FFCP PHASE1:Mm9::chr9:58670746..58670773,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:58670746..58670773,+|id=chr9:58670746..58670773,+|ontology_enrichment_celltype=CL:0000117!8.86e-17!23;CL:0000337!8.86e-17!23;CL:0000540!4.43e-10!33;CL:0000047!4.43e-10!33;CL:0000031!4.43e-10!33;CL:0000404!4.43e-10!33;CL:0000393!1.45e-07!39;CL:0000211!1.45e-07!39;CL:0000221!5.52e-07!44;CL:0000133!5.52e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.24e-33,23;CL:0000337,9.24e-33,23;CL:0000540,1.27e-21,33;CL:0000047,1.27e-21,33;CL:0000031,1.27e-21,33;CL:0000404,1.27e-21,33;CL:0000393,1.10e-17,39;CL:0000211,1.10e-17,39;CL:0002319,1.14e-15,43;CL:0000221,3.19e-15,44;CL:0000133,3.19e-15,44;CL:0000120,8.49e-10,3;CL:0002613,1.10e-09,3;CL:0002610,2.09e-09,3;CL:0002612,8.23e-09,3;CL:0002321,3.96e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.43e-26!71;UBERON:0003075!3.43e-26!71;UBERON:0007284!3.43e-26!71;UBERON:0000033!1.33e-22!63;UBERON:0001049!9.31e-22!52;UBERON:0005068!9.31e-22!52;UBERON:0006241!9.31e-22!52;UBERON:0007135!9.31e-22!52;UBERON:0004121!3.73e-21!102;UBERON:0000924!3.73e-21!102;UBERON:0006601!3.73e-21!102;UBERON:0000955!3.19e-20!50;UBERON:0006238!3.19e-20!50;UBERON:0001017!1.13e-19!73;UBERON:0005743!1.13e-19!73;UBERON:0002616!1.48e-19!49;UBERON:0003056!1.77e-19!49;UBERON:0000073!3.61e-19!75;UBERON:0001016!3.61e-19!75;UBERON:0003080!1.46e-16!40;UBERON:0002780!7.71e-16!39;UBERON:0001890!7.71e-16!39;UBERON:0006240!7.71e-16!39;UBERON:0002020!9.16e-14!34;UBERON:0007811!2.81e-13!86;UBERON:0000025!3.33e-11!114;UBERON:0000153!5.87e-11!94;UBERON:0002791!3.93e-10!29;UBERON:0003528!3.93e-10!29;UBERON:0001893!3.93e-10!29;UBERON:0004111!3.99e-10!122;UBERON:0000483!5.03e-08!181;UBERON:0000119!1.18e-07!183;UBERON:0002420!4.10e-07!8;UBERON:0007245!4.10e-07!8;UBERON:0010009!4.10e-07!8;UBERON:0010011!4.10e-07!8;UBERON:0000454!4.10e-07!8;UBERON:0001894!4.18e-07!10;UBERON:0006222!4.18e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.48e-26,54;UBERON:0001017,5.15e-26,73;UBERON:0001016,3.67e-25,75;UBERON:0001049,2.33e-22,52;UBERON:0005068,2.33e-22,52;UBERON:0006241,2.33e-22,52;UBERON:0007135,2.33e-22,52;UBERON:0004121,3.98e-20,95;UBERON:0000924,3.98e-20,95;UBERON:0006601,3.98e-20,95;UBERON:0002346,6.51e-19,64;UBERON:0003075,6.51e-19,64;UBERON:0007284,6.51e-19,64;UBERON:0010371,6.18e-16,73;UBERON:0002240,9.20e-16,6;UBERON:0005174,9.20e-16,6;UBERON:0001137,9.20e-16,6;UBERON:0010314,4.20e-14,92;UBERON:0001948,9.85e-14,5;UBERON:0002315,9.85e-14,5;UBERON:0003076,3.64e-13,12;UBERON:0003057,3.64e-13,12;UBERON:0002616,4.68e-13,46;UBERON:0002020,6.83e-13,34;UBERON:0000955,1.07e-12,47;UBERON:0006238,1.07e-12,47;UBERON:0002420,3.31e-12,8;UBERON:0007245,3.31e-12,8;UBERON:0010009,3.31e-12,8;UBERON:0010011,3.31e-12,8;UBERON:0000454,3.31e-12,8;UBERON:0003080,8.33e-12,40;UBERON:0002780,1.68e-10,39;UBERON:0001890,1.68e-10,39;UBERON:0006240,1.68e-10,39;UBERON:0003056,2.18e-10,49;UBERON:0000369,2.05e-09,5;UBERON:0002435,2.05e-09,5;UBERON:0000204,2.05e-09,5;UBERON:0010082,2.05e-09,5;UBERON:0004684,2.09e-09,3;UBERON:0002275,2.09e-09,3;UBERON:0000025,2.52e-09,114;UBERON:0002257,8.23e-09,3;UBERON:0004111,2.31e-08,122|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,5.05791152148994,5.81890077199236,4.43681982454325,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,3.42781181284564,2.65042249141936,0.367472397644862,0.958454710182364,3.67687514644008,2.20231761998777,4.72443150915195,5.37622866396852,5.40733779693795,4.20843160571084,4.68822033501084,1.67509799400829,3.93933827022176,0.916789486660861,2.06240009831567,2.56269025438385,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0.904335843315735,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,1.9472783122627,0.457500602818626,1.63350657746724,0.347648640384553,0.511430914660661,2.70124457927428,2.10913641988085,0.101839363850316,0.124406