FFCP PHASE1:Mm9::chr9:58049281..58049326,-: Difference between revisions
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{{FFCP|EntrezGene=320563|HGNC=|MCL_coexpression_id=22|UniProt=E9Q9N7,Q5RKR3|association_with_transcript=195bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end|description=CAGE_peak_3_at_Islr2_5end|id=chr9:58049281..58049326,-|ontology_enrichment_celltype=CL:0000117!3.15e-14!23;CL:0000337!3.15e-14!23;CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000393!4.04e-08!39;CL:0000211!4.04e-08!39;CL:0000221!6.09e-08!44;CL:0000133!6.09e-08!44;CL:0002319!9.58e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.09e-17,23;CL:0000337,2.09e-17,23;CL:0000540,6.93e-10,33;CL:0000047,6.93e-10,33;CL:0000031,6.93e-10,33;CL:0000404,6.93e-10,33;CL:0002609,6.26e-08,6;CL:0000393,2.46e-07,39;CL:0000211,2.46e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.13e-25!49;UBERON:0000033!6.75e-24!63;UBERON:0002346!8.90e-24!71;UBERON:0003075!8.90e-24!71;UBERON:0007284!8.90e-24!71;UBERON:0003080!2.79e-21!40;UBERON:0002780!4.07e-21!39;UBERON:0001890!4.07e-21!39;UBERON:0006240!4.07e-21!39;UBERON:0001049!6.25e-21!52;UBERON:0005068!6.25e-21!52;UBERON:0006241!6.25e-21!52;UBERON:0007135!6.25e-21!52;UBERON:0000955!8.64e-21!50;UBERON:0006238!8.64e-21!50;UBERON:0002616!1.79e-20!49;UBERON:0001017!1.93e-20!73;UBERON:0005743!1.93e-20!73;UBERON:0000073!2.05e-20!75;UBERON:0001016!2.05e-20!75;UBERON:0002020!5.07e-20!34;UBERON:0004121!6.59e-20!102;UBERON:0000924!6.59e-20!102;UBERON:0006601!6.59e-20!102;UBERON:0002791!6.18e-18!29;UBERON:0003528!6.18e-18!29;UBERON:0001893!6.18e-18!29;UBERON:0000956!3.92e-13!21;UBERON:0001869!3.92e-13!21;UBERON:0000203!3.92e-13!21;UBERON:0007811!2.19e-12!86;UBERON:0000153!5.10e-11!94;UBERON:0002619!4.20e-10!17;UBERON:0002021!2.60e-08!10;UBERON:0000411!2.60e-08!10;UBERON:0001950!2.60e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.71e-29,49;UBERON:0002780,1.77e-27,39;UBERON:0001890,1.77e-27,39;UBERON:0006240,1.77e-27,39;UBERON:0003080,1.86e-26,40;UBERON:0002020,1.02e-25,34;UBERON:0000073,1.15e-25,54;UBERON:0002346,1.44e-24,64;UBERON:0003075,1.44e-24,64;UBERON:0007284,1.44e-24,64;UBERON:0001049,1.57e-23,52;UBERON:0005068,1.57e-23,52;UBERON:0006241,1.57e-23,52;UBERON:0007135,1.57e-23,52;UBERON:0003528,6.46e-23,29;UBERON:0002791,6.46e-23,29;UBERON:0001893,6.46e-23,29;UBERON:0000955,1.03e-21,47;UBERON:0006238,1.03e-21,47;UBERON:0002616,2.67e-21,46;UBERON:0001017,6.04e-20,73;UBERON:0010371,1.48e-19,73;UBERON:0001016,5.46e-19,75;UBERON:0000956,1.33e-17,21;UBERON:0001869,1.33e-17,21;UBERON:0000203,1.33e-17,21;UBERON:0004121,1.33e-17,95;UBERON:0000924,1.33e-17,95;UBERON:0006601,1.33e-17,95;UBERON:0010314,2.40e-14,92;UBERON:0002619,1.59e-13,17;UBERON:0002021,1.38e-10,10;UBERON:0000411,1.38e-10,10;UBERON:0001950,1.38e-10,10;UBERON:0000369,6.08e-07,5;UBERON:0002435,6.08e-07,5;UBERON:0000204,6.08e-07,5;UBERON:0010082,6.08e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,29.5382032855013,30.6814767977779,30.4239073682966,0,0,0,0,0,0,0,21.2563705232379,19.4408551197635,18.9292465216244,2.28520787523043,2.87129103237098,37.6046753589909,52.4274726469753,34.9303138911808,1.10115880999389,2.80912143787413,2.30409799884365,45.3688829791867,50.1352286941205,42.7148963856543,0.279182999001381,3.37657566019008,1.98637722109853,3.24091444021034,2.56269025438385,5.77838282058432,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,1.52232739156071,1.15307748628029,0.60289056221049,1.64624189989987,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,9.15001205637253,76.020883028283,11.9938780932671,13.0414883238469,1.45451631191692,6.65189178577806,0,0,0,0.210441855886474,0.260240885925407,4.82794419310293,6.66229880279792,5.42537344208574,7.27990540919208,7.17436833595159,4.96619140166563,0.258703370739016,0,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