003076!6.82e-07!12;UBERON:0003057!6.82e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-23,73;UBERON:0000073,7.87e-23,54;UBERON:0001016,1.56e-22,75;UBERON:0001049,5.00e-20,52;UBERON:0005068,5.00e-20,52;UBERON:0006241,5.00e-20,52;UBERON:0007135,5.00e-20,52;UBERON:0000955,1.65e-19,47;UBERON:0006238,1.65e-19,47;UBERON:0002021,2.00e-18,10;UBERON:0000411,2.00e-18,10;UBERON:0001950,2.00e-18,10;UBERON:0002616,3.48e-18,46;UBERON:0002020,1.02e-17,34;UBERON:0003528,1.35e-17,29;UBERON:0002791,1.35e-17,29;UBERON:0001893,1.35e-17,29;UBERON:0002619,1.02e-16,17;UBERON:0003080,2.75e-16,40;UBERON:0002346,3.02e-16,64;UBERON:0003075,3.02e-16,64;UBERON:0007284,3.02e-16,64;UBERON:0004121,6.68e-16,95;UBERON:0000924,6.68e-16,95;UBERON:0006601,6.68e-16,95;UBERON:0000956,2.54e-15,21;UBERON:0001869,2.54e-15,21;UBERON:0000203,2.54e-15,21;UBERON:0002780,5.68e-15,39;UBERON:0001890,5.68e-15,39;UBERON:0006240,5.68e-15,39;UBERON:0010371,2.44e-13,73;UBERON:0010314,1.09e-12,92;UBERON:0003056,2.93e-12,49;UBERON:0011216,4.02e-08,194;UBERON:0002950,5.54e-08,4;UBERON:0001891,5.54e-08,4;UBERON:0009616,5.54e-08,4;UBERON:0010286,5.54e-08,4;UBERON:0000025,1.64e-07,114;UBERON:0004684,8.91e-07,3;UBERON:0002275,8.91e-07,3|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.703943610758334,2.57470978954193,0,0.239316476986009,3.0816131387617,2.53519167015092,0,0,0,0.315462165358238,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.436050312760893,1.31811709640683,0.58328969722285,0.699932108126813,0,0.335565212115473,2.17608642603403,4.03312558970957,0.514518872071894,0.85960031981627,1.03134418455488,1.01158230429799,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0,1.15265491596466,0.207379224616955,0,0,0.856952953211411,1.10434270475807,0,0.191690942036473,1.83843757322004,4.40463523997555,4.85211884723713,1.99688493233117,0.659431438650969,0.731901148819277,0,1.95428099300967,3.93933827022176,2.44477196442896,0.589257170947335,0.854230084794618,1.86399445825301,0.227178579999552,0.529000920747499,4.05810284182349,2.58127163094416,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,1.03575153458869,1.03909497345377,0.346970653532272,0.913396434936424,1.38369298353635,0.452167921657868,1.05829836422134,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0.878342391034642,0.628340120440365,0,0,0,0.127070227073065,3.44518470631092,3.20250421973039,0.628271760564322,4.51943232499919,4.34716277461562,2.28566849015516,2.27137768294861,0,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,6.51898840548794,0.411618449517138,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.49095073923223,0.0632365371242573,0.295220295959204,0.470996183524124,0.616985819609003,0,0.83422552858047,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0.648540907100142,0.823684239564244,0,0.372140947668503,0,0,0.358794827043824,0.964887042726734,0.369506380333209,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.714130922658041,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,0,0,0,0,0,0,2.40825884981688,2.81308047821288,0,0,0.94652465824877,0.780877488593277,1.93881057959519,0.716906393857656,0.445597348164788,0.283076530788832,0,0.292255857911312,1.97643888973262,3.21321316421807,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,1.58005560314089,0,0,0,0,0.198681354781265,0.841368146639782,0.738447635872886,0.504832249740738,0.685861259894999,0.504130925684203,1.36441033035653,0.384847366561318,1.98690733708667,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,2.82375921308533,3.68260189205742,3.43737308063638,2.40594455281163,3.42541259885321,3.7769694869485,3.37511250115903,2.2516060161211,3.17199686288943,5.69536342927002,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0,0.0640251524048693,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0.467863216890817,0,0,0.220591419119515,0.231867835620421|short_description=p4@Ehd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57440 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QXY6 | |||
|association_with_transcript=104bp_to_ENSMUST00000024860,NM_020578,uc008dnn.2_5end | |||
|cluster_id=chr17:74154285..74154296,+ | |||
|description=CAGE_peak_4_at_Ehd3_5end | |||
|id=chr17:74154285..74154296,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.23e-09!50;CL:0002319!1.33e-08!43;CL:0000221!1.48e-08!44;CL:0000133!1.48e-08!44;CL:0000540!4.50e-07!33;CL:0000047!4.50e-07!33;CL:0000031!4.50e-07!33;CL:0000404!4.50e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.91e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-19!75;UBERON:0001016!1.17e-19!75;UBERON:0001017!3.35e-19!73;UBERON:0005743!3.35e-19!73;UBERON:0002346!5.55e-16!71;UBERON:0003075!5.55e-16!71;UBERON:0007284!5.55e-16!71;UBERON:0001049!7.34e-15!52;UBERON:0005068!7.34e-15!52;UBERON:0006241!7.34e-15!52;UBERON:0007135!7.34e-15!52;UBERON:0004121!8.23e-15!102;UBERON:0000924!8.23e-15!102;UBERON:0006601!8.23e-15!102;UBERON:0000955!1.39e-