FFCP PHASE1:Mm9::chr2:70400911..70400928,+: Difference between revisions
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{{FFCP|EntrezGene=14415|HGNC=|MCL_coexpression_id=159|UniProt=D3Z1L8|association_with_transcript=-27bp_to_ENSMUST00000130998,uc008jzl.1_5end|description=CAGE_peak_12_at_Gad1_5end|id=chr2:70400911..70400928,+|ontology_enrichment_celltype=CL:0000117!6.57e-20!23;CL:0000337!6.57e-20!23;CL:0000540!6.62e-12!33;CL:0000047!6.62e-12!33;CL:0000031!6.62e-12!33;CL:0000404!6.62e-12!33;CL:0000393!3.86e-09!39;CL:0000211!3.86e-09!39;CL:0002319!9.43e-08!43;CL:0000221!1.90e-07!44;CL:0000133!1.90e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,6.19e-31,23;CL:0000337,6.19e-31,23;CL:0000540,8.16e-21,33;CL:0000047,8.16e-21,33;CL:0000031,8.16e-21,33;CL:0000404,8.16e-21,33;CL:0000393,3.15e-17,39;CL:0000211,3.15e-17,39;CL:0002319,2.16e-15,43;CL:0000221,5.52e-15,44;CL:0000133,5.52e-15,44;CL:0002612,3.78e-13,3;CL:0000120,2.53e-12,3;CL:0002611,1.66e-09,2;CL:0002321,1.77e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.78e-21!52;UBERON:0005068!2.78e-21!52;UBERON:0006241!2.78e-21!52;UBERON:0007135!2.78e-21!52;UBERON:0001017!5.96e-21!73;UBERON:0005743!5.96e-21!73;UBERON:0002020!7.59e-21!34;UBERON:0000073!4.77e-20!75;UBERON:0001016!4.77e-20!75;UBERON:0000955!1.57e-18!50;UBERON:0006238!1.57e-18!50;UBERON:0000033!4.28e-18!63;UBERON:0002346!6.72e-18!71;UBERON:0003075!6.72e-18!71;UBERON:0007284!6.72e-18!71;UBERON:0002616!2.08e-17!49;UBERON:0004121!1.11e-15!102;UBERON:0000924!1.11e-15!102;UBERON:0006601!1.11e-15!102;UBERON:0003056!1.40e-15!49;UBERON:0002791!9.96e-15!29;UBERON:0003528!9.96e-15!29;UBERON:0001893!9.96e-15!29;UBERON:0003080!4.01e-14!40;UBERON:0002780!3.58e-13!39;UBERON:0001890!3.58e-13!39;UBERON:0006240!3.58e-13!39;UBERON:0007811!2.28e-10!86;UBERON:0000956!5.42e-10!21;UBERON:0001869!5.42e-10!21;UBERON:0000203!5.42e-10!21;UBERON:0002240!2.27e-09!6;UBERON:0005174!2.27e-09!6;UBERON:0001137!2.27e-09!6;UBERON:0002619!1.17e-08!17;UBERON:0000153!1.25e-08!94;UBERON:0001948!2.48e-08!5;UBERON:0002315!2.48e-08!5;UBERON:0003076!3.89e-08!12;UBERON:0003057!3.89e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0000073,6.73e-23,54;UBERON:0001948,5.40e-21,5;UBERON:0002315,5.40e-21,5;UBERON:0002020,3.07e-20,34;UBERON:0001049,5.87e-19,52;UBERON:0005068,5.87e-19,52;UBERON:0006241,5.87e-19,52;UBERON:0007135,5.87e-19,52;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0002240,1.83e-17,6;UBERON:0005174,1.83e-17,6;UBERON:0001137,1.83e-17,6;UBERON:0002346,7.81e-15,64;UBERON:0003075,7.81e-15,64;UBERON:0007284,7.81e-15,64;UBERON:0002257,3.78e-13,3;UBERON:0000369,9.52e-13,5;UBERON:0002435,9.52e-13,5;UBERON:0000204,9.52e-13,5;UBERON:0010082,9.52e-13,5;UBERON:0010371,1.26e-12,73;UBERON:0002420,6.44e-12,8;UBERON:0007245,6.44e-12,8;UBERON:0010009,6.44e-12,8;UBERON:0010011,6.44e-12,8;UBERON:0000454,6.44e-12,8;UBERON:0003080,9.74e-12,40;UBERON:0000955,1.28e-11,47;UBERON:0006238,1.28e-11,47;UBERON:0002780,4.15e-10,39;UBERON:0001890,4.15e-10,39;UBERON:0006240,4.15e-10,39;UBERON:0002616,6.17e-10,46;UBERON:0002256,1.66e-09,2;UBERON:0010314,2.22e-09,92;UBERON:0003528,2.82