FFCP PHASE1:Mm9::chr5:135028009..135028103,-: Difference between revisions
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{{FFCP|EntrezGene=269713|HGNC=|UniProt=Q9Z0H8|association_with_transcript=200bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end|description=CAGE_peak_1_at_Clip2_5end|id=chr5:135028009..135028103,-|ontology_enrichment_celltype=CL:0002321!1.69e-11!70;CL:0000220!1.69e-11!70;CL:0000055!2.92e-10!50;CL:0000393!1.69e-09!39;CL:0000211!1.69e-09!39;CL:0000221!3.47e-08!44;CL:0000133!3.47e-08!44;CL:0002319!6.56e-08!43;CL:0000540!7.40e-07!33;CL:0000047!7.40e-07!33;CL:0000031!7.40e-07!33;CL:0000404!7.40e-07!33|ontology_enrichment_celltype_v019_2=CL:0002321,1.63e-11,70;CL:0000393,1.67e-09,39;CL:0000211,1.67e-09,39;CL:0000221,3.44e-08,44;CL:0000133,3.44e-08,44;CL:0002319,6.50e-08,43;CL:0000540,7.34e-07,33;CL:0000047,7.34e-07,33;CL:0000031,7.34e-07,33;CL:0000404,7.34e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.75e-19!73;UBERON:0005743!2.75e-19!73;UBERON:0000073!4.74e-19!75;UBERON:0001016!4.74e-19!75;UBERON:0001049!1.29e-14!52;UBERON:0005068!1.29e-14!52;UBERON:0006241!1.29e-14!52;UBERON:0007135!1.29e-14!52;UBERON:0000955!7.82e-14!50;UBERON:0006238!7.82e-14!50;UBERON:0004121!1.61e-13!102;UBERON:0000924!1.61e-13!102;UBERON:0006601!1.61e-13!102;UBERON:0002616!1.76e-13!49;UBERON:0002020!3.60e-12!34;UBERON:0000033!4.14e-11!63;UBERON:0003080!7.34e-11!40;UBERON:0002791!1.61e-10!29;UBERON:0003528!1.61e-10!29;UBERON:0001893!1.61e-10!29;UBERON:0002346!1.63e-10!71;UBERON:0003075!1.63e-10!71;UBERON:0007284!1.63e-10!71;UBERON:0002780!1.83e-10!39;UBERON:0001890!1.83e-10!39;UBERON:0006240!1.83e-10!39;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0003056!2.12e-08!49;UBERON:0002619!3.00e-08!17;UBERON:0000344!1.06e-07!15;UBERON:0001242!3.45e-07!13;UBERON:0000060!3.45e-07!13;UBERON:0001262!3.45e-07!13;UBERON:0004786!3.45e-07!13;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.68e-19,73;UBERON:0001016,4.62e-19,75;UBERON:0000073,3.01e-15,54;UBERON:0004121,4.09e-15,95;UBERON:0000924,4.09e-15,95;UBERON:0006601,4.09e-15,95;UBERON:0001049,1.27e-14,52;UBERON:0005068,1.27e-14,52;UBERON:0006241,1.27e-14,52;UBERON:0007135,1.27e-14,52;UBERON:0000955,1.26e-12,47;UBERON:0006238,1.26e-12,47;UBERON:0002346,2.53e-12,64;UBERON:0003075,2.53e-12,64;UBERON:0007284,2.53e-12,64;UBERON:0002616,2.78e-12,46;UBERON:0002020,3.55e-12,34;UBERON:0010371,1.27e-11,73;UBERON:0003080,7.25e-11,40;UBERON:0003528,1.59e-10,29;UBERON:0002791,1.59e-10,29;UBERON:0001893,1.59e-10,29;UBERON:0002780,1.81e-10,39;UBERON:0001890,1.81e-10,39;UBERON:0006240,1.81e-10,39;UBERON:0000956,1.33e-09,21;UBERON:0001869,1.33e-09,21;UBERON:0000203,1.33e-09,21;UBERON:0010314,5.96e-09,92;UBERON:0003056,2.10e-08,49;UBERON:0002619,2.97e-08,17;UBERON:0000160,6.60e-08,31;UBERON:0000344,1.05e-07,15;UBERON:0001242,3.42e-07,13;UBERON:0001262,3.42e-07,13;UBERON:0004786,3.42e-07,13;UBERON:0011216,3.96e-07,194;UBERON:0002021,4.50e-07,10;UBERON:0000411,4.50e-07,10;UBERON:0001950,4.50e-07,10|phase1_expression=16.8156289460034,38.0383194326904,32.7599452360466,50.8139874995474,43.0770327753859,21.4885468047219,17.0537227634734,0.258246646883153,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,1.33243904726265,1.41732687172878,0.699561878128147,0.315462165358238,0,0.42438965179803,8.33424243480484,0.695036658406197,0,19.3590831580022,15.3704218315004,20.0981187440257,14.6459078694085,18.0995835456147,30.4037471130198,24.4469225867133,