970610093,0.758168275301024,0,0.650602214813519,1.37941262660084,0.540186389416048,0.150704817835715,0.748401490664606,0.512454881139399,0.468508622798644,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,2.48550927042602,0.938104239924385,1.2604344302271,0,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,0.233530684734339,0.329119699826961,0,0.405344047729279,0.730999937126662,0.439100230582101,0.939444931322602,0,0.823236899034275,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0.610953983535943,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,3.05046120976805,1.64096361229084,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,1.03486947026204,0.428674070063185,0.532020700926821,1.60531935841864,0.987294123612726,2.13125464380219,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0.201932899896295,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,0.103787347584177,1.19707462020309,0.853668028770671,0.486213434136588,0,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0.50695859978048,0,0.655490552289177,0.704276676453562,0.574354689556133,0,0.579421629724277,0.578727661391115,0,0.147198920134397,0,0,0,0.436039249896986,0.282328141245992,0.592302255241736,0.914639864363863,0.263069711437843,0.543216455383447,0,0.474540072496697,0.492522411877817,0.818462086339379,0.464810523557898,0.192906610981141,1.99848462350357,0,0.644613162144895,0.382576664137687,0,0|short_description=p@chr9:58670746..58670773,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:58670746..58670773,+ | |||
|description=CAGE_peak_at_chr9:58670746..58670773,+ | |||
|id=chr9:58670746..58670773,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.86e-17!23;CL:0000337!8.86e-17!23;CL:0000540!4.43e-10!33;CL:0000047!4.43e-10!33;CL:0000031!4.43e-10!33;CL:0000404!4.43e-10!33;CL:0000393!1.45e-07!39;CL:0000211!1.45e-07!39;CL:0000221!5.52e-07!44;CL:0000133!5.52e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.24e-33,23;CL:0000337,9.24e-33,23;CL:0000540,1.27e-21,33;CL:0000047,1.27e-21,33;CL:0000031,1.27e-21,33;CL:0000404,1.27e-21,33;CL:0000393,1.10e-17,39;CL:0000211,1.10e-17,39;CL:0002319,1.14e-15,43;CL:0000221,3.19e-15,44;CL:0000133,3.19e-15,44;CL:0000120,8.49e-10,3;CL:0002613,1.10e-09,3;CL:0002610,2.09e-09,3;CL:0002612,8.23e-09,3;CL:0002321,3.96e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.43e-26!71;UBERON:0003075!3.43e-26!71;UBERON:0007284!3.43e-26!71;UBERON:0000033!1.33e-22!63;UBERON:0001049!9.31e-22!52;UBERON:0005068!9.31e-22!52;UBERON:0006241!9.31e-22!52;UBERON:0007135!9.31e-22!52;UBERON:0004121!3.73e-21!102;UBERON:0000924!3.73e-21!102;UBERON:0006601!3.73e-21!102;UBERON:0000955!3.19e-20!50;UBERON:0006238!3.19e-20!50;UBERON:0001017!1.13e-19!73;UBERON:0005743!1.13e-19!73;UBERON:0002616!1.48e-19!49;UBERON:0003056!1.77e-19!49;UBERON:0000073!3.61e-19!75;UBERON:0001016!3.61e-19!75;UBERON:0003080!1.46e-16!40;UBERON:0002780!7.71e-16!39;UBERON:0001890!7.71e-16!39;UBERON:0006240!7.71e-16!39;UBERON:0002020!9.16e-14!34;UBERON:0007811!2.81e-13!86;UBERON:0000025!3.33e-11!114;UBERON:0000153!5.87e-11!94;UBERON:0002791!3.93e-10!29;UBERON:0003528!3.93e-10!29;UBERON:0001893!3.93e-10!29;UBERON:0004111!3.99e-10!122;UBERON:0000483!5.03e-08!181;UBERON:0000119!1.18e-07!183;UBERON:0002420!4.10e-07!8;UBERON:0007245!4.10e-07!8;UBERON:0010009!4.10e-07!8;UBERON:0010011!4.10e-07!8;UBERON:0000454!4.10e-07!8;UBERON:0001894!4.18e-07!10;UBERON:0006222!4.18e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.48e-26,54;UBERON:0001017,5.15e-26,73;UBERON:0001016,3.67e-25,75;UBERON:0001049,2.33e-22,52;UBERON:0005068,2.33e-22,52;UBERON:0006241,2.33e-22,52;UBERON:0007135,2.33e-22,52;UBERON:0004121,3.98e-20,95;UBERON:0000924,3.98e-20,95;UBERON:0006601,3.98e-20,95;UBERON:0002346,6.51e-19,64;UBERON:0003075,6.51e-19,64;UBERON:0007284,6.51e-19,64;UBERON:0010371,6.18e-16,73;UBERON:0002240,9.20e-16,6;UBERON:0005