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FFCP PHASE1:Mm9::chr12:82732215..82732299,+: Difference between revisions

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{{FFCP|EntrezGene=69480|HGNC=|MCL_coexpression_id=72|UniProt=Q3V038|association_with_transcript=-56bp_to_ENSMUST00000036116,NM_001033149,uc007ocm.1,uc007ocn.1_5end|description=CAGE_peak_1_at_Ttc9_5end|id=chr12:82732215..82732299,+|ontology_enrichment_celltype=CL:0000117!1.57e-09!23;CL:0000337!1.57e-09!23;CL:0000221!3.74e-07!44;CL:0000133!3.74e-07!44;CL:0002319!6.67e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-10,23;CL:0000337,2.71e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.40e-17!52;UBERON:0005068!1.40e-17!52;UBERON:0006241!1.40e-17!52;UBERON:0007135!1.40e-17!52;UBERON:0004121!4.89e-17!102;UBERON:0000924!4.89e-17!102;UBERON:0006601!4.89e-17!102;UBERON:0000073!4.91e-17!75;UBERON:0001016!4.91e-17!75;UBERON:0000033!2.71e-16!63;UBERON:0000955!5.91e-16!50;UBERON:0006238!5.91e-16!50;UBERON:0002616!6.14e-16!49;UBERON:0001017!9.34e-16!73;UBERON:0005743!9.34e-16!73;UBERON:0002020!2.33e-15!34;UBERON:0002346!9.27e-15!71;UBERON:0003075!9.27e-15!71;UBERON:0007284!9.27e-15!71;UBERON:0003056!1.15e-12!49;UBERON:0002791!1.56e-12!29;UBERON:0003528!1.56e-12!29;UBERON:0001893!1.56e-12!29;UBERON:0003080!3.68e-12!40;UBERON:0002780!1.22e-11!39;UBERON:0001890!1.22e-11!39;UBERON:0006240!1.22e-11!39;UBERON:0000956!3.02e-09!21;UBERON:0001869!3.02e-09!21;UBERON:0000203!3.02e-09!21;UBERON:0004111!1.52e-07!122;UBERON:0000025!2.12e-07!114;UBERON:0002619!2.39e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.06e-19,54;UBERON:0001049,1.29e-17,52;UBERON:0005068,1.29e-17,52;UBERON:0006241,1.29e-17,52;UBERON:0007135,1.29e-17,52;UBERON:0004121,1.77e-17,95;UBERON:0000924,1.77e-17,95;UBERON:0006601,1.77e-17,95;UBERON:0010371,5.35e-17,73;UBERON:0002020,1.12e-16,34;UBERON:0001016,2.67e-16,75;UBERON:0002346,3.04e-16,64;UBERON:0003075,3.04e-16,64;UBERON:0007284,3.04e-16,64;UBERON:0001017,5.67e-15,73;UBERON:0000955,5.39e-14,47;UBERON:0006238,5.39e-14,47;UBERON:0002616,5.82e-14,46;UBERON:0003528,1.40e-13,29;UBERON:0002791,1.40e-13,29;UBERON:0001893,1.40e-13,29;UBERON:0010314,1.94e-12,92;UBERON:0003056,1.95e-12,49;UBERON:0003080,3.39e-12,40;UBERON:0002780,1.22e-11,39;UBERON:0001890,1.22e-11,39;UBERON:0006240,1.22e-11,39;UBERON:0000956,5.58e-10,21;UBERON:0001869,5.58e-10,21;UBERON:0000203,5.58e-10,21;UBERON:0002619,6.65e-08,17;UBERON:0004111,1.09e-07,122;UBERON:0000025,2.18e-07,114|phase1_expression=1.60148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.63580021170738,2.0190142737785,0.782391344348039,2.61630187656536,2.63623419281366,2.13872888981712,1.81982348112971,1.43752564364972,0,0,0,1.80081605225163,2.0057340795713,2.06268836910977,2.42779753031517,2.11596391708813,3.1691570175309,2.71075625655306,0.889294796111139,0.449949858640699,0,0,6.89080254192331,11.1423308543251,8.08778976006126,7.83034442323806,7.99234853135252,8.85518051651791,12.589506834242,3.30725157880376,3.06705507258356,7.35375029288017,11.0115880999389,11.2364857514965,10.1380311949121,3.82470234417562,4.11694396210843,3.64639359389732,12.8424179540635,5.6276261003168,6.72312290217964,10.3120004915784,8.82704420954438,8.01517617048792,45.5871683865768,19.5730340676574,1.15945795480671,0,0,0,0,0,2.38755514223978,4.26075806445144,5.19572009205738,3.18005617059306,4.3661460130771,0,0,0,60.61749148314,62.3265269068743,79.8728623123358,0.5709193985953,0,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,1.65794904607885,0.587943535678524,1.0053327306374,0.741584903203122,0.578397427679647,2.65383165584962,7.27950824