FFCP PHASE1:Mm9::chr13:54860735..54860764,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54860735..54860764,-|id=chr13:54860735..54860764,-|ontology_enrichment_celltype=CL:0000117!3.69e-15!23;CL:0000337!3.69e-15!23;CL:0002319!1.46e-11!43;CL:0000221!4.02e-11!44;CL:0000133!4.02e-11!44;CL:0000540!6.47e-11!33;CL:0000047!6.47e-11!33;CL:0000031!6.47e-11!33;CL:0000404!6.47e-11!33;CL:0000055!7.04e-09!50;CL:0000393!2.82e-08!39;CL:0000211!2.82e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-15,23;CL:0000337,3.30e-15,23;CL:0000540,9.93e-10,33;CL:0000047,9.93e-10,33;CL:0000031,9.93e-10,33;CL:0000404,9.93e-10,33;CL:0002610,2.03e-08,3;CL:0002612,3.97e-08,3;CL:0002319,5.70e-08,43;CL:0002614,6.17e-08,3;CL:0000393,8.34e-08,39;CL:0000211,8.34e-08,39;CL:0000221,1.01e-07,44;CL:0000133,1.01e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.02e-33!73;UBERON:0005743!1.02e-33!73;UBERON:0000073!2.29e-32!75;UBERON:0001016!2.29e-32!75;UBERON:0001049!2.75e-27!52;UBERON:0005068!2.75e-27!52;UBERON:0006241!2.75e-27!52;UBERON:0007135!2.75e-27!52;UBERON:0004121!5.58e-27!102;UBERON:0000924!5.58e-27!102;UBERON:0006601!5.58e-27!102;UBERON:0000955!3.99e-25!50;UBERON:0006238!3.99e-25!50;UBERON:0000033!6.82e-25!63;UBERON:0002346!1.40e-24!71;UBERON:0003075!1.40e-24!71;UBERON:0007284!1.40e-24!71;UBERON:0002616!4.18e-24!49;UBERON:0002020!1.26e-22!34;UBERON:0003056!1.85e-20!49;UBERON:0003080!3.48e-18!40;UBERON:0002780!3.04e-17!39;UBERON:0001890!3.04e-17!39;UBERON:0006240!3.04e-17!39;UBERON:0002791!3.54e-17!29;UBERON:0003528!3.54e-17!29;UBERON:0001893!3.54e-17!29;UBERON:0007811!1.39e-14!86;UBERON:0002021!2.30e-13!10;UBERON:0000411!2.30e-13!10;UBERON:0001950!2.30e-13!10;UBERON:0000153!3.08e-12!94;UBERON:0002619!4.55e-12!17;UBERON:0000956!5.17e-12!21;UBERON:0001869!5.17e-12!21;UBERON:0000203!5.17e-12!21;UBERON:0003076!7.96e-10!12;UBERON:0003057!7.96e-10!12;UBERON:0002240!3.65e-08!6;UBERON:0005174!3.65e-08!6;UBERON:0001137!3.65e-08!6;UBERON:0002298!8.83e-08!6;UBERON:0001948!4.72e-07!5;UBERON:0002315!4.72e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-35,54;UBERON:0001017,1.14e-32,73;UBERON:0001049,1.28e-31,52;UBERON:0005068,1.28e-31,52;UBERON:0006241,1.28e-31,52;UBERON:0007135,1.28e-31,52;UBERON:0001016,1.30e-31,75;UBERON:0002346,1.97e-26,64;UBERON:0003075,1.97e-26,64;UBERON:0007284,1.97e-26,64;UBERON:0002020,2.87e-25,34;UBERON:0004121,4.23e-25,95;UBERON:0000924,4.23e-25,95;UBERON:0006601,4.23e-25,95;UBERON:0002021,9.69e-25,10;UBERON:0000411,9.69e-25,10;UBERON:0001950,9.69e-25,10;UBERON:0000955,1.02e-22,47;UBERON:0006238,1.02e-22,47;UBERON:0010371,2.29e-22,73;UBERON:0002616,3.62e-21,46;UBERON:0003076,1.06e-18,12;UBERON:0003057,1.06e-18,12;UBERON:0003528,2.15e-16,29;UBERON:0002791,2.15e-16,29;UBERON:0001893,2.15e-16,29;UBERON:0010314,2.15e-16,92;UBERON:0003080,3.83e-16,40;UBERON:0002780,9.45e-15,39;UBERON:0001890,9.45e-15,39;UBERON:0006240,9.45e-15,39;UBERON:0002240,1.60e-14,6;UBERON:0005174,1.60e-14,6;UBERON:0001137,1.60e-14,6;UBERON:0003056,6.61e-14,49;UBERON:0002619,1.16e-13,17;UBERON:0000956,7.27e-13,21;UBERON:0001869,7.27e-13,21;UBERON:0000203,7.27e-13,21;UBERON:0001948,2.38e-12,5;UBERON:0002315,2.38e-12,5;UBERON:0000025,6.06e-11,114;UBERON:0002950,7.14e-10,4;UBERON:0001891,7.14e-10,4;UBERON:0009616