11.7517170647311,0,1.84519436275371,0,20.2196133825892,12.3013637565284,23.2753066139101,0,0,0,0,1.36609096991689,0,20.0175940581168,21.8974171434151,21.4749700029167,7.82391344348039,14.3896603211095,16.2567775223509,11.665793944457,13.1587236327841,12.9377307928474,0,0.725362142011344,0.336093799142464,45.5349201783626,24.6418758347331,24.7522604293172,11.1274053472779,14.2827564403449,12.6766280701236,21.6860500524245,12.450127145556,5.39939830368839,5.93319817540185,4.2628806896766,20.6724076257699,20.3635701820424,19.0788886647599,17.010748229793,15.5640471400023,27.4224945027651,19.6573001446936,9.67677313798137,12.8432931164437,17.4651569455904,36.3382407297983,16.8547286272448,16.2822925251618,10.0233578674947,12.6252948171325,8.33461392890816,14.7966989470732,13.5063026407603,20.0165704587621,17.3830865429464,19.7896636310753,12.1159639786445,11.1317504199781,8.31287161174641,13.3337664802772,7.74381489283248,1.3599426674155,0,1.29955283489534,0.448026887097336,5.75822122540183,11.5892619353079,9.87186817490901,10.9535268098205,16.9012103732017,25.6652954828636,25.4805239706646,28.4426681261332,2.81438353314578,1.26679932737549,1.01104889002957,5.02409070763864,1.55362730188303,10.0940654564081,8.15381035800839,6.69824052286711,6.45723392316964,4.52167921657868,9.28950786372068,6.53466274914312,13.5957232253906,6.36237170447611,3.5384422077995,9.38247729694973,4.85851340612866,7.75800405016355,16.775258509631,17.2740670236813,14.8707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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269713 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0H8 | |||
|association_with_transcript=200bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end | |||
|cluster_id=chr5:135028009..135028103,- | |||
|description=CAGE_peak_1_at_Clip2_5end | |||
|id=chr5:135028009..135028103,- | |||
|ontology_enrichment_celltype=CL:0002321!1.69e-11!70;CL:0000220!1.69e-11!70;CL:0000055!2.92e-10!50;CL:0000393!1.69e-09!39;CL:0000211!1.69e-09!39;CL:0000221!3.47e-08!44;CL:0000133!3.47e-08!44;CL:0002319!6.56e-08!43;CL:0000540!7.40e-07!33;CL:0000047!7.40e-07!33;CL:0000031!7.40e-07!33;CL:0000404!7.40e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.63e-11,70;CL:0000393,1.67e-09,39;CL:0000211,1.67e-09,39;CL:0000221,3.44e-08,44;CL:0000133,3.44e-08,44;CL:0002319,6.50e-08,43;CL:0000540,7.34e-07,33;CL:0000047,7.34e-07,33;CL:0000031,7.34e-07,33;CL:0000404,7.34e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.75e-19!73;UBERON:0005743!2.75e-19!73;UBERON:0000073!4.74e-19!75;UBERON:0001016!4.74e-19!75;UBERON:0001049!1.29e-14!52;UBERON:0005068!1.29e-14!52;UBERON:0006241!1.29e-14!52;UBERON:0007135!1.29e-14!52;UBERON:0000955!7.82e-14!50;UBERON:0006238!7.82e-14!50;UBERON:0004121!1.61e-13!102;UBERON:0000924!1.61e-13!102;UBERON:0006601!1.61e-13!102;UBERON:0002616!1.76e-13!49;UBERON:0002020!3.60e-12!34;UBERON:0000033!4.14e-11!63;UBERON:0003080!7.34e-11!40;UBERON:0002791!1.61e-10!29;UBERON:0003528!1.61e-10!29;UBERON:0001893!1.61e-10!29;UBERON:0002346!1.63e-10!71;UBERON:0003075!1.63e-10!71;UBERON:0007284!1.63e-10!71;UBERON:0002780!1.83e-10!39;UBERON:0001890!1.83e-10!39;UBERON:0006240!1.83e-10!39;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0003056!2.12e-08!49;UBERON:0002619!3.00e-08!17;UBERON:0000344!1.06e-07!15;UBERON:0001242!3.45e-07!13;UBERON:0000060!3.45e-07!13;UBERON:0001262!3.45e-07!13;UBERON:0004786!3.45e-07!13;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