763341,1.32504911076236,2.90925151881133,0,8.49064311333487,10.4723353406728,0.255457055208591,0,0,0,9.13722900369418,13.7250180845588,15.2041766056566,8.16974304903699,10.2286182932132,9.76603809429932,9.73447578406546,1.73126918545538,1.36847667671102,0.252722758433675,0.841767423545896,1.04096354370163,1.60931473103431,3.06105620669094,2.71268672104287,4.150226448231,4.74020765053944,6.37171727006156,2.32833033665114,0.431135985865684,0.189106080167819,0.175951124163949,0.876782929710299,0.834141747676794,2.43776516565517,2.26360350048738,0,0,0,0,1.03562886267751,0,2.16074473753218,1.65721314909647,1.77087808572663,1.07986979021165,2.55787339225449,2.41446061259657,3.26942958628075,1.31647879930784,1.47750717671186,0.972825714550269,1.02339991197733,1.3173006917463,1.34206418760372,7.99101804543684,10.8049842998249,0,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,0.605050573870028,1.11189021922435,1.52180500890047,0.474529061544512,0.823494773620054,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,0.199141273254367,0,0.342745537829186,1.1270773567308,0.203651327845314,0.581857461502877,1.05203729835478,0.69560190836683,0.442830443938806,0,0.616985819609003,0,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0.179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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:69480
|HGNC=
|MCL_coexpression_id=72
|TSSclassifier=NA
|UniProt=uniprot:Q3V038
|association_with_transcript=-56bp_to_ENSMUST00000036116,NM_001033149,uc007ocm.1,uc007ocn.1_5end
|cluster_id=chr12:82732215..82732299,+
|description=CAGE_peak_1_at_Ttc9_5end
|id=chr12:82732215..82732299,+
|ontology_enrichment_celltype=CL:0000117!1.57e-09!23;CL:0000337!1.57e-09!23;CL:0000221!3.74e-07!44;CL:0000133!3.74e-07!44;CL:0002319!6.67e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-10,23;CL:0000337,2.71e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.40e-17!52;UBERON:0005068!1.40e-17!52;UBERON:0006241!1.40e-17!52;UBERON:0007135!1.40e-17!52;UBERON:0004121!4.89e-17!102;UBERON:0000924!4.89e-17!102;UBERON:0006601!4.89e-17!102;UBERON:0000073!4.91e-17!75;UBERON:0001016!4.91e-17!75;UBERON:0000033!2.71e-16!63;UBERON:0000955!5.91e-16!50;UBERON:0006238!5.91e-16!50;UBERON:0002616!6.14e-16!49;UBERON:0001017!9.34e-16!73;UBERON:0005743!9.34e-16!73;UBERON:0002020!2.33e-15!34;UBERON:0002346!9.27e-15!71;UBERON:0003075!9.27e-15!71;UBERON:0007284!9.27e-15!71;UBERON:0003056!1.15e-12!49;UBERON:0002791!1.56e-12!29;UBERON:0003528!1.56e-12!29;UBERON:0001893!1.56e-12!29;UBERON:0003080!3.68e-12!40;UBERON:0002780!1.22e-11!39;UBERON:0001890!1.22e-11!39;UBERON:0006240!1.22e-11!39;UBERON:0000956!3.02e-09!21;UBERON:0001869!3.02e-09!21;UBERON:0000203!3.02e-09!21;UBERON:0004111!1.52e-07!122;UBERON:0000025!2.12e-07!114;UBERON:0002619!2.39e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.06e-19,54;UBERON:0001049,1.29e-17,52;UBERON:0005068,1.29e-17,52;UBERON:0006241,1.29e-17,52;UBERON:0007135,1.29e-17,52;UBERON:0004121,1.77e-17,95;UBERON:0000924,1.77e-17,95;UBERON:0006601,1.77e-17,95;UBERON:0010371,5.35e-17,73;UBERON:0002020,1.12e-16,34;UBERON:0001016,2.67e-16,75;UBERON:0002346,3.04e-16,64;UBERON:0003075,3.04e-16,64;UBERON:0007284,3.04e-16,64;UBERON:0001017,5.67e-15,73;UBERON:0000955,5.39e-14,47;UBERON:0006238,5.39e-14,47;UBERON:0002616,5.82e-14,46;UBERON:0003528,1.40e-13,29;UBERON:0002791,1.40e-13,29;UBERON:0001893,1.40e-13,29;UBERON:0010314,1.94e-12,92;UBERON:0003056,1.95e-12,49;UBERON:0003080,3.39e-12,40;UBERON:0002780,1.22e-11,39;UBERON:0001890,1.22e-11,39;UBERON:0006240,1.22e-11,39;UBERON:0000956,5.58e-10,21;UBERON:0001869,5.58e-10,21;UBERON:0000203,5.58e-10,21;UBERON:0002619,6.65e-08,17;UBERON:0004111,1.09e-07,122;UBERON:0000025,2.18e-07,114