e-09,29;UBERON:0002791,2.82e-09,29;UBERON:0001893,2.82e-09,29;UBERON:0003056,3.35e-09,49;UBERON:0003076,1.32e-08,12;UBERON:0003057,1.32e-08,12;UBERON:0011216,3.78e-07,194;UBERON:0000025,5.75e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,3.14216082844184,3.3130281142742,0.61245399607477,0.958454710182364,1.83843757322004,1.10115880999389,1.0214987046815,0.307213066512487,1.45074916503213,1.82975287204819,0,1.11673199600552,0,0.45839474333043,2.94628585473668,3.70166370077668,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83778682725382,0,0,0,0,1.3481157546434,2.74500361691176,1.88481528169297,0.695297280769106,0.767146371990992,2.90903262383384,2.43361894601636,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.859265911718438,0,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.448176066834085,0.17230640686684,0.952587382566147,0,0.77163688185482,0,0.735994600671987,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.543216455383447,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.999242311751784,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0|short_description=p12@Gad1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14415 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z1L8 | |||
|association_with_transcript=-27bp_to_ENSMUST00000130998,uc008jzl.1_5end | |||
|cluster_id=chr2:70400911..70400928,+ | |||
|description=CAGE_peak_12_at_Gad1_5end | |||
|id=chr2:70400911..70400928,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.57e-20!23;CL:0000337!6.57e-20!23;CL:0000540!6.62e-12!33;CL:0000047!6.62e-12!33;CL:0000031!6.62e-12!33;CL:0000404!6.62e-12!33;CL:0000393!3.86e-09!39;CL:0000211!3.86e-09!39;CL:0002319!9.43e-08!43;CL:0000221!1.90e-07!44;CL:0000133!1.90e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.19e-31,23;CL:0000337,6.19e-31,23;CL:0000540,8.16e-21,33;CL:0000047,8.16e-21,33;CL:0000031,8.16e-21,33;CL:0000404,8.16e-21,33;CL:0000393,3.15e-17,39;CL:0000211,3.15e-17,39;CL:0002319,2.16e-15,43;CL:0000221,5.52e-15,44;CL:0000133,5.52e-15,44;CL:0002612,3.78e-13,3;CL:0000120,2.53e-12,3;CL:0002611,1.66e-09,2;CL:0002321,1.77e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.78e-21!52;UBERON:0005068!2.78e-21!52;UBERON:0006241!2.78e-21!52;UBERON:0007135!2.78e-21!52;UBERON:0001017!5.96e-21!73;UBERON:0005743!5.96e-21!73;UBERON:0002020!7.59e-21!34;UBERON:0000073!4.77e-20!75;UBERON:0001016!4.77e-20!75;UBERON:0000955!1.57e-18!50;UBERON:0006238!1.57e-18!50;UBERON:0000033!4.28e-18!63;UBERON:0002346!6.72e-18!71;UBERON:0003075!6.72e-18!71;UBERON:0007284!6.72e-18!71;UBERON:0002616!2.08e-17!49;UBERON:0004121!1.11e-15!102;UBERON:0000924!1.11e-15!102;UBERON:0006601!1.11e-15!102;UBERON:0003056!1.40e-15!49;UBERON:0002791!9.96e-15!29;UBERON:0003528!9.96e-15!29;UBERON:0001893!9.96e-15!29;UBERON:0003080!4.01e-14!40;UBERON:0002780!3.58e-13!39;UBERON:0001890!3.58e-13!39;UBERON:0006240!3.58e-13!39;UBERON:0007811!2.28e-10!86;UBERON:0000956!5.42e-10!21;UBERON:0001869!5.42e-10!21;UBERON:0000203!5.42e-10!21;UBERON:0002240!2.27e-09!6;UBERON:0005174!2.27e-09!6;UBERON:0001137!2.27e-09!6;UBERON:0002619!1.17e-08!17;UBERON:0000153!1.25e-