,7.14e-10,4;UBERON:0010286,7.14e-10,4;UBERON:0004111,8.25e-10,122;UBERON:0004684,2.03e-08,3;UBERON:0002275,2.03e-08,3;UBERON:0002257,3.97e-08,3;UBERON:0002038,6.17e-08,3;UBERON:0009663,6.17e-08,3;UBERON:0009661,6.17e-08,3;UBERON:0000125,6.17e-08,3;UBERON:0002308,6.17e-08,3;UBERON:0011216,8.71e-08,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0,4.28476476605705,3.97563373712904,0.122490799214954,0.383381884072945,0,5.50579404996943,5.61824287574826,4.45458946443106,0.395658863190582,1.18933936683133,0,10.0505879640497,1.68828783009504,2.44477196442896,7.95497180778903,6.83384067835694,1.3047961207771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.75668478206928,23.0391377494801,0,0,0,0,2.09706895166752,0.915001205637253,0.125654352112864,2.60736480288415,1.02286182932132,3.32460871295296,1.94689515681309,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,6.90487854760765,4.01026859407578,6.8741272937475,4.11049511862385,5.2877572817279,5.40018000185445,9.00642406448441,5.43770890781046,8.80192529978094,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.749431733813838,0,0.429742108096597,1.14772999241306,0.441182838239031,0.231867835620421|short_description=p@chr13:54860735..54860764,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:54860735..54860764,- | |||
|description=CAGE_peak_at_chr13:54860735..54860764,- | |||
|id=chr13:54860735..54860764,- | |||
|ontology_enrichment_celltype=CL:0000117!3.69e-15!23;CL:0000337!3.69e-15!23;CL:0002319!1.46e-11!43;CL:0000221!4.02e-11!44;CL:0000133!4.02e-11!44;CL:0000540!6.47e-11!33;CL:0000047!6.47e-11!33;CL:0000031!6.47e-11!33;CL:0000404!6.47e-11!33;CL:0000055!7.04e-09!50;CL:0000393!2.82e-08!39;CL:0000211!2.82e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-15,23;CL:0000337,3.30e-15,23;CL:0000540,9.93e-10,33;CL:0000047,9.93e-10,33;CL:0000031,9.93e-10,33;CL:0000404,9.93e-10,33;CL:0002610,2.03e-08,3;CL:0002612,3.97e-08,3;CL:0002319,5.70e-08,43;CL:0002614,6.17e-08,3;CL:0000393,8.34e-08,39;CL:0000211,8.34e-08,39;CL:0000221,1.01e-07,44;CL:0000133,1.01e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-33!73;UBERON:0005743!1.02e-33!73;UBERON:0000073!2.29e-32!75;UBERON:0001016!2.29e-32!75;UBERON:0001049!2.75e-27!52;UBERON:0005068!2.75e-27!52;UBERON:0006241!2.75e-27!52;UBERON:0007135!2.75e-27!52;UBERON:0004121!5.58e-27!102;UBERON:0000924!5.58e-27!102;UBERON:0006601!5.58e-27!102;UBERON:0000955!3.99e-25!50;UBERON:0006238!3.99e-25!50;UBERON:0000033!6.82e-25!63;UBERON:0002346!1.40e-24!71;UBERON:0003075!1.40e-24!71;UBERON:0007284!1.40e-24!71;UBERON:0002616!4.18e-24!49;UBERON:0002020!1.26e-22!34;UBERON:0003056!1.85e-20!49;UBERON:0003080!3.48e-18!40;UBERON:0002780!3.04e-17!39;UBERON:0001890!3.04e-17!39;UBERON:0006240!3.04e-17!39;UBERON:0002791!3.54e-17!29;UBERON:0003528!3.54e-17!29;UBERON:0001893!3.54e-17!29;UBERON:0007811!1.39e-14!86;UBERON:0002021!2.30e-13!10;UBERON:0000411!2.30e-13!10;UBERON:0001950!2.30e-13!10;UBERON:0000153!3.08e-12!94;UBERON:0002619!4.55e-12!17;UBERON:0000956!5.17e-12!21;UBERON:0001869!5.17e-12!21;UBERON:0000203!5.17e-12!21;UBERON:0003076!7.96e-10!12;UBERON:0003057!7.96e-10!12;UBERON:0002240!3.65e-08!6;UBERON:0005174!3.65e-08!6;UBERON:0001137!3.65e-08!6;UBERON:0002298!8.83e-08!6;UBERON:0001948!4.72e-07!5