174,9.20e-16,6;UBERON:0001137,9.20e-16,6;UBERON:0010314,4.20e-14,92;UBERON:0001948,9.85e-14,5;UBERON:0002315,9.85e-14,5;UBERON:0003076,3.64e-13,12;UBERON:0003057,3.64e-13,12;UBERON:0002616,4.68e-13,46;UBERON:0002020,6.83e-13,34;UBERON:0000955,1.07e-12,47;UBERON:0006238,1.07e-12,47;UBERON:0002420,3.31e-12,8;UBERON:0007245,3.31e-12,8;UBERON:0010009,3.31e-12,8;UBERON:0010011,3.31e-12,8;UBERON:0000454,3.31e-12,8;UBERON:0003080,8.33e-12,40;UBERON:0002780,1.68e-10,39;UBERON:0001890,1.68e-10,39;UBERON:0006240,1.68e-10,39;UBERON:0003056,2.18e-10,49;UBERON:0000369,2.05e-09,5;UBERON:0002435,2.05e-09,5;UBERON:0000204,2.05e-09,5;UBERON:0010082,2.05e-09,5;UBERON:0004684,2.09e-09,3;UBERON:0002275,2.09e-09,3;UBERON:0000025,2.52e-09,114;UBERON:0002257,8.23e-09,3;UBERON:0004111,2.31e-08,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,5.05791152148994,5.81890077199236,4.43681982454325,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,3.42781181284564,2.65042249141936,0.367472397644862,0.958454710182364,3.67687514644008,2.20231761998777,4.72443150915195,5.37622866396852,5.40733779693795,4.20843160571084,4.68822033501084,1.67509799400829,3.93933827022176,0.916789486660861,2.06240009831567,2.56269025438385,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0.904335843315735,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,1.9472783122627,0.457500602818626,1.63350657746724,0.347648640384553,0.511430914660661,2.70124457927428,2.10913641988085,0.101839363850316,0.124406970610093,0.758168275301024,0,0.650602214813519,1.37941262660084,0.540186389416048,0.150704817835715,0.748401490664606,0.512454881139399,0.468508622798644,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,2.48550927042602,0.938104239924385,1.2604344302271,0,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,0.233530684734339,0.329119699826961,0,0.405344047729279,0.730999937126662,0.439100230582101,0.939444931322602,0,0.823236899034275,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0.610953983535943,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,3.05046120976805,1.64096361229084,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,1.03486947026204,0.428674070063185,0.532020700926821,1.60531935841864,0.987294123612726,2.13125464380219,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0.201932899896295,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,0.572895513439397,0.68741272937475,0.685082519770642,1.5107877947794,0,0,0.453142408984205,0.51776031175182,0.103787347584177,1.19707462020309,0.853668028770671,0.486213434136588,0,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0.50695859978048,0,0.655490552289177,0.704276676453562,0.574354689556133,0,0.579421629724277,0.578727661391115,0,0.147198920134397,0,0,0,0.436039249896986,0.282328141245992,0.592302255241736,0.914639864363863,0.263069711437843,0.543216455383447,0,0.474540072496697,0.492522411877817,0.818462086339379,0.464810523557898,0.192906610981141,1.99848462350357,0,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p@chr9:58670746..58670773,+ | |||
}} |
Latest revision as of 09:57, 5 August 2015
Short description: | p@chr9:58670746..58670773, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:58670746..58670773, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.24e-33 | 23 |
neuroblast (sensu Vertebrata) | 9.24e-33 | 23 |
neuron | 1.27e-21 | 33 |
neuronal stem cell | 1.27e-21 | 33 |
neuroblast | 1.27e-21 | 33 |
electrically signaling cell | 1.27e-21 | 33 |
electrically responsive cell | 1.10e-17 | 39 |
electrically active cell | 1.10e-17 | 39 |
neural cell | 1.14e-15 | 43 |
ectodermal cell | 3.19e-15 | 44 |
neurectodermal cell | 3.19e-15 | 44 |
granule cell | 8.49e-10 | 3 |
striatum neuron | 1.10e-09 | 3 |
raphe nuclei neuron | 2.09e-09 | 3 |
neuron of the ventral spinal cord | 8.23e-09 | 3 |
embryonic cell | 3.96e-08 | 70 |