|phase1_expression=1.60148847104794,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.63580021170738,2.0190142737785,0.782391344348039,2.61630187656536,2.63623419281366,2.13872888981712,1.81982348112971,1.43752564364972,0,0,0,1.80081605225163,2.0057340795713,2.06268836910977,2.42779753031517,2.11596391708813,3.1691570175309,2.71075625655306,0.889294796111139,0.449949858640699,0,0,6.89080254192331,11.1423308543251,8.08778976006126,7.83034442323806,7.99234853135252,8.85518051651791,12.589506834242,3.30725157880376,3.06705507258356,7.35375029288017,11.0115880999389,11.2364857514965,10.1380311949121,3.82470234417562,4.11694396210843,3.64639359389732,12.8424179540635,5.6276261003168,6.72312290217964,10.3120004915784,8.82704420954438,8.01517617048792,45.5871683865768,19.5730340676574,1.15945795480671,0,0,0,0,0,2.38755514223978,4.26075806445144,5.19572009205738,3.18005617059306,4.3661460130771,0,0,0,60.61749148314,62.3265269068743,79.8728623123358,0.5709193985953,0,0.148442139064825,0.693941307064543,0.304465478312141,0.230615497256059,1.65794904607885,0.587943535678524,1.0053327306374,0.741584903203122,0.578397427679647,2.65383165584962,7.27950824763341,1.32504911076236,2.90925151881133,0,8.49064311333487,10.4723353406728,0.255457055208591,0,0,0,9.13722900369418,13.7250180845588,15.2041766056566,8.16974304903699,10.2286182932132,9.76603809429932,9.73447578406546,1.73126918545538,1.36847667671102,0.252722758433675,0.841767423545896,1.04096354370163,1.60931473103431,3.06105620669094,2.71268672104287,4.150226448231,4.74020765053944,6.37171727006156,2.32833033665114,0.431135985865684,0.189106080167819,0.175951124163949,0.876782929710299,0.834141747676794,2.43776516565517,2.26360350048738,0,0,0,0,1.03562886267751,0,2.16074473753218,1.65721314909647,1.77087808572663,1.07986979021165,2.55787339225449,2.41446061259657,3.26942958628075,1.31647879930784,1.47750717671186,0.972825714550269,1.02339991197733,1.3173006917463,1.34206418760372,7.99101804543684,10.8049842998249,0,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,0.605050573870028,1.11189021922435,1.52180500890047,0.474529061544512,0.823494773620054,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,0.199141273254367,0,0.342745537829186,1.1270773567308,0.203651327845314,0.581857461502877,1.05203729835478,0.69560190836683,0.442830443938806,0,0.616985819609003,0,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,5.35784251483154,1.51593129416388,2.44447464663039,1.69745085775188,0.938760993154008,2.1775813467436,2.85652369063216,8.78101415360095,1.57635144106191,2.6575762757853,2.71073106717728,3.60499292374624,2.76295970985433,5.49666422609744,0,0,0.491764273019036,0.275936746304732,11.7201930691088,14.5342491374332,0,2.7771801992481,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,2.57057053137446,2.83880170416537,1.6025904330053,1.95464351224291,2.96946221350564,0,0.728341908464944,0.906970670894253,6.03536255218874,10.335566250827,13.8345816574767,3.6179961043551,2.18120237686503,3.56497378384721,2.52829406348653,1.05418608574999,1.03135543248187,1.36175842301515,0.900305470156551,0.517434735131018,1.92903331528433,0.354680467284547,2.14042581122485,2.63278432963394,2.13125464380219,6.10146440965647,0.21183207086382,0.220528398054962,5.60613260001032,3.55221738730992,5.06628569396509,5.49112782414428,4.59594519286172,0.291480836629851,10.9400928186201,0,0.619160603889667,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,1.21991680276109,2.70013352054503,3.55450103224597,2.83871332870