08!94;UBERON:0001948!2.48e-08!5;UBERON:0002315!2.48e-08!5;UBERON:0003076!3.89e-08!12;UBERON:0003057!3.89e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0000073,6.73e-23,54;UBERON:0001948,5.40e-21,5;UBERON:0002315,5.40e-21,5;UBERON:0002020,3.07e-20,34;UBERON:0001049,5.87e-19,52;UBERON:0005068,5.87e-19,52;UBERON:0006241,5.87e-19,52;UBERON:0007135,5.87e-19,52;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0002240,1.83e-17,6;UBERON:0005174,1.83e-17,6;UBERON:0001137,1.83e-17,6;UBERON:0002346,7.81e-15,64;UBERON:0003075,7.81e-15,64;UBERON:0007284,7.81e-15,64;UBERON:0002257,3.78e-13,3;UBERON:0000369,9.52e-13,5;UBERON:0002435,9.52e-13,5;UBERON:0000204,9.52e-13,5;UBERON:0010082,9.52e-13,5;UBERON:0010371,1.26e-12,73;UBERON:0002420,6.44e-12,8;UBERON:0007245,6.44e-12,8;UBERON:0010009,6.44e-12,8;UBERON:0010011,6.44e-12,8;UBERON:0000454,6.44e-12,8;UBERON:0003080,9.74e-12,40;UBERON:0000955,1.28e-11,47;UBERON:0006238,1.28e-11,47;UBERON:0002780,4.15e-10,39;UBERON:0001890,4.15e-10,39;UBERON:0006240,4.15e-10,39;UBERON:0002616,6.17e-10,46;UBERON:0002256,1.66e-09,2;UBERON:0010314,2.22e-09,92;UBERON:0003528,2.82e-09,29;UBERON:0002791,2.82e-09,29;UBERON:0001893,2.82e-09,29;UBERON:0003056,3.35e-09,49;UBERON:0003076,1.32e-08,12;UBERON:0003057,1.32e-08,12;UBERON:0011216,3.78e-07,194;UBERON:0000025,5.75e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,3.14216082844184,3.3130281142742,0.61245399607477,0.958454710182364,1.83843757322004,1.10115880999389,1.0214987046815,0.307213066512487,1.45074916503213,1.82975287204819,0,1.11673199600552,0,0.45839474333043,2.94628585473668,3.70166370077668,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83778682725382,0,0,0,0,1.3481157546434,2.74500361691176,1.88481528169297,0.695297280769106,0.767146371990992,2.90903262383384,2.43361894601636,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.859265911718438,0,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.448176066834085,0.17230640686684,0.952587382566147,0,0.77163688185482,0,0.735994600671987,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.543216455383447,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.999242311751784,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0 | |||
|short_description=p12@Gad1 | |||
}} |
Revision as of 09:51, 5 August 2015
Short description: | p12@Gad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Gad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | -27bp_to_ENSMUST00000130998, uc008jzl.1_5end |
EntrezGene: | 14415 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.19e-31 | 23 |
neuroblast (sensu Vertebrata) | 6.19e-31 | 23 |
neuron | 8.16e-21 | 33 |
neuronal stem cell | 8.16e-21 | 33 |
neuroblast | 8.16e-21 | 33 |
electrically signaling cell | 8.16e-21 | 33 |
electrically responsive cell | 3.15e-17 | 39 |
electrically active cell | 3.15e-17 | 39 |
neural cell | 2.16e-15 | 43 |
ectodermal cell | 5.52e-15 | 44 |
neurectodermal cell | 5.52e-15 | 44 |
neuron of the ventral spinal cord | 3.78e-13 | 3 |
granule cell | 2.53e-12 | 3 |
neuron of the dorsal spinal cord | 1.66e-09 | 2 |
embryonic cell | 1.77e-08 | 70 |