FFCP PHASE1:Mm9::chr6:53989640..53989689,+: Difference between revisions
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{{FFCP|EntrezGene=69993|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=33bp_to_ENSMUST00000133315_5end|description=CAGE_peak_2_at_Chn2_5end|id=chr6:53989640..53989689,+|ontology_enrichment_celltype=CL:0000117!6.43e-10!23;CL:0000337!6.43e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-10,23;CL:0000337,1.49e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!8.34e-16!49;UBERON:0000955!2.10e-15!50;UBERON:0006238!2.10e-15!50;UBERON:0000033!4.06e-15!63;UBERON:0001049!6.23e-15!52;UBERON:0005068!6.23e-15!52;UBERON:0006241!6.23e-15!52;UBERON:0007135!6.23e-15!52;UBERON:0002616!9.62e-15!49;UBERON:0002780!1.35e-14!39;UBERON:0001890!1.35e-14!39;UBERON:0006240!1.35e-14!39;UBERON:0002020!1.41e-14!34;UBERON:0003080!2.31e-14!40;UBERON:0002791!2.54e-13!29;UBERON:0003528!2.54e-13!29;UBERON:0001893!2.54e-13!29;UBERON:0002346!3.45e-13!71;UBERON:0003075!3.45e-13!71;UBERON:0007284!3.45e-13!71;UBERON:0001017!1.22e-11!73;UBERON:0005743!1.22e-11!73;UBERON:0000073!1.32e-10!75;UBERON:0001016!1.32e-10!75;UBERON:0000956!1.06e-09!21;UBERON:0001869!1.06e-09!21;UBERON:0000203!1.06e-09!21;UBERON:0004121!4.23e-09!102;UBERON:0000924!4.23e-09!102;UBERON:0006601!4.23e-09!102;UBERON:0004111!3.49e-08!122;UBERON:0000025!9.19e-08!114;UBERON:0002021!1.54e-07!10;UBERON:0000411!1.54e-07!10;UBERON:0001950!1.54e-07!10;UBERON:0002619!1.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.56e-18,54;UBERON:0003056,1.07e-16,49;UBERON:0002346,1.48e-16,64;UBERON:0003075,1.48e-16,64;UBERON:0007284,1.48e-16,64;UBERON:0001049,1.77e-16,52;UBERON:0005068,1.77e-16,52;UBERON:0006241,1.77e-16,52;UBERON:0007135,1.77e-16,52;UBERON:0000955,6.07e-16,47;UBERON:0006238,6.07e-16,47;UBERON:0002780,1.01e-15,39;UBERON:0001890,1.01e-15,39;UBERON:0006240,1.01e-15,39;UBERON:0002020,1.04e-15,34;UBERON:0003080,1.81e-15,40;UBERON:0002616,3.12e-15,46;UBERON:0010371,8.74e-15,73;UBERON:0003528,2.31e-14,29;UBERON:0002791,2.31e-14,29;UBERON:0001893,2.31e-14,29;UBERON:0001017,3.55e-12,73;UBERON:0004121,3.03e-11,95;UBERON:0000924,3.03e-11,95;UBERON:0006601,3.03e-11,95;UBERON:0001016,3.59e-11,75;UBERON:0000956,1.83e-10,21;UBERON:0001869,1.83e-10,21;UBERON:0000203,1.83e-10,21;UBERON:0004111,3.26e-08,122;UBERON:0002619,4.45e-08,17;UBERON:0002021,5.41e-08,10;UBERON:0000411,5.41e-08,10;UBERON:0001950,5.41e-08,10;UBERON:0000025,1.04e-07,114;UBERON:0011216,7.87e-07,194;UBERON:0010314,8.16e-07,92|phase1_expression=0.640595388419176,2.79180326111489,1.81999695755814,3.32710632437513,6.51164448930251,2.01455126294268,2.10251376535973,0.387369970324729,0.703943610758334,0,0.171217968225505,0,1.36960583944965,0,0.666219523631325,0.202475267389826,0,0,0.137114433605739,0,2.97651515528744,0.0992909512008853,0,0.95995453676044,1.14704640533585,3.44539178469012,1.7230479846363,1.72376986148711,1.71021077510736,0.756090389279792,0.886922042621219,0,0,0,0.577703239502549,1.49611180822643,2.45003227514843,0,0,0,0,0,0,0.125896817975577,0.506884656097573,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0,0.725362142011344,0.336093799142464,1.54355661621568,1.14613375975503,0,5.66486090406874,1.5869729378161,4.43681982454325,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,2.68952813725088,10.9910989046986,8.91039192989158,10.9368979902719,1.71390590642282,2.87129103237098,9.92175473641128,13.1308295294984,10.1114066527102,3.30347642998166,2.80912143787413,2.76491759861238,11.3422207447967,9.69769022185542,5.2091337055676,5.862842979029,1.68828783009504,3.36156145108982,2.35702868378934,3.98640706237488,6.15118171223492,0.227178579999552,0.377857800533928,5.50742528533188,0.860423876981386,3.39985666853875,4.85732872474035,3.24888208723835,2.68816132258401,1.68533304158102,0,0,0,1.40843419776681,0,0,0,0,0,0,2.74041311325744,0.517875767294343,0.593768556259299,1.38788261412909,0.913396434936424,0.461230994512117,0.60289056221049,0.940709657085