8231958851302,51.3494015772629,0,0.264450566663544,0,0.928946687441754,1.03093969057675,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0.780877488593277,0,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0.790575555893047,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,3.24109969256358,3.88076051348264,3.42939256050548,3.72414490648775,2.14042581122485,3.45552943264454,3.34911444026059,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.756037385752609,0.627264888043406,0.436725127492355,0.134864346384821,0,0,0.259229946583586,0,0,0.598066184175915,0.992750942742586,1.75006069509643,2.19571699912143,2.53434188236167,1.99507305697782,1.0416350787516,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,10.1271552031579,10.8850147553485,12.3734291287455,9.59115527678899,12.0863023582352,8.10027000278167,8.10578165803597,8.15656336171568,6.21312374102184,0.726511433089237,5.58634822761443,4.60980735536162,4.61902762429759,3.77303692730368,2.75765262675021,3.77819437262746,3.5025959730612,3.20919209591815,3.28506375292937,3.29523089857312,3.2066478035633,3.46473577638565,2.62503124859964,4.07791829584854,3.81034953026459,4.05595140806994,3.47236596834669,2.06042950401653,3.53277408322554,5.14303878578123,2.8396128985494,3.09967046931517,3.34296758254356,3.01150017329058,3.04612588410035,4.20734337607377,2.63069711437843,3.12349461845482,1.68342681497322,3.91495559809775,2.85662998889134,2.45538625901814,4.02835787083512,3.08650577569826,11.7410971630835,3.04111090979031,4.29742108096597,0,0,0|short_description=p3@Islr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320563 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q9N7,uniprot:Q5RKR3 | |||
|association_with_transcript=195bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end | |||
|cluster_id=chr9:58049281..58049326,- | |||
|description=CAGE_peak_3_at_Islr2_5end | |||
|id=chr9:58049281..58049326,- | |||
|ontology_enrichment_celltype=CL:0000117!3.15e-14!23;CL:0000337!3.15e-14!23;CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000393!4.04e-08!39;CL:0000211!4.04e-08!39;CL:0000221!6.09e-08!44;CL:0000133!6.09e-08!44;CL:0002319!9.58e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.09e-17,23;CL:0000337,2.09e-17,23;CL:0000540,6.93e-10,33;CL:0000047,6.93e-10,33;CL:0000031,6.93e-10,33;CL:0000404,6.93e-10,33;CL:0002609,6.26e-08,6;CL:0000393,2.46e-07,39;CL:0000211,2.46e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.13e-25!49;UBERON:0000033!6.75e-24!63;UBERON:0002346!8.90e-24!71;UBERON:0003075!8.90e-24!71;UBERON:0007284!8.90e-24!71;UBERON:0003080!2.79e-21!40;UBERON:0002780!4.07e-21!39;UBERON:0001890!4.07e-21!39;UBERON:0006240!4.07e-21!39;UBERON:0001049!6.25e-21!52;UBERON:0005068!6.25e-21!52;UBERON:0006241!6.25e-21!52;UBERON:0007135!6.25e-21!52;UBERON:0000955!8.64e-21!50;UBERON:0006238!8.64e-21!50;UBERON:0002616!1.79e-20!49;UBERON:0001017!1.93e-20!73;UBERON:0005743!1.93e-20!73;UBERON:0000073!2.05e-20!75;UBERON:0001016!2.05e-20!75;UBERON:0002020!5.07e-20!34;UBERON:0004121!6.59e-20!102;UBERON:0000924!6.59e-20!102;UBERON:0006601!6.59e-20!102;UBERON:0002791!6.18e-18!29;UBERON:0003528!6.18e-18!29;UBERON:0001893!6.18e-18!29;UBERON:0000956!3.92e-13!21;UBERON:0001869!3.92e-13!21;UBERON:0000203!3.92e-13!21;UBERON:0007811!2.19e-12!86;UBERON:0000153!5.10e-11!94;UBERON:0002619!4.20e-10!17;UBERON:0002021!2.60e-08!10;UBERON:0000411!2.60e-08!10;UBERON:0001950!2.60e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.71e-29,49;UBERON:0002780,1.77e-27,39;UBERON:0001890,1.77e-27,39;UBERON:0006240,1.77e-27,39;UBERON:0003080,1.86e-26,40;UBERON:0002020,1.02e-25,34;UBERON:0000073,1.15e-25,54;UBERON:0002346,1.44e-24,64;UBERON:0003075,1.44e-24,64;UBERON:0007284,1.44e-24,64;UBERON:0001049,1.57e-23,52;UBERON:0005068,1.57e-23,52;UBERON:0006241,1.57e-23,52;UBERON:0007135,1.57e-23,52;UBERON:0003528