031,2.29269388854195,2.47960367176008,0.523511883968059,1.16653475962614,0,5.07323644815771,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.2604087696879,0.104859344425711,2.41584120826006,3.16833006883652,0,0.608175645870493,0.205421914329655,0.25984164595559,0.358053391334963,0,0.240390899039938,0,0.302899349844443,0,0.100826185136841,0.194915761479505,0,0,7.02864189207155,7.10355050797007,2.33256027184637,3.35769232728157,3.86379188064381,1.68914227906064,6.59345847362154,7.71726164684637,0,7.90652579663893,9.20650473014354,13.1765968091061,12.8889886757766,6.16574267793578,10.5755145634558,8.10027000278167,2.70192721934532,6.34399372577886,8.80192529978094,1.03787347584177,0.399024873401031,1.53660245178721,2.67417388775123,2.93458427679175,7.35374033800057,2.889207461421,2.88449080134452,2.56735367673452,3.28506375292937,3.54871019846336,4.14977951049368,3.46473577638565,6.33849008808206,4.99688579913835,3.81034953026459,5.79421629724277,5.01563973205633,4.12085900803307,3.67997300335993,3.08582327146874,4.2594193478241,4.76872379894642,3.63366041580821,3.85848459702856,5.58456412085065,4.024415403201,4.47218509444333,3.80251518768413,2.80571135828869,5.33857581558784,5.61475549540712,5.32000356120596,4.49316839439301,2.50778594275484,6.24526444844865,6.31615342802603,6.44613162144895,3.82576664137687,6.83833399270498,3.01428186306548
|short_description=p1@Ttc9
}}

Revision as of 08:26, 5 August 2015

Short description:p1@Ttc9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ttc9_5end
Coexpression cluster:MCL_coexpression_mm9:72
Association with transcript: -56bp_to_ENSMUST00000036116, NM_001033149, uc007ocm.1, uc007ocn.1_5end
EntrezGene:69480
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ttc9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D945.59
Mouse Schwann, donor2.CNhs12573.11746-123F919.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G160.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G262.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G379.87
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F115.20
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F29.77
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G86.37
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G110.80
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C211.72
medulla oblongata, neonate N30.CNhs11200.1396-42A314.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H35.07
skin, neonate N06.CNhs11097.693-20I55.49
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.71e-1023
neuroblast (sensu Vertebrata)2.71e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.06e-1954
neural tube1.29e-1752
neural rod1.29e-1752
future spinal cord1.29e-1752
neural keel1.29e-1752
ectoderm-derived structure1.77e-1795
ectoderm1.77e-1795
presumptive ectoderm1.77e-1795
ecto-epithelium5.35e-1773
gray matter1.12e-1634
nervous system2.67e-1675
neurectoderm3.04e-1664
neural plate3.04e-1664
presumptive neural plate3.04e-1664
central nervous system5.67e-1573
brain5.39e-1447
future brain5.39e-1447
regional part of brain5.82e-1446
brain grey matter1.40e-1329
regional part of telencephalon1.40e-1329
telencephalon1.40e-1329
structure with developmental contribution from neural crest1.94e-1292
pre-chordal neural plate1.95e-1249
anterior neural tube3.39e-1240
regional part of forebrain1.22e-1139
forebrain1.22e-1139
future forebrain1.22e-1139
cerebral cortex5.58e-1021
cerebral hemisphere5.58e-1021
pallium5.58e-1021
regional part of cerebral cortex6.65e-0817
anatomical conduit1.09e-07122
tube2.18e-07114
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