638,1.25666591329675,0,0.722996784599558,0,0.970601099684455,0.883366073841574,0,0,58.5561594023094,58.6450779077674,1.02182822083437,0.479260498023681,0.599902730993408,0.889491589511453,1.49790639404823,6.40500843946077,15.3298309577695,5.04090528557602,7.41574826257959,5.81806524766768,7.46309810111685,1.12023300235348,0.373220911830279,0.252722758433675,0.841767423545896,2.08192708740326,2.06911893990126,2.88099407688559,1.65775299619287,4.01415344992834,4.09963904911519,5.528401749024,2.32833033665114,1.29340795759705,1.70195472151037,2.99116911078713,0.657587197282725,1.94633074457919,1.39300866608867,2.26360350048738,1.99034266818493,0.702213187313235,0.257347907114715,0.568326998791185,0.621377317606506,1.64168241986767,1.80062061461015,1.42046841351126,0.983821158737019,1.07986979021165,0.232533944750408,0.804820204198858,0.700592054203017,0.329119699826961,0.656669856316381,0.324275238183423,0.292399974850665,0.219550115291051,0.671032093801859,1.89260953707715,10.1875566255492,4.62586296177317,2.11560453330835,1.06644125267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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69993 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENSMUST00000133315_5end | |||
|cluster_id=chr6:53989640..53989689,+ | |||
|description=CAGE_peak_2_at_Chn2_5end | |||
|id=chr6:53989640..53989689,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.43e-10!23;CL:0000337!6.43e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-10,23;CL:0000337,1.49e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!8.34e-16!49;UBERON:0000955!2.10e-15!50;UBERON:0006238!2.10e-15!50;UBERON:0000033!4.06e-15!63;UBERON:0001049!6.23e-15!52;UBERON:0005068!6.23e-15!52;UBERON:0006241!6.23e-15!52;UBERON:0007135!6.23e-15!52;UBERON:0002616!9.62e-15!49;UBERON:0002780!1.35e-14!39;UBERON:0001890!1.35e-14!39;UBERON:0006240!1.35e-14!39;UBERON:0002020!1.41e-14!34;UBERON:0003080!2.31e-14!40;UBERON:0002791!2.54e-13!29;UBERON:0003528!2.54e-13!29;UBERON:0001893!2.54e-13!29;UBERON:0002346!3.45e-13!71;UBERON:0003075!3.45e-13!71;UBERON:0007284!3.45e-13!71;UBERON:0001017!1.22e-11!73;UBERON:0005743!1.22e-11!73;UBERON:0000073!1.32e-10!75;UBERON:0001016!1.32e-10!75;UBERON:0000956!1.06e-09!21;UBERON:0001869!1.06e-09!21;UBERON:0000203!1.06e-09!21;UBERON:0004121!4.23e-09!102;UBERON:0000924!4.23e-09!102;UBERON:0006601!4.23e-09!102;UBERON:0004111!3.49e-08!122;UBERON:0000025!9.19e-08!114;UBERON:0002021!1.54e-07!10;UBERON:0000411!1.54e-07!10;UBERON:0001950!1.54e-07!10;UBERON:0002619!1.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.56e-18,54;UBERON:0003056,1.07e-16,49;UBERON:0002346,1.48e-16,64;UBERON:0003075,1.48e-16,64;UBERON:0007284,1.48e-16,64;UBERON:0001049,1.77e-16,52;UBERON:0005068,1.77e-16,52;UBERON:0006241,1.77e-16,52;UBERON:0007135,1.77e-16,52;UBERON:0000955,6.07e-16,47;UBERON:0006238,6.07e-16,47;UBERON:0002780,1.01e-15,39;UBERON:0001890,1.01e-15,39;UBERON:0006240,1.01e-15,39;UBERON:0002020,1.04e-15,34;UBERON:0003080,1.81e-15,40;UBERON:0002616,3.12e-15,46;UBERON:0010371,8.74e-15,73;UBERON:0003528,2.31e-14,29;UBERON:0002791,2.31e-14,29;UBERON:0001893,2.31e-14,29;UBERON:0001017,3.55e-12,73;UBERON:0004121,3.03e-11,95;UBERON:0000924,3.03e-11,95;UBERON:0006601,3.03e-11,95;UBERON:0001016,3.59e-11,75;UBERON:0000956,1.83e-10,21;UBERON:0001869,1.83e-10,21;UBERON:0000203,1.83e-10,21;UBERON:0004111,3.26e-08,122;UBERON:0002619,4.45e-08,17;UBERON:0002021,5.41e-08,10;UBERON:0000411,5.41e-08,10;UBERON:0001950,5.41e-08,10;UBERON:0000025,1.04e-07,114;UBERON:0011216,7.87e-07,194;UBERON:0010314,8.16e-07,92 | |||
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| |||
|short_description=p2@Chn2 | |||
}} |
Revision as of 23:15, 5 August 2015
Short description: | p2@Chn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 33bp_to_ENSMUST00000133315_5end |
EntrezGene: | 69993 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.49e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.49e-10 | 23 |