,6.46e-23,29;UBERON:0002791,6.46e-23,29;UBERON:0001893,6.46e-23,29;UBERON:0000955,1.03e-21,47;UBERON:0006238,1.03e-21,47;UBERON:0002616,2.67e-21,46;UBERON:0001017,6.04e-20,73;UBERON:0010371,1.48e-19,73;UBERON:0001016,5.46e-19,75;UBERON:0000956,1.33e-17,21;UBERON:0001869,1.33e-17,21;UBERON:0000203,1.33e-17,21;UBERON:0004121,1.33e-17,95;UBERON:0000924,1.33e-17,95;UBERON:0006601,1.33e-17,95;UBERON:0010314,2.40e-14,92;UBERON:0002619,1.59e-13,17;UBERON:0002021,1.38e-10,10;UBERON:0000411,1.38e-10,10;UBERON:0001950,1.38e-10,10;UBERON:0000369,6.08e-07,5;UBERON:0002435,6.08e-07,5;UBERON:0000204,6.08e-07,5;UBERON:0010082,6.08e-07,5 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,29.5382032855013,30.6814767977779,30.4239073682966,0,0,0,0,0,0,0,21.2563705232379,19.4408551197635,18.9292465216244,2.28520787523043,2.87129103237098,37.6046753589909,52.4274726469753,34.9303138911808,1.10115880999389,2.80912143787413,2.30409799884365,45.3688829791867,50.1352286941205,42.7148963856543,0.279182999001381,3.37657566019008,1.98637722109853,3.24091444021034,2.56269025438385,5.77838282058432,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,1.52232739156071,1.15307748628029,0.60289056221049,1.64624189989987,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,9.15001205637253,76.020883028283,11.9938780932671,13.0414883238469,1.45451631191692,6.65189178577806,0,0,0,0.210441855886474,0.260240885925407,4.82794419310293,6.66229880279792,5.42537344208574,7.27990540919208,7.17436833595159,4.96619140166563,0.258703370739016,0,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8231958851302,51.3494015772629,0,0.264450566663544,0,0.928946687441754,1.03093969057675,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0.780877488593277,0,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0.790575555893047,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,3.24109969256358,3.88076051348264,3.42939256050548,3.72414490648775,2.14042581122485,3.45552943264454,3.34911444026059,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.756037385752609,0.627264888043406,0.436725127492355,0.134864346384821,0,0,0.259229946583586,0,0,0.598066184175915,0.992750942742586,1.75006069509643,2.19571699912143,2.53434188236167,1.99507305697782,1.0416350787516,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,10.1271552031579,10.8850147553485,12.3734291287455,9.59115527678899,12.0863023582352,8.10027000278167,8.10578165803597,8.15656336171568,6.21312374102184,0.726511433089237,5.58634822761443,4.60980735536162,4.61902762429759,3.77303692730368,2.75765262675021,3.77819437262746,3.5025959730612,3.20919209591815,3.28506375292937,3.29523089857312,3.2066478035633,3.46473577638565,2.62503124859964,4.07791829584854,3.81034953026459,4.05595140806994,3.47236596834669,2.06042950401653,3.53277408322554,5.14303878578123,2.8396128985494,3.09967046931517,3.34296758254356,3.01150017329058,3.04612588410035,4.20734337607377,2.63069711437843,3.12349461845482,1.68342681497322,3.91495559809775,2.85662998889134,2.45538625901814,4.02835787083512,3.08650577569826,11.7410971630835,3.04111090979031,4.29742108096597,0,0,0 | |||
|short_description=p3@Islr2 | |||
}} |
Revision as of 09:35, 5 August 2015
Short description: | p3@Islr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Islr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 195bp_to_ENSMUST00000163200, NM_001161535, NM_001161537, uc009pwl.1, uc012guf.1_5end |
EntrezGene: | 320563 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.09e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-17 | 23 |
neuron | 6.93e-10 | 33 |
neuronal stem cell | 6.93e-10 | 33 |
neuroblast | 6.93e-10 | 33 |
electrically signaling cell | 6.93e-10 | 33 |
neuron of cerebral cortex | 6.26e-08 | 6 |
electrically responsive cell | 2.46e-07 | 39 |
electrically active cell | 2.46e-07 | 39 |