;UBERON:0002315!4.72e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-35,54;UBERON:0001017,1.14e-32,73;UBERON:0001049,1.28e-31,52;UBERON:0005068,1.28e-31,52;UBERON:0006241,1.28e-31,52;UBERON:0007135,1.28e-31,52;UBERON:0001016,1.30e-31,75;UBERON:0002346,1.97e-26,64;UBERON:0003075,1.97e-26,64;UBERON:0007284,1.97e-26,64;UBERON:0002020,2.87e-25,34;UBERON:0004121,4.23e-25,95;UBERON:0000924,4.23e-25,95;UBERON:0006601,4.23e-25,95;UBERON:0002021,9.69e-25,10;UBERON:0000411,9.69e-25,10;UBERON:0001950,9.69e-25,10;UBERON:0000955,1.02e-22,47;UBERON:0006238,1.02e-22,47;UBERON:0010371,2.29e-22,73;UBERON:0002616,3.62e-21,46;UBERON:0003076,1.06e-18,12;UBERON:0003057,1.06e-18,12;UBERON:0003528,2.15e-16,29;UBERON:0002791,2.15e-16,29;UBERON:0001893,2.15e-16,29;UBERON:0010314,2.15e-16,92;UBERON:0003080,3.83e-16,40;UBERON:0002780,9.45e-15,39;UBERON:0001890,9.45e-15,39;UBERON:0006240,9.45e-15,39;UBERON:0002240,1.60e-14,6;UBERON:0005174,1.60e-14,6;UBERON:0001137,1.60e-14,6;UBERON:0003056,6.61e-14,49;UBERON:0002619,1.16e-13,17;UBERON:0000956,7.27e-13,21;UBERON:0001869,7.27e-13,21;UBERON:0000203,7.27e-13,21;UBERON:0001948,2.38e-12,5;UBERON:0002315,2.38e-12,5;UBERON:0000025,6.06e-11,114;UBERON:0002950,7.14e-10,4;UBERON:0001891,7.14e-10,4;UBERON:0009616,7.14e-10,4;UBERON:0010286,7.14e-10,4;UBERON:0004111,8.25e-10,122;UBERON:0004684,2.03e-08,3;UBERON:0002275,2.03e-08,3;UBERON:0002257,3.97e-08,3;UBERON:0002038,6.17e-08,3;UBERON:0009663,6.17e-08,3;UBERON:0009661,6.17e-08,3;UBERON:0000125,6.17e-08,3;UBERON:0002308,6.17e-08,3;UBERON:0011216,8.71e-08,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0,4.28476476605705,3.97563373712904,0.122490799214954,0.383381884072945,0,5.50579404996943,5.61824287574826,4.45458946443106,0.395658863190582,1.18933936683133,0,10.0505879640497,1.68828783009504,2.44477196442896,7.95497180778903,6.83384067835694,1.3047961207771,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.75668478206928,23.0391377494801,0,0,0,0,2.09706895166752,0.915001205637253,0.125654352112864,2.60736480288415,1.02286182932132,3.32460871295296,1.94689515681309,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,6.90487854760765,4.01026859407578,6.8741272937475,4.11049511862385,5.2877572817279,5.40018000185445,9.00642406448441,5.43770890781046,8.80192529978094,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0.749431733813838,0,0.429742108096597,1.14772999241306,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr13:54860735..54860764,- | |||
}} |
Latest revision as of 03:30, 6 August 2015
Short description: | p@chr13:54860735..54860764, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54860735..54860764, - |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.30e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.30e-15 | 23 |
neuron | 9.93e-10 | 33 |
neuronal stem cell | 9.93e-10 | 33 |
neuroblast | 9.93e-10 | 33 |
electrically signaling cell | 9.93e-10 | 33 |
raphe nuclei neuron | 2.03e-08 | 3 |
neuron of the ventral spinal cord | 3.97e-08 | 3 |
neural cell | 5.70e-08 | 43 |
neuron of the substantia nigra | 6.17e-08 | 3 |
electrically responsive cell | 8.34e-08 | 39 |
electrically active cell | 8.34e-08 | 39 |
ectodermal cell | 1.01e-07 | 44 |
neurectodermal cell | 1.01e-07 | 44 |