14!50;UBERON:0006238!1.39e-14!50;UBERON:0002616!6.23e-14!49;UBERON:0002020!3.79e-13!34;UBERON:0007811!3.19e-12!86;UBERON:0002791!6.67e-11!29;UBERON:0003528!6.67e-11!29;UBERON:0001893!6.67e-11!29;UBERON:0000153!7.65e-11!94;UBERON:0000033!2.92e-10!63;UBERON:0003080!2.24e-09!40;UBERON:0002619!2.96e-09!17;UBERON:0002780!8.74e-09!39;UBERON:0001890!8.74e-09!39;UBERON:0006240!8.74e-09!39;UBERON:0000475!8.82e-09!200;UBERON:0000477!1.21e-08!154;UBERON:0002021!1.95e-08!10;UBERON:0000411!1.95e-08!10;UBERON:0001950!1.95e-08!10;UBERON:0000956!3.63e-08!21;UBERON:0001869!3.63e-08!21;UBERON:0000203!3.63e-08!21;UBERON:0000025!1.18e-07!114;UBERON:0003056!3.77e-07!49;UBERON:0000119!5.51e-07!183;UBERON:0003076!6.82e-07!12;UBERON:0003057!6.82e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-23,73;UBERON:0000073,7.87e-23,54;UBERON:0001016,1.56e-22,75;UBERON:0001049,5.00e-20,52;UBERON:0005068,5.00e-20,52;UBERON:0006241,5.00e-20,52;UBERON:0007135,5.00e-20,52;UBERON:0000955,1.65e-19,47;UBERON:0006238,1.65e-19,47;UBERON:0002021,2.00e-18,10;UBERON:0000411,2.00e-18,10;UBERON:0001950,2.00e-18,10;UBERON:0002616,3.48e-18,46;UBERON:0002020,1.02e-17,34;UBERON:0003528,1.35e-17,29;UBERON:0002791,1.35e-17,29;UBERON:0001893,1.35e-17,29;UBERON:0002619,1.02e-16,17;UBERON:0003080,2.75e-16,40;UBERON:0002346,3.02e-16,64;UBERON:0003075,3.02e-16,64;UBERON:0007284,3.02e-16,64;UBERON:0004121,6.68e-16,95;UBERON:0000924,6.68e-16,95;UBERON:0006601,6.68e-16,95;UBERON:0000956,2.54e-15,21;UBERON:0001869,2.54e-15,21;UBERON:0000203,2.54e-15,21;UBERON:0002780,5.68e-15,39;UBERON:0001890,5.68e-15,39;UBERON:0006240,5.68e-15,39;UBERON:0010371,2.44e-13,73;UBERON:0010314,1.09e-12,92;UBERON:0003056,2.93e-12,49;UBERON:0011216,4.02e-08,194;UBERON:0002950,5.54e-08,4;UBERON:0001891,5.54e-08,4;UBERON:0009616,5.54e-08,4;UBERON:0010286,5.54e-08,4;UBERON:0000025,1.64e-07,114;UBERON:0004684,8.91e-07,3;UBERON:0002275,8.91e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.703943610758334,2.57470978954193,0,0.239316476986009,3.0816131387617,2.53519167015092,0,0,0,0.315462165358238,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.436050312760893,1.31811709640683,0.58328969722285,0.699932108126813,0,0.335565212115473,2.17608642603403,4.03312558970957,0.514518872071894,0.85960031981627,1.03134418455488,1.01158230429799,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0,1.15265491596466,0.207379224616955,0,0,0.856952953211411,1.10434270475807,0,0.191690942036473,1.83843757322004,4.40463523997555,4.85211884723713,1.99688493233117,0.659431438650969,0.731901148819277,0,1.95428099300967,3.93933827022176,2.44477196442896,0.589257170947335,0.854230084794618,1.86399445825301,0.227178579999552,0.529000920747499,4.05810284182349,2.58127163094416,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.22836775943812,1.03575153458869,1.03909497345377,0.346970653532272,0.913396434936424,1.38369298353635,0.452167921657868,1.05829836422134,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0.878342391034642,0.628340120440365,0,0,0,0.127070227073065,3.44518470631092,3.20250421973039,0.628271760564322,4.51943232499919,4.34716277461562,2.28566849015516,2.27137768294861,0,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,6.51898840548794,0.411618449517138,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.49095073923223,0.0632365371242573,0.295220295959204,0.470996183524124,0.616985819609003,0,0.83422552858047,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0.648540907100142,0.823684239564244,0,0.372140947668503,0,0,0.358794827043824,0.964887042726734,0.369506380333209,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.714130922658041,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,0,0,0,0,0,0,2.40825884981688,2.81308047821288,0,0,0.94652465824877,0.780877488593277,1.93881057959519,0.716906393857656,0.445597348164788,0.283076530788832,0,0.292255857911312,1.97643888973262,3.21321316421807,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,1.58005560314089,0,0,0,0,0.198681354781265,0.841368146639782,0.738447635872886,0.504832249740738,0.685861259894999,0.504130925684203,1.36441033035653,0.384847366561318,1.98690733708667,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,2.82375921308533,3.68260189205742,3.43737308063638,2.40594455281163,3.42541259885321,3.7769694869485,3.37511250115903,2.2516060161211,3.17199686288943,5.69536342927002,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0,0.0640251524048693,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0.467863216890817,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Ehd3 | |||
}} |
Revision as of 07:54, 5 August 2015
Short description: | p4@Ehd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ehd3_5end |
Coexpression cluster: | NA |
Association with transcript: | 104bp_to_ENSMUST00000024860, NM_020578, uc008dnn.2_5end |
EntrezGene: | 57440 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.91e-07 | 3 |