.68e-19,73;UBERON:0001016,4.62e-19,75;UBERON:0000073,3.01e-15,54;UBERON:0004121,4.09e-15,95;UBERON:0000924,4.09e-15,95;UBERON:0006601,4.09e-15,95;UBERON:0001049,1.27e-14,52;UBERON:0005068,1.27e-14,52;UBERON:0006241,1.27e-14,52;UBERON:0007135,1.27e-14,52;UBERON:0000955,1.26e-12,47;UBERON:0006238,1.26e-12,47;UBERON:0002346,2.53e-12,64;UBERON:0003075,2.53e-12,64;UBERON:0007284,2.53e-12,64;UBERON:0002616,2.78e-12,46;UBERON:0002020,3.55e-12,34;UBERON:0010371,1.27e-11,73;UBERON:0003080,7.25e-11,40;UBERON:0003528,1.59e-10,29;UBERON:0002791,1.59e-10,29;UBERON:0001893,1.59e-10,29;UBERON:0002780,1.81e-10,39;UBERON:0001890,1.81e-10,39;UBERON:0006240,1.81e-10,39;UBERON:0000956,1.33e-09,21;UBERON:0001869,1.33e-09,21;UBERON:0000203,1.33e-09,21;UBERON:0010314,5.96e-09,92;UBERON:0003056,2.10e-08,49;UBERON:0002619,2.97e-08,17;UBERON:0000160,6.60e-08,31;UBERON:0000344,1.05e-07,15;UBERON:0001242,3.42e-07,13;UBERON:0001262,3.42e-07,13;UBERON:0004786,3.42e-07,13;UBERON:0011216,3.96e-07,194;UBERON:0002021,4.50e-07,10;UBERON:0000411,4.50e-07,10;UBERON:0001950,4.50e-07,10 | |||
|phase1_expression=16.8156289460034,38.0383194326904,32.7599452360466,50.8139874995474,43.0770327753859,21.4885468047219,17.0537227634734,0.258246646883153,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,1.33243904726265,1.41732687172878,0.699561878128147,0.315462165358238,0,0.42438965179803,8.33424243480484,0.695036658406197,0,19.3590831580022,15.3704218315004,20.0981187440257,14.6459078694085,18.0995835456147,30.4037471130198,24.4469225867133,11.7517170647311,0,1.84519436275371,0,20.2196133825892,12.3013637565284,23.2753066139101,0,0,0,0,1.36609096991689,0,20.0175940581168,21.8974171434151,21.4749700029167,7.82391344348039,14.3896603211095,16.2567775223509,11.665793944457,13.1587236327841,12.9377307928474,0,0.725362142011344,0.336093799142464,45.5349201783626,24.6418758347331,24.7522604293172,11.1274053472779,14.2827564403449,12.6766280701236,21.6860500524245,12.450127145556,5.39939830368839,5.93319817540185,4.2628806896766,20.6724076257699,20.3635701820424,19.0788886647599,17.010748229793,15.5640471400023,27.4224945027651,19.6573001446936,9.67677313798137,12.8432931164437,17.4651569455904,36.3382407297983,16.8547286272448,16.2822925251618,10.0233578674947,12.6252948171325,8.33461392890816,14.7966989470732,13.5063026407603,20.0165704587621,17.3830865429464,19.7896636310753,12.1159639786445,11.1317504199781,8.31287161174641,13.3337664802772,7.74381489283248,1.3599426674155,0,1.29955283489534,0.448026887097336,5.75822122540183,11.5892619353079,9.87186817490901,10.9535268098205,16.9012103732017,25.6652954828636,25.4805239706646,28.4426681261332,2.81438353314578,1.26679932737549,1.01104889002957,5.02409070763864,1.55362730188303,10.0940654564081,8.15381035800839,6.69824052286711,6.45723392316964,4.52167921657868,9.28950786372068,6.53466274914312,13.5957232253906,6.36237170447611,3.5384422077995,9.38247729694973,4.85851340612866,7.75800405016355,16.775258509631,17.2740670236813,14.8707161837553,22.9911349687732,2.87556298814209,2.39961092397363,2.1601938602421,20.2217363196511,21.9600289352941,20.1046963380583,25.0307021076878,27.872984849006,17.454195743003,21.415846724944,11.915205570487,8.08645308965605,3.79084137650512,27.7783249770146,2.08192708740326,4.59804208866946,3.78130472591233,6.63101198477146,7.27990540919208,6.14945857367279,8.4331552103756,13.4525752784288,2.37124792226126,7.37513712654495,12.6684809398043,10.9597866213787,11.9560317167007,7.66154766348766,8.43706759272568,8.7575077400137,0,0.772043721344145,1.70498099637356,3.72826390563903,4.22146907965973,5.22179978236943,4.97163944728941,5.70616272067471,6.17068451549513,4.65067889500816,6.17028823219124,6.30532848782715,9.37991144506839,9.19337798842933,9.48505071686512,9.64919917007193,10.5384055339704,11.541752013392,26.7068234676442,31.5917160004403,31.059365600477,12.4291766331866,2.34617075588757,4.87697010906921,6.31450560478257,8.26902450955704,9.33987784148455,8.17970192284004,22.302865892592,11.6936257854048,22.1174983744237,19.4977342600328,16.182019230887,24.268124033664,17.5071820398502,23.1003876975066,2.84501851429623,5.9409226557059,6.76246414038483,5.09128319613286,6.7883370508669,11.5724102819026,19.6033265085198,12.6944727262458,14.6008816892479,17.7691916047393,2.37162101669719,1.83529616287703,2.35870794135844,1.12431056192427,2.63718157805054,2.65294875727659,3.56476192493988,1.43848068725405,2.43202840162553,1.09824565275233,12.9391385874619,5.58211421502755,4.99260276983297,3.53610429125956,2.87035861635059,1.92977408545347,10.3461786493299,4.35830247072115,7.65935389277522,8.48725428875941,7.27539769694356,13.7355131102289,12.8543566078447,21.0744339686423,25.2216230569906,22.589398344175,25.3533082165404,10.3233888270915,12.7786886580763,12.43981903801,1.50791283939272,3.26343410291226,6.88469982226651,5.51873492609465,23.7614873181932,25.3177243039159,16.0656246469142,10.3513080153793,14.8288863125641,9.76096860741596,14.4333676480975,10.7535959078648,10.6943363559549,13.8707500086528,14.1683745586213,15.1973046113882,13.8350722281283,17.6726724031994,9.509985708954,11.0400674273698,12.8680697889325,11.5479086080775,10.619611067197,5.34117399540959,5.74414758233027,4.71512699389745,9.15435867930396,7.37844355065426,13.6966995379157,13.8142817201452,11.0514187299264,6.32073515871632,10.5418608574999,14.4389760547462,11.234506989875,2.88097750450096,6.98536892426874,10.7168517515796,10.4630737848941,14.9829806785739,13.3284706687718,17.0500371504176,11.9682571112492,16.522901527378,5.73373834942901,8.244312647074,10.333723308538,9.65006798850494,10.2660215842697,8.042904087508,19.5292160542,32.6348531538497,1.70870880797853,10.7321171340876,5.92622487583077,1.50694765603753,1.50363650493128,4.34678529092393,7.64902934972349,7.41742697315387,7.46279858543889,11.4560474161814,4.58687190692646,8.74273708645449,7.77638453916969,8.99079672862215,5.8957892211468,9.17077555416781,13.6378201946804,15.4436005770577,23.8491550856899,7.45607175704311,0,5.98066184175915,8.10746603239778,14.7782903141476,10.978584995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| |||
|short_description=p1@Clip2 | |||
}} |
Revision as of 09:41, 6 August 2015
Short description: | p1@Clip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clip2_5end |
Coexpression cluster: | NA |
Association with transcript: | 200bp_to_ENSMUST00000036999, ENSMUST00000100647, NM_001039162, NM_009990, uc008zwi.1, uc008zwj.1_5end |
EntrezGene: | 269713 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.63e-11 | 70 |
electrically responsive cell | 1.67e-09 | 39 |
electrically active cell | 1.67e-09 | 39 |
ectodermal cell | 3.44e-08 | 44 |
neurectodermal cell | 3.44e-08 | 44 |
neural cell | 6.50e-08 | 43 |
neuron | 7.34e-07 | 33 |
neuronal stem cell | 7.34e-07 | 33 |
neuroblast | 7.34e-07 | 33 |
electrically signaling cell